RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, human

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCFC1R1-209	ENST00000576921	HBB	P68871	147 aa		13.62	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	CFAP161	Q6P656	301 aa		13.62	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	PPP1R2P9	O14990	202 aa		13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	S100A8	P05109	93 aa		13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	CKS2	P33552	79 aa		13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	XCL1	P47992	114 aa		13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	HIGD2B	Q4VC39	106 aa		13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	KIR2DL4	Q99706	377 aa		13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.61	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	MRPL52	Q86TS9	123 aa	Known RBP	13.6	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.6	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	IGHV3-64	A0A075B6Q5	118 aa		13.59	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	LINC00959	A0A1B0GUT2	108 aa		13.59	□□□□□ -0.23
HCFC1R1-209	ENST00000576921		F8W036	122 aa		13.59	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	CCL25	O15444	150 aa		13.59	□□□□□ -0.23
HCFC1R1-209	ENST00000576921	SLPI	P03973	132 aa		13.59	□□□□□ -0.23
HCFC1R1-209	ENST00000576921		A0A1B0GXF2	115 aa		13.58	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	LINC00862	A6NCI5	91 aa		13.58	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	FOXI1	Q12951	378 aa		13.58	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	SDIM1	Q6ZPB5	146 aa		13.58	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	CDC42SE2	Q9NRR3	84 aa		13.58	□□□□□ -0.24
HCFC1R1-209	ENST00000576921		D6R8Y8	96 aa		13.57	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	PANO1	I0J062	215 aa		13.57	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	SS18	Q15532	418 aa		13.57	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	ZNF664	Q8N3J9	261 aa		13.57	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	TNFRSF6B	O95407	300 aa		13.56	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	C20orf78	Q9BR46	151 aa		13.56	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	SMAGP	Q0VAQ4	97 aa		13.55	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	PNRC1	Q12796	327 aa	Predicted RBP	13.55	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	RNASE13	Q5GAN3	156 aa	Known RBP	13.55	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	UBE2D4	Q9Y2X8	147 aa		13.55	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	TRBV24-1	A0A075B6N3	115 aa		13.54	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	ATP5L2	Q7Z4Y8	100 aa		13.54	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	SMIM2	Q9BVW6	85 aa		13.54	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.53	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	NPY	P01303	97 aa		13.53	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	TMEM18	Q96B42	140 aa		13.53	□□□□□ -0.24
HCFC1R1-209	ENST00000576921	CHTF8	P0CG12	524 aa		13.52	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	RPL32	P62910	135 aa	Known RBP	13.52	□□□□□ -0.25
HCFC1R1-209	ENST00000576921		Q6ZUT4	128 aa		13.52	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	DPH3	Q96FX2	82 aa		13.52	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	HERC1	Q15751	4861 aa		13.51	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	MT-ND4L	P03901	98 aa		13.51	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	RPL37A	P61513	92 aa	Known RBP	13.51	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	CLLU1	Q5K131	121 aa		13.51	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	CD164L2	Q6UWJ8	174 aa		13.51	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	CSDC2	Q9Y534	153 aa	Known RBP	13.51	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	IGHV1-58	A0A0C4DH39	117 aa		13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	TCAP	O15273	167 aa		13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	PPBP	P02775	128 aa		13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	KRTAP10-4	P60372	401 aa	Predicted RBP	13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	RPL39	P62891	51 aa	Known RBP	13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	ORMDL3	Q8N138	153 aa		13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	ANAPC16	Q96DE5	110 aa		13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	LINC00526	Q96FQ7	95 aa		13.5	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	TRAV13-1	A0A0B4J241	112 aa		13.49	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	COX6A2	Q02221	97 aa		13.49	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	PHOX2A	O14813	284 aa		13.48	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	CIRBP	Q14011	172 aa	Known RBP	13.48	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	SPACA4	Q8TDM5	124 aa		13.48	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	PRELID3A	Q96N28	172 aa		13.48	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	TIMM21	Q9BVV7	248 aa		13.48	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	C1orf196	B1AJZ1	125 aa		13.47	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	TMEM136	Q6ZRR5	245 aa		13.47	□□□□□ -0.25
HCFC1R1-209	ENST00000576921		A0A087WYN8	130 aa		13.46	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	IGKV2-24	A0A0C4DH68	120 aa		13.46	□□□□□ -0.25
HCFC1R1-209	ENST00000576921		J3QL48	77 aa		13.46	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	MAL	P21145	153 aa		13.46	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	PRSS3P2	Q8NHM4	247 aa		13.46	□□□□□ -0.25
HCFC1R1-209	ENST00000576921	ZNF561-AS1	K7EIQ3	104 aa		13.45	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	COX7A2L	O14548	114 aa		13.45	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	RAB5A	P20339	215 aa		13.44	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	CARD19	Q96LW7	228 aa		13.44	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	IFITM2	Q01629	132 aa		13.43	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	MAJIN	Q3KP22	176 aa		13.43	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	SPANXA1	Q9NS26	97 aa		13.43	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	LOC389332	A0A1B0GUA5	103 aa		13.42	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	OPRPN	Q99935	248 aa	Predicted RBP	13.42	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	ADCYAP1	P18509	176 aa		13.41	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	UQCC3	Q6UW78	93 aa		13.41	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	C5orf38	Q86SI9	138 aa		13.41	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	MAP1LC3A	Q9H492	121 aa		13.41	□□□□□ -0.26
HCFC1R1-209	ENST00000576921		A0A096LNI7	61 aa		13.4	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	SYCN	Q0VAF6	134 aa		13.4	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	LAMTOR2	Q9Y2Q5	125 aa		13.4	□□□□□ -0.26
HCFC1R1-209	ENST00000576921	IGLV4-69	A0A075B6H9	119 aa		13.39	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	IFITM10	A6NMD0	228 aa		13.39	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	FAM104A	Q969W3	186 aa		13.39	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	PLAC8	Q9NZF1	115 aa		13.39	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	PKIG	Q9Y2B9	76 aa		13.39	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	TMEM218	A2RU14	115 aa		13.38	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.38	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	IFI27	P40305	119 aa	Predicted RBP	13.38	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	MRPS36	P82909	103 aa	Known RBP	13.38	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	APOM	O95445	188 aa		13.37	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	HNRNPA3	P51991	378 aa	Known RBP	13.37	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	STPG4	Q8N801	248 aa		13.37	□□□□□ -0.27
HCFC1R1-209	ENST00000576921		Q6ZRU5	148 aa		13.36	□□□□□ -0.27
HCFC1R1-209	ENST00000576921	C7orf33	Q8WU49	177 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms