RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 HIST2H2BDQ6DRA6 164 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 C4orf3Q8WVX3 66 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 GAGE2DQ9UEU5 116 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 SS18L2Q9UHA2 77 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 IGHV4-31P0DP07 118 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 XCL2Q9UBD3 114 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 CIRBPQ14011 172 aaKnown RBP12.39□□□□□ -0.43
TOM1L1-221ENST00000575882 DEFB114Q30KQ6 69 aa12.39□□□□□ -0.43
TOM1L1-221ENST00000575882 Q9H8V8 135 aa12.39□□□□□ -0.43
TOM1L1-221ENST00000575882 LINC00242Q5T6M2 205 aa12.38□□□□□ -0.43
TOM1L1-221ENST00000575882 Q8N2B8 174 aa12.38□□□□□ -0.43
TOM1L1-221ENST00000575882 HERVK_113P63121 156 aa12.38□□□□□ -0.43
TOM1L1-221ENST00000575882 ZNF625Q96I27 306 aaPredicted RBP12.38□□□□□ -0.43
TOM1L1-221ENST00000575882 CITED2Q99967 270 aaPredicted RBP12.38□□□□□ -0.43
TOM1L1-221ENST00000575882 ANKRD17O75179 2603 aaKnown RBP12.37□□□□□ -0.43
TOM1L1-221ENST00000575882 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
TOM1L1-221ENST00000575882 LINC00308Q8TCZ7 52 aa12.37□□□□□ -0.43
TOM1L1-221ENST00000575882 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
TOM1L1-221ENST00000575882 A0A0U1RRA0 63 aa12.37□□□□□ -0.43
TOM1L1-221ENST00000575882 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
TOM1L1-221ENST00000575882 MXRA5Q9NR99 2828 aa12.36□□□□□ -0.43
TOM1L1-221ENST00000575882 NDUFA7O95182 113 aa12.36□□□□□ -0.43
TOM1L1-221ENST00000575882 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
TOM1L1-221ENST00000575882 POLQO75417 2590 aa12.35□□□□□ -0.43
TOM1L1-221ENST00000575882 NHLRC4P0CG21 123 aaPredicted RBP12.35□□□□□ -0.43
TOM1L1-221ENST00000575882 GAGE5Q13069 117 aa12.35□□□□□ -0.43
TOM1L1-221ENST00000575882 GAGE6Q13070 117 aa12.35□□□□□ -0.43
TOM1L1-221ENST00000575882 TRAV13-1A0A0B4J241 112 aa12.34□□□□□ -0.43
TOM1L1-221ENST00000575882 NDUFV3P56181 108 aaKnown RBP12.34□□□□□ -0.43
TOM1L1-221ENST00000575882 ODF3L2Q3SX64 289 aa12.34□□□□□ -0.43
TOM1L1-221ENST00000575882 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
TOM1L1-221ENST00000575882 SMIM1B2RUZ4 78 aa12.34□□□□□ -0.43
TOM1L1-221ENST00000575882 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
TOM1L1-221ENST00000575882 STHQ8IWL8 128 aa12.33□□□□□ -0.44
TOM1L1-221ENST00000575882 FBN2P35556 2912 aa12.33□□□□□ -0.44
TOM1L1-221ENST00000575882 Q6Q795 121 aa12.33□□□□□ -0.44
TOM1L1-221ENST00000575882 RPL36AP83881 106 aaKnown RBP12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 NTM-AS1Q6ZSK4 140 aa12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 RPL36ALQ969Q0 106 aaKnown RBP12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 K7EQD1 137 aa12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
TOM1L1-221ENST00000575882 DEFB121Q5J5C9 76 aa12.31□□□□□ -0.44
TOM1L1-221ENST00000575882 FAM19A3Q7Z5A8 133 aa12.31□□□□□ -0.44
TOM1L1-221ENST00000575882 Q6ZTI0 123 aa12.31□□□□□ -0.44
TOM1L1-221ENST00000575882 PRIMA1Q86XR5 153 aa12.31□□□□□ -0.44
TOM1L1-221ENST00000575882 CSDC2Q9Y534 153 aaKnown RBP12.31□□□□□ -0.44
TOM1L1-221ENST00000575882 CR1P17927 2039 aa12.3□□□□□ -0.44
TOM1L1-221ENST00000575882 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
TOM1L1-221ENST00000575882 MYO18BQ8IUG5 2567 aa12.3□□□□□ -0.44
TOM1L1-221ENST00000575882 FAM240AA0A1B0GVK7 77 aa12.3□□□□□ -0.44
TOM1L1-221ENST00000575882 DAZ2Q13117 558 aaKnown RBP12.3□□□□□ -0.44
TOM1L1-221ENST00000575882 DAZ4Q86SG3 579 aaKnown RBP12.3□□□□□ -0.44
TOM1L1-221ENST00000575882 DAZ3Q9NR90 486 aaKnown RBP12.3□□□□□ -0.44
TOM1L1-221ENST00000575882 TRBV10-1A0A0K0K1A3 114 aa12.29□□□□□ -0.44
TOM1L1-221ENST00000575882 COX7A2LO14548 114 aa12.29□□□□□ -0.44
TOM1L1-221ENST00000575882 COPS9Q8WXC6 57 aa12.29□□□□□ -0.44
TOM1L1-221ENST00000575882 FAM110AQ9BQ89 295 aa12.29□□□□□ -0.44
TOM1L1-221ENST00000575882 GAGE12JA6NER3 117 aa12.29□□□□□ -0.44
TOM1L1-221ENST00000575882 B5MCH6 92 aa12.29□□□□□ -0.44
TOM1L1-221ENST00000575882 GAGE4Q13068 117 aa12.29□□□□□ -0.44
TOM1L1-221ENST00000575882 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
TOM1L1-221ENST00000575882 F5H768 121 aa12.28□□□□□ -0.44
TOM1L1-221ENST00000575882 MRPL23Q16540 153 aaKnown RBP12.28□□□□□ -0.44
TOM1L1-221ENST00000575882 PIEZO1Q92508 2521 aa12.27□□□□□ -0.44
TOM1L1-221ENST00000575882 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
TOM1L1-221ENST00000575882 HERV-K104P63124 156 aa12.27□□□□□ -0.45
TOM1L1-221ENST00000575882 ACACBO00763 2458 aa12.26□□□□□ -0.45
TOM1L1-221ENST00000575882 MYO9AB2RTY4 2548 aa12.26□□□□□ -0.45
TOM1L1-221ENST00000575882 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
TOM1L1-221ENST00000575882 C11orf44Q8N8P7 122 aa12.26□□□□□ -0.45
TOM1L1-221ENST00000575882 A0A1W2PRX2 142 aa12.26□□□□□ -0.45
TOM1L1-221ENST00000575882 NOP10Q9NPE3 64 aaKnown RBP12.24□□□□□ -0.45
TOM1L1-221ENST00000575882 UBE2L6O14933 153 aa12.24□□□□□ -0.45
TOM1L1-221ENST00000575882 Q96MF0 132 aa12.24□□□□□ -0.45
TOM1L1-221ENST00000575882 CCDC179H3BU77 68 aa12.23□□□□□ -0.45
TOM1L1-221ENST00000575882 GAGE7O76087 117 aa12.23□□□□□ -0.45
TOM1L1-221ENST00000575882 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
TOM1L1-221ENST00000575882 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
TOM1L1-221ENST00000575882 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
TOM1L1-221ENST00000575882 CENPEQ02224 2701 aa12.23□□□□□ -0.45
TOM1L1-221ENST00000575882 FAM208BQ5VWN6 2430 aa12.23□□□□□ -0.45
TOM1L1-221ENST00000575882 DEFB113Q30KQ7 82 aa12.22□□□□□ -0.45
TOM1L1-221ENST00000575882 TMEM243Q9BU79 118 aa12.22□□□□□ -0.45
TOM1L1-221ENST00000575882 TEX15Q9BXT5 2789 aa12.22□□□□□ -0.45
TOM1L1-221ENST00000575882 PRB1P04280 392 aa12.22□□□□□ -0.45
TOM1L1-221ENST00000575882 CACNA1AO00555 2505 aa12.21□□□□□ -0.46
TOM1L1-221ENST00000575882 CCL24O00175 119 aa12.2□□□□□ -0.46
TOM1L1-221ENST00000575882 TRACP01848 142 aa12.2□□□□□ -0.46
TOM1L1-221ENST00000575882 CHD6Q8TD26 2715 aa12.2□□□□□ -0.46
TOM1L1-221ENST00000575882 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
TOM1L1-221ENST00000575882 LOC100131303A0A0U1RQF7 123 aa12.19□□□□□ -0.46
TOM1L1-221ENST00000575882 SMIM20Q8N5G0 67 aa12.19□□□□□ -0.46
TOM1L1-221ENST00000575882 FAM218AQ96MZ4 157 aa12.19□□□□□ -0.46
TOM1L1-221ENST00000575882 TRGV2A0A075B6R0 118 aa12.18□□□□□ -0.46
TOM1L1-221ENST00000575882 TRBV7-7A0A0K0K1E9 115 aa12.18□□□□□ -0.46
TOM1L1-221ENST00000575882 ACYP1P07311 99 aa12.18□□□□□ -0.46
TOM1L1-221ENST00000575882 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms