RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 IGIPA6NJ69 53 aa10.57□□□□□ -0.72
SS18-216ENST00000580751 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.57□□□□□ -0.72
SS18-216ENST00000580751 AKR1D1P51857 326 aa10.57□□□□□ -0.72
SS18-216ENST00000580751 Q6ZR54 194 aa10.57□□□□□ -0.72
SS18-216ENST00000580751 SPATA12Q7Z6I5 190 aa10.57□□□□□ -0.72
SS18-216ENST00000580751 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
SS18-216ENST00000580751 MAP1LC3CQ9BXW4 147 aa10.57□□□□□ -0.72
SS18-216ENST00000580751 M0R2N4 97 aa10.56□□□□□ -0.72
SS18-216ENST00000580751 UBE2L6O14933 153 aa10.56□□□□□ -0.72
SS18-216ENST00000580751 LINC01556Q5JQF7 62 aa10.56□□□□□ -0.72
SS18-216ENST00000580751 IFI27L1Q96BM0 104 aa10.56□□□□□ -0.72
SS18-216ENST00000580751 MRPS36P82909 103 aaKnown RBP10.55□□□□□ -0.72
SS18-216ENST00000580751 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
SS18-216ENST00000580751 UBE2D4Q9Y2X8 147 aa10.55□□□□□ -0.72
SS18-216ENST00000580751 A0A1B0GUV1 79 aa10.54□□□□□ -0.72
SS18-216ENST00000580751 LOC105371267A0A1B0GV96 52 aa10.54□□□□□ -0.72
SS18-216ENST00000580751 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
SS18-216ENST00000580751 OR10D4PQ8NGN7 298 aa10.54□□□□□ -0.72
SS18-216ENST00000580751 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
SS18-216ENST00000580751 FGF6P10767 208 aa10.53□□□□□ -0.72
SS18-216ENST00000580751 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
SS18-216ENST00000580751 DGAT2L7PQ6IED9 249 aa10.53□□□□□ -0.72
SS18-216ENST00000580751 Q6ZN92 141 aa10.53□□□□□ -0.72
SS18-216ENST00000580751 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
SS18-216ENST00000580751 CHCHD5Q9BSY4 110 aa10.53□□□□□ -0.72
SS18-216ENST00000580751 KRTAP1-5Q9BYS1 174 aa10.53□□□□□ -0.72
SS18-216ENST00000580751 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.52□□□□□ -0.73
SS18-216ENST00000580751 A0A087WX48 190 aa10.52□□□□□ -0.73
SS18-216ENST00000580751 IGKV2-29A2NJV5 120 aaPredicted RBP10.52□□□□□ -0.73
SS18-216ENST00000580751 SYS1-DBNDD2H3BUS1 97 aa10.52□□□□□ -0.73
SS18-216ENST00000580751 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
SS18-216ENST00000580751 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
SS18-216ENST00000580751 C20orf202A1L168 122 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 IGHV3-30P01768 117 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 PRSS1P07477 247 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 C3orf79P0CE67 100 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 IGHV3-30-3P0DP02 117 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 IGHV3-30-5P0DP03 117 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 OR5A1Q8NGJ0 315 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 DEFB104AQ8WTQ1 72 aa10.51□□□□□ -0.73
SS18-216ENST00000580751 IGLV4-3A0A075B6K6 122 aa10.5□□□□□ -0.73
SS18-216ENST00000580751 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
SS18-216ENST00000580751 KRTDAPP60985 99 aa10.5□□□□□ -0.73
SS18-216ENST00000580751 PMVKQ15126 192 aa10.5□□□□□ -0.73
SS18-216ENST00000580751 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
SS18-216ENST00000580751 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
SS18-216ENST00000580751 VCX2Q9H322 139 aa10.5□□□□□ -0.73
SS18-216ENST00000580751 JOSD1Q15040 202 aaPredicted RBP10.49□□□□□ -0.73
SS18-216ENST00000580751 LINC00173Q6ZV60 143 aa10.49□□□□□ -0.73
SS18-216ENST00000580751 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
SS18-216ENST00000580751 AMELXQ99217 191 aa10.49□□□□□ -0.73
SS18-216ENST00000580751 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
SS18-216ENST00000580751 GAGE6Q13070 117 aa10.48□□□□□ -0.73
SS18-216ENST00000580751 TEX43Q6ZNM6 134 aa10.48□□□□□ -0.73
SS18-216ENST00000580751 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
SS18-216ENST00000580751 Q8N3U1 123 aa10.48□□□□□ -0.73
SS18-216ENST00000580751 C2orf88Q9BSF0 95 aa10.48□□□□□ -0.73
SS18-216ENST00000580751 DNAH2Q9P225 4427 aa10.48□□□□□ -0.73
SS18-216ENST00000580751 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
SS18-216ENST00000580751 CCL25O15444 150 aa10.47□□□□□ -0.73
SS18-216ENST00000580751 RBX1P62877 108 aa10.47□□□□□ -0.73
SS18-216ENST00000580751 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
SS18-216ENST00000580751 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
SS18-216ENST00000580751 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
SS18-216ENST00000580751 CST9LQ9H4G1 147 aa10.47□□□□□ -0.73
SS18-216ENST00000580751 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
SS18-216ENST00000580751 PRSS29PA6NIE9 313 aa10.45□□□□□ -0.74
SS18-216ENST00000580751 SEC11AP67812 179 aa10.45□□□□□ -0.74
SS18-216ENST00000580751 ODF1Q14990 250 aa10.45□□□□□ -0.74
SS18-216ENST00000580751 LINC00336Q6ZUF6 198 aa10.45□□□□□ -0.74
SS18-216ENST00000580751 F8VRH5 84 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 RTL8CO15255 209 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 SMIM6P0DI80 62 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 PLNP26678 52 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 Q6ZUT4 128 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 Q8N976 141 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 DNAH10Q8IVF4 4471 aa10.44□□□□□ -0.74
SS18-216ENST00000580751 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
SS18-216ENST00000580751 SCGB1D1O95968 90 aa10.43□□□□□ -0.74
SS18-216ENST00000580751 CRPP02741 224 aa10.43□□□□□ -0.74
SS18-216ENST00000580751 ANGP03950 147 aaKnown RBP10.43□□□□□ -0.74
SS18-216ENST00000580751 CHTOPQ9Y3Y2 248 aaKnown RBP10.43□□□□□ -0.74
SS18-216ENST00000580751 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
SS18-216ENST00000580751 PYY3Q5JQD4 70 aa10.42□□□□□ -0.74
SS18-216ENST00000580751 OPRPNQ99935 248 aaPredicted RBP10.42□□□□□ -0.74
SS18-216ENST00000580751 Q9HAA7 133 aa10.42□□□□□ -0.74
SS18-216ENST00000580751 DPM2O94777 84 aa10.41□□□□□ -0.74
SS18-216ENST00000580751 UBE2D1P51668 147 aa10.41□□□□□ -0.74
SS18-216ENST00000580751 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
SS18-216ENST00000580751 RMI2Q96E14 147 aa10.41□□□□□ -0.74
SS18-216ENST00000580751 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
SS18-216ENST00000580751 TINCRA0A1B0GVN0 87 aa10.4□□□□□ -0.74
SS18-216ENST00000580751 H0Y8G0 127 aa10.4□□□□□ -0.74
SS18-216ENST00000580751 IGLC3P0DOY3 106 aa10.4□□□□□ -0.74
SS18-216ENST00000580751 Q6ZRN7 208 aaPredicted RBP10.4□□□□□ -0.74
SS18-216ENST00000580751 MRPL35Q9NZE8 188 aaKnown RBP10.4□□□□□ -0.74
SS18-216ENST00000580751 FRAS1Q86XX4 4008 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms