RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 IGHV1-24A0A0C4DH33 117 aa5.5□□□□□ -1.53
COPS3-215ENST00000578317 C3orf84H3BNL1 204 aa5.5□□□□□ -1.53
COPS3-215ENST00000578317 H7C423 109 aa5.5□□□□□ -1.53
COPS3-215ENST00000578317 SERF1AO75920 110 aa5.5□□□□□ -1.53
COPS3-215ENST00000578317 NDUFA6P56556 154 aa5.5□□□□□ -1.53
COPS3-215ENST00000578317 C20orf203Q8NBC4 194 aa5.5□□□□□ -1.53
COPS3-215ENST00000578317 PACRGQ96M98 296 aaPredicted RBP5.5□□□□□ -1.53
COPS3-215ENST00000578317 CHCHD7Q9BUK0 85 aa5.5□□□□□ -1.53
COPS3-215ENST00000578317 NUPR1O60356 82 aa5.49□□□□□ -1.53
COPS3-215ENST00000578317 HSBP1O75506 76 aa5.49□□□□□ -1.53
COPS3-215ENST00000578317 S100A6P06703 90 aa5.49□□□□□ -1.53
COPS3-215ENST00000578317 AMTP48728 403 aa5.49□□□□□ -1.53
COPS3-215ENST00000578317 TMEM18Q96B42 140 aa5.49□□□□□ -1.53
COPS3-215ENST00000578317 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
COPS3-215ENST00000578317 A0A096LNJ9 63 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 C5orf52A6NGY3 159 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 CCL18P55774 89 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 PKIAP61925 76 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 RNASEKQ6P5S7 137 aaKnown RBP5.48□□□□□ -1.53
COPS3-215ENST00000578317 TOMM6Q96B49 74 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 TMEM243Q9BU79 118 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 TIMM21Q9BVV7 248 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 PYGO1Q9Y3Y4 419 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 CSDC2Q9Y534 153 aaKnown RBP5.48□□□□□ -1.53
COPS3-215ENST00000578317 LYSTQ99698 3801 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 TRAV8-6A0A0B4J262 113 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 A0A1B0GUV1 79 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 HBDP02042 147 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 SMAGPQ0VAQ4 97 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 CASC10Q5T4H9 136 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 MRPL52Q86TS9 123 aaKnown RBP5.48□□□□□ -1.53
COPS3-215ENST00000578317 CYSLTR1Q9Y271 337 aa5.48□□□□□ -1.53
COPS3-215ENST00000578317 MRPS16Q9Y3D3 137 aaKnown RBP5.48□□□□□ -1.53
COPS3-215ENST00000578317 IGIPA6NJ69 53 aa5.47□□□□□ -1.53
COPS3-215ENST00000578317 PDZD11Q5EBL8 140 aa5.47□□□□□ -1.53
COPS3-215ENST00000578317 ZFAND6Q6FIF0 208 aa5.47□□□□□ -1.53
COPS3-215ENST00000578317 C2orf66Q6UXQ4 117 aa5.47□□□□□ -1.53
COPS3-215ENST00000578317 ERASQ7Z444 233 aa5.47□□□□□ -1.53
COPS3-215ENST00000578317 DEFB104AQ8WTQ1 72 aa5.47□□□□□ -1.53
COPS3-215ENST00000578317 LINC00588Q9Y4M8 146 aa5.47□□□□□ -1.53
COPS3-215ENST00000578317 SACSQ9NZJ4 4579 aa5.46□□□□□ -1.54
COPS3-215ENST00000578317 ZNF25P17030 456 aaPredicted RBP5.46□□□□□ -1.54
COPS3-215ENST00000578317 SNRPEP62304 92 aaKnown RBP5.46□□□□□ -1.54
COPS3-215ENST00000578317 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
COPS3-215ENST00000578317 HIST3H2BBQ8N257 126 aa5.46□□□□□ -1.54
COPS3-215ENST00000578317 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
COPS3-215ENST00000578317 CHCHD5Q9BSY4 110 aa5.46□□□□□ -1.54
COPS3-215ENST00000578317 SPANXA1Q9NS26 97 aa5.46□□□□□ -1.54
COPS3-215ENST00000578317 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.54
COPS3-215ENST00000578317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.45□□□□□ -1.54
COPS3-215ENST00000578317 IGKV2-29A2NJV5 120 aaPredicted RBP5.45□□□□□ -1.54
COPS3-215ENST00000578317 K7EP13 123 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 UBE2L6O14933 153 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 ATP5LO75964 103 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 FGF6P10767 208 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 RPL39P62891 51 aaKnown RBP5.45□□□□□ -1.54
COPS3-215ENST00000578317 MRPS36P82909 103 aaKnown RBP5.45□□□□□ -1.54
COPS3-215ENST00000578317 FAM19A2Q8N3H0 131 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 TMEM141Q96I45 108 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 A0A087WX48 190 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 TMEM262E9PQX1 116 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 LEPROTL1O95214 131 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 PMCHL1Q16048 86 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 LINC01556Q5JQF7 62 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 PAPPA-AS1Q5QFB9 102 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 LGALS9CQ6DKI2 356 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 PET117Q6UWS5 81 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 FAM104AQ969W3 186 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 SCGB3A1Q96QR1 104 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 HSPB8Q9UJY1 196 aa5.45□□□□□ -1.54
COPS3-215ENST00000578317 DNAH2Q9P225 4427 aa5.44□□□□□ -1.54
COPS3-215ENST00000578317 RBX1P62877 108 aa5.44□□□□□ -1.54
COPS3-215ENST00000578317 GAGE6Q13070 117 aa5.44□□□□□ -1.54
COPS3-215ENST00000578317 TMEM101Q96IK0 257 aa5.44□□□□□ -1.54
COPS3-215ENST00000578317 Q9H8V8 135 aa5.44□□□□□ -1.54
COPS3-215ENST00000578317 KMT2CQ8NEZ4 4911 aaKnown RBP5.43□□□□□ -1.54
COPS3-215ENST00000578317 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.43□□□□□ -1.54
COPS3-215ENST00000578317 SIVA1O15304 175 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 S100A2P29034 98 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 MPV17L2Q567V2 206 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 AMMECR1LQ6DCA0 310 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 WFDC10BQ8IUB3 73 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 ZNF664Q8N3J9 261 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 OR5A1Q8NGJ0 315 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 HIST1H2BLQ99880 126 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
COPS3-215ENST00000578317 IGLV4-60A0A075B6I1 120 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 TRAV9-2A0A087WT02 112 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 IFITM10A6NMD0 228 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 VPREB1P12018 145 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 SPATA12Q7Z6I5 190 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 Q8N976 141 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 IFI27L1Q96BM0 104 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 AMELXQ99217 191 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 VCX2Q9H322 139 aa5.42□□□□□ -1.54
COPS3-215ENST00000578317 PRR34Q9NV39 138 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms