RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CNFNQ9BYD5 112 aa8.36□□□□□ -1.07
CSNK1D-219ENST00000581660 OSTCQ9NRP0 149 aa8.36□□□□□ -1.07
CSNK1D-219ENST00000581660 NTF3P20783 257 aa8.35□□□□□ -1.07
CSNK1D-219ENST00000581660 CLLU1Q5K131 121 aa8.35□□□□□ -1.07
CSNK1D-219ENST00000581660 RASL11AQ6T310 242 aa8.35□□□□□ -1.07
CSNK1D-219ENST00000581660 DIRC1Q969H9 104 aa8.35□□□□□ -1.07
CSNK1D-219ENST00000581660 TMEM243Q9BU79 118 aa8.35□□□□□ -1.07
CSNK1D-219ENST00000581660 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
CSNK1D-219ENST00000581660 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
CSNK1D-219ENST00000581660 K7EN84 100 aa8.34□□□□□ -1.07
CSNK1D-219ENST00000581660 MT-ND6P03923 174 aa8.34□□□□□ -1.07
CSNK1D-219ENST00000581660 CTRLP40313 264 aa8.34□□□□□ -1.07
CSNK1D-219ENST00000581660 TSKUQ8WUA8 353 aa8.33□□□□□ -1.08
CSNK1D-219ENST00000581660 KRTAP1-4P0C5Y4 121 aa8.32□□□□□ -1.08
CSNK1D-219ENST00000581660 PTTG1IPP53801 180 aa8.32□□□□□ -1.08
CSNK1D-219ENST00000581660 PNRC1Q12796 327 aaPredicted RBP8.32□□□□□ -1.08
CSNK1D-219ENST00000581660 UQCC3Q6UW78 93 aa8.32□□□□□ -1.08
CSNK1D-219ENST00000581660 RNASE7Q9H1E1 156 aaKnown RBP8.32□□□□□ -1.08
CSNK1D-219ENST00000581660 NIT2Q9NQR4 276 aa8.32□□□□□ -1.08
CSNK1D-219ENST00000581660 A0A1B0GW15 77 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 H0Y9J4 135 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 PPP1R2P9O14990 202 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 AMTP48728 403 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 TWIST1Q15672 202 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 RPL39LQ96EH5 51 aaKnown RBP8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
CSNK1D-219ENST00000581660 UBE2L6O14933 153 aa8.3□□□□□ -1.08
CSNK1D-219ENST00000581660 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
CSNK1D-219ENST00000581660 CHCHD10Q8WYQ3 142 aaPredicted RBP8.3□□□□□ -1.08
CSNK1D-219ENST00000581660 ISOC2Q96AB3 205 aa8.3□□□□□ -1.08
CSNK1D-219ENST00000581660 CARD19Q96LW7 228 aa8.3□□□□□ -1.08
CSNK1D-219ENST00000581660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 IGKV2-29A2NJV5 120 aaPredicted RBP8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 S100A8P05109 93 aa8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 RPL23P62829 140 aaKnown RBP8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 RIGQ13278 110 aa8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 COTL1Q14019 142 aa8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 NAT8BQ9UHF3 227 aa8.29□□□□□ -1.08
CSNK1D-219ENST00000581660 PPP1R17O96001 155 aa8.28□□□□□ -1.08
CSNK1D-219ENST00000581660 FOXI1Q12951 378 aa8.28□□□□□ -1.08
CSNK1D-219ENST00000581660 ADIRFQ15847 76 aa8.28□□□□□ -1.08
CSNK1D-219ENST00000581660 HIGD1CA8MV81 97 aa8.27□□□□□ -1.09
CSNK1D-219ENST00000581660 V9GYV3 84 aa8.27□□□□□ -1.09
CSNK1D-219ENST00000581660 MT-ND4LP03901 98 aa8.26□□□□□ -1.09
CSNK1D-219ENST00000581660 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
CSNK1D-219ENST00000581660 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 C9JQL5 133 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 UBE2D1P51668 147 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 SRSF3P84103 164 aaKnown RBP8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 AMMECR1LQ6DCA0 310 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 LINC00526Q96FQ7 95 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 TMEM191AQ9H0A3 160 aa8.25□□□□□ -1.09
CSNK1D-219ENST00000581660 SMIM27A0A1W2PRY6 76 aa8.24□□□□□ -1.09
CSNK1D-219ENST00000581660 FGF6P10767 208 aa8.24□□□□□ -1.09
CSNK1D-219ENST00000581660 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
CSNK1D-219ENST00000581660 SDHAF1A6NFY7 115 aa8.23□□□□□ -1.09
CSNK1D-219ENST00000581660 F8W036 122 aa8.23□□□□□ -1.09
CSNK1D-219ENST00000581660 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
CSNK1D-219ENST00000581660 ATP5L2Q7Z4Y8 100 aa8.23□□□□□ -1.09
CSNK1D-219ENST00000581660 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
CSNK1D-219ENST00000581660 CARHSP1Q9Y2V2 147 aaKnown RBP8.23□□□□□ -1.09
CSNK1D-219ENST00000581660 LINC00862A6NCI5 91 aa8.22□□□□□ -1.09
CSNK1D-219ENST00000581660 NCR2O95944 276 aa8.22□□□□□ -1.09
CSNK1D-219ENST00000581660 APCSP02743 223 aa8.22□□□□□ -1.09
CSNK1D-219ENST00000581660 XCL1P47992 114 aa8.22□□□□□ -1.09
CSNK1D-219ENST00000581660 IFITM2Q01629 132 aa8.22□□□□□ -1.09
CSNK1D-219ENST00000581660 NUP35Q8NFH5 326 aa8.22□□□□□ -1.09
CSNK1D-219ENST00000581660 TRBV6-5A0A0K0K1A5 114 aa8.21□□□□□ -1.1
CSNK1D-219ENST00000581660 TMEM218A2RU14 115 aa8.21□□□□□ -1.1
CSNK1D-219ENST00000581660 IMMP2LQ96T52 175 aa8.21□□□□□ -1.1
CSNK1D-219ENST00000581660 SEC11CQ9BY50 192 aa8.21□□□□□ -1.1
CSNK1D-219ENST00000581660 CTDSP1Q9GZU7 261 aa8.21□□□□□ -1.1
CSNK1D-219ENST00000581660 H7C423 109 aa8.2□□□□□ -1.1
CSNK1D-219ENST00000581660 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
CSNK1D-219ENST00000581660 TCAPO15273 167 aa8.2□□□□□ -1.1
CSNK1D-219ENST00000581660 TSHBP01222 138 aa8.2□□□□□ -1.1
CSNK1D-219ENST00000581660 CAMPP49913 170 aa8.2□□□□□ -1.1
CSNK1D-219ENST00000581660 TMEM242Q9NWH2 141 aa8.2□□□□□ -1.1
CSNK1D-219ENST00000581660 LINC00959A0A1B0GUT2 108 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 I3L3M4 83 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 CCL25O15444 150 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 TSPAN13O95857 204 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 PPBPP02775 128 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 PMCHP20382 165 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 HBBP68871 147 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 SMAGPQ0VAQ4 97 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 OR5A1Q8NGJ0 315 aa8.19□□□□□ -1.1
CSNK1D-219ENST00000581660 TRAV9-1A0A075B6T8 112 aa8.18□□□□□ -1.1
CSNK1D-219ENST00000581660 A0A087WZ39 114 aa8.18□□□□□ -1.1
CSNK1D-219ENST00000581660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms