RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 XCL1P47992 114 aa12.17□□□□□ -0.46
HCFC1R1-204ENST00000573095 MRPL52Q86TS9 123 aaKnown RBP12.17□□□□□ -0.46
HCFC1R1-204ENST00000573095 LINC01551Q86U37 167 aa12.17□□□□□ -0.46
HCFC1R1-204ENST00000573095 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
HCFC1R1-204ENST00000573095 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
HCFC1R1-204ENST00000573095 CCL25O15444 150 aa12.16□□□□□ -0.46
HCFC1R1-204ENST00000573095 PKIGQ9Y2B9 76 aa12.16□□□□□ -0.46
HCFC1R1-204ENST00000573095 A0A096LNI7 61 aa12.15□□□□□ -0.46
HCFC1R1-204ENST00000573095 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
HCFC1R1-204ENST00000573095 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
HCFC1R1-204ENST00000573095 POLR2KP53803 58 aaKnown RBP12.15□□□□□ -0.46
HCFC1R1-204ENST00000573095 STPG4Q8N801 248 aa12.15□□□□□ -0.46
HCFC1R1-204ENST00000573095 OSTCQ9NRP0 149 aa12.15□□□□□ -0.46
HCFC1R1-204ENST00000573095 C7orf77A4D0Y5 90 aa12.14□□□□□ -0.47
HCFC1R1-204ENST00000573095 PRR3P79522 188 aaKnown RBP12.14□□□□□ -0.47
HCFC1R1-204ENST00000573095 RAB4AP20338 218 aa12.13□□□□□ -0.47
HCFC1R1-204ENST00000573095 SS18Q15532 418 aa12.13□□□□□ -0.47
HCFC1R1-204ENST00000573095 AMN1Q8IY45 258 aa12.13□□□□□ -0.47
HCFC1R1-204ENST00000573095 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
HCFC1R1-204ENST00000573095 EIF5A2Q9GZV4 153 aaKnown RBP12.13□□□□□ -0.47
HCFC1R1-204ENST00000573095 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
HCFC1R1-204ENST00000573095 LINC00474Q9P2X8 69 aa12.13□□□□□ -0.47
HCFC1R1-204ENST00000573095 ZNF727A8MUV8 499 aa12.12□□□□□ -0.47
HCFC1R1-204ENST00000573095 CD164L2Q6UWJ8 174 aa12.12□□□□□ -0.47
HCFC1R1-204ENST00000573095 UBR4Q5T4S7 5183 aa12.12□□□□□ -0.47
HCFC1R1-204ENST00000573095 ZNF664Q8N3J9 261 aa12.11□□□□□ -0.47
HCFC1R1-204ENST00000573095 LINC00526Q96FQ7 95 aa12.11□□□□□ -0.47
HCFC1R1-204ENST00000573095 SRP19P09132 144 aaKnown RBP12.1□□□□□ -0.47
HCFC1R1-204ENST00000573095 V9GYV3 84 aa12.1□□□□□ -0.47
HCFC1R1-204ENST00000573095 TNXBP22105 4242 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 VCYO14598 125 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 PPP1R17O96001 155 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 SYCNQ0VAF6 134 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 RIGQ13278 110 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 NRACQ8N912 160 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
HCFC1R1-204ENST00000573095 SMKR1H3BMG3 65 aa12.07□□□□□ -0.48
HCFC1R1-204ENST00000573095 FCER1GP30273 86 aa12.07□□□□□ -0.48
HCFC1R1-204ENST00000573095 SUMO2P61956 95 aaKnown RBP12.07□□□□□ -0.48
HCFC1R1-204ENST00000573095 ISOC2Q96AB3 205 aa12.07□□□□□ -0.48
HCFC1R1-204ENST00000573095 C1orf196B1AJZ1 125 aa12.06□□□□□ -0.48
HCFC1R1-204ENST00000573095 CAMPP49913 170 aa12.06□□□□□ -0.48
HCFC1R1-204ENST00000573095 SMAGPQ0VAQ4 97 aa12.06□□□□□ -0.48
HCFC1R1-204ENST00000573095 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
HCFC1R1-204ENST00000573095 UBE2D4Q9Y2X8 147 aa12.06□□□□□ -0.48
HCFC1R1-204ENST00000573095 IFITM2Q01629 132 aa12.05□□□□□ -0.48
HCFC1R1-204ENST00000573095 KIR2DL4Q99706 377 aa12.05□□□□□ -0.48
HCFC1R1-204ENST00000573095 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
HCFC1R1-204ENST00000573095 COX7A2LO14548 114 aa12.04□□□□□ -0.48
HCFC1R1-204ENST00000573095 PPP1R2P9O14990 202 aa12.04□□□□□ -0.48
HCFC1R1-204ENST00000573095 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
HCFC1R1-204ENST00000573095 MALP21145 153 aa12.03□□□□□ -0.48
HCFC1R1-204ENST00000573095 PTTG1IPP53801 180 aa12.03□□□□□ -0.48
HCFC1R1-204ENST00000573095 RPL23P62829 140 aaKnown RBP12.03□□□□□ -0.48
HCFC1R1-204ENST00000573095 FAM74A3Q4VXF1 159 aa12.03□□□□□ -0.48
HCFC1R1-204ENST00000573095 LOC107984640A0A0U1RRK4 108 aa12.02□□□□□ -0.49
HCFC1R1-204ENST00000573095 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.49
HCFC1R1-204ENST00000573095 MRPL51Q4U2R6 128 aaKnown RBP12.02□□□□□ -0.49
HCFC1R1-204ENST00000573095 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.49
HCFC1R1-204ENST00000573095 SPINK6Q6UWN8 80 aa12.02□□□□□ -0.49
HCFC1R1-204ENST00000573095 TIMM21Q9BVV7 248 aa12.02□□□□□ -0.49
HCFC1R1-204ENST00000573095 RNASE13Q5GAN3 156 aaKnown RBP12.01□□□□□ -0.49
HCFC1R1-204ENST00000573095 Q6ZRP5 223 aa12.01□□□□□ -0.49
HCFC1R1-204ENST00000573095 Q6ZUT4 128 aa12.01□□□□□ -0.49
HCFC1R1-204ENST00000573095 TRAV13-1A0A0B4J241 112 aa12□□□□□ -0.49
HCFC1R1-204ENST00000573095 ADIRFQ15847 76 aa12□□□□□ -0.49
HCFC1R1-204ENST00000573095 TMEM18Q96B42 140 aa12□□□□□ -0.49
HCFC1R1-204ENST00000573095 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 SMIM27A0A1W2PRY6 76 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 LINC00862A6NCI5 91 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 RPL32P62910 135 aaKnown RBP11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 REG3GQ6UW15 175 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 C20orf78Q9BR46 151 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 NAT8Q9UHE5 227 aa11.99□□□□□ -0.49
HCFC1R1-204ENST00000573095 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
HCFC1R1-204ENST00000573095 A0A1B0GW15 77 aa11.98□□□□□ -0.49
HCFC1R1-204ENST00000573095 APOMO95445 188 aa11.98□□□□□ -0.49
HCFC1R1-204ENST00000573095 GAGE2BQ13066 116 aa11.98□□□□□ -0.49
HCFC1R1-204ENST00000573095 TCAPO15273 167 aa11.97□□□□□ -0.49
HCFC1R1-204ENST00000573095 SRSF9Q13242 221 aaKnown RBP eCLIP11.97□□□□□ -0.49
HCFC1R1-204ENST00000573095 C9JQL5 133 aa11.96□□□□□ -0.49
HCFC1R1-204ENST00000573095 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.96□□□□□ -0.49
HCFC1R1-204ENST00000573095 C5orf38Q86SI9 138 aa11.96□□□□□ -0.49
HCFC1R1-204ENST00000573095 CKS2P33552 79 aa11.95□□□□□ -0.5
HCFC1R1-204ENST00000573095 SPAG11BQ08648 103 aa11.95□□□□□ -0.5
HCFC1R1-204ENST00000573095 OR10D4PQ8NGN7 298 aa11.95□□□□□ -0.5
HCFC1R1-204ENST00000573095 SMIM2Q9BVW6 85 aa11.95□□□□□ -0.5
HCFC1R1-204ENST00000573095 A0A1W2PNN7 141 aa11.94□□□□□ -0.5
HCFC1R1-204ENST00000573095 TNFRSF6BO95407 300 aa11.94□□□□□ -0.5
HCFC1R1-204ENST00000573095 KRTAP10-8P60410 259 aa11.94□□□□□ -0.5
HCFC1R1-204ENST00000573095 RPL39P62891 51 aaKnown RBP11.94□□□□□ -0.5
HCFC1R1-204ENST00000573095 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
HCFC1R1-204ENST00000573095 RPL18AQ02543 176 aaKnown RBP11.93□□□□□ -0.5
HCFC1R1-204ENST00000573095 RNF151Q2KHN1 245 aa11.93□□□□□ -0.5
HCFC1R1-204ENST00000573095 FAM104AQ969W3 186 aa11.93□□□□□ -0.5
HCFC1R1-204ENST00000573095 D6R8Y8 96 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms