RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 RIGQ13278 110 aa8.76□□□□□ -1.01
RAB40B-204ENST00000571554 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
RAB40B-204ENST00000571554 OR5A1Q8NGJ0 315 aa8.76□□□□□ -1.01
RAB40B-204ENST00000571554 LINC00526Q96FQ7 95 aa8.76□□□□□ -1.01
RAB40B-204ENST00000571554 A0A087WYN8 130 aa8.75□□□□□ -1.01
RAB40B-204ENST00000571554 LINC00959A0A1B0GUT2 108 aa8.75□□□□□ -1.01
RAB40B-204ENST00000571554 CCL25O15444 150 aa8.75□□□□□ -1.01
RAB40B-204ENST00000571554 COX6A2Q02221 97 aa8.75□□□□□ -1.01
RAB40B-204ENST00000571554 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
RAB40B-204ENST00000571554 NAT8BQ9UHF3 227 aa8.75□□□□□ -1.01
RAB40B-204ENST00000571554 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 C7orf77A4D0Y5 90 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 FCER1GP30273 86 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 CAMPP49913 170 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
RAB40B-204ENST00000571554 MRPL51Q4U2R6 128 aaKnown RBP8.74□□□□□ -1.01
RAB40B-204ENST00000571554 FAM74A3Q4VXF1 159 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 RNASE13Q5GAN3 156 aaKnown RBP8.74□□□□□ -1.01
RAB40B-204ENST00000571554 NRACQ8N912 160 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 SPACA4Q8TDM5 124 aa8.74□□□□□ -1.01
RAB40B-204ENST00000571554 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
RAB40B-204ENST00000571554 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
RAB40B-204ENST00000571554 CDC42SE2Q9NRR3 84 aa8.73□□□□□ -1.01
RAB40B-204ENST00000571554 VCYO14598 125 aa8.72□□□□□ -1.01
RAB40B-204ENST00000571554 SUMO2P61956 95 aaKnown RBP8.72□□□□□ -1.01
RAB40B-204ENST00000571554 PEA15Q15121 130 aa8.72□□□□□ -1.01
RAB40B-204ENST00000571554 MAJINQ3KP22 176 aa8.72□□□□□ -1.01
RAB40B-204ENST00000571554 ZNF664Q8N3J9 261 aa8.72□□□□□ -1.01
RAB40B-204ENST00000571554 SMIM27A0A1W2PRY6 76 aa8.71□□□□□ -1.02
RAB40B-204ENST00000571554 SS18Q15532 418 aa8.71□□□□□ -1.02
RAB40B-204ENST00000571554 FAM104BQ5XKR9 115 aa8.71□□□□□ -1.02
RAB40B-204ENST00000571554 MRPL54Q6P161 138 aaKnown RBP8.71□□□□□ -1.02
RAB40B-204ENST00000571554 MRPL52Q86TS9 123 aaKnown RBP8.71□□□□□ -1.02
RAB40B-204ENST00000571554 A0A096LNI7 61 aa8.7□□□□□ -1.02
RAB40B-204ENST00000571554 OXTP01178 125 aa8.7□□□□□ -1.02
RAB40B-204ENST00000571554 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
RAB40B-204ENST00000571554 PHOX2AO14813 284 aa8.69□□□□□ -1.02
RAB40B-204ENST00000571554 Q6ZUT4 128 aa8.69□□□□□ -1.02
RAB40B-204ENST00000571554 KIR2DL4Q99706 377 aa8.69□□□□□ -1.02
RAB40B-204ENST00000571554 UBE2D4Q9Y2X8 147 aa8.69□□□□□ -1.02
RAB40B-204ENST00000571554 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
RAB40B-204ENST00000571554 PPP1R17O96001 155 aa8.68□□□□□ -1.02
RAB40B-204ENST00000571554 CKS2P33552 79 aa8.68□□□□□ -1.02
RAB40B-204ENST00000571554 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
RAB40B-204ENST00000571554 STPG4Q8N801 248 aa8.68□□□□□ -1.02
RAB40B-204ENST00000571554 CARD19Q96LW7 228 aa8.68□□□□□ -1.02
RAB40B-204ENST00000571554 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
RAB40B-204ENST00000571554 PPP1R2P9O14990 202 aa8.67□□□□□ -1.02
RAB40B-204ENST00000571554 RPL39P62891 51 aaKnown RBP8.67□□□□□ -1.02
RAB40B-204ENST00000571554 D6R8Y8 96 aa8.66□□□□□ -1.02
RAB40B-204ENST00000571554 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
RAB40B-204ENST00000571554 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
RAB40B-204ENST00000571554 NPYP01303 97 aa8.66□□□□□ -1.02
RAB40B-204ENST00000571554 HBBP68871 147 aa8.66□□□□□ -1.02
RAB40B-204ENST00000571554 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
RAB40B-204ENST00000571554 IGLV4-69A0A075B6H9 119 aa8.65□□□□□ -1.02
RAB40B-204ENST00000571554 A0A1B0GW15 77 aa8.65□□□□□ -1.02
RAB40B-204ENST00000571554 A0A1B0GXF2 115 aa8.65□□□□□ -1.02
RAB40B-204ENST00000571554 MALP21145 153 aa8.65□□□□□ -1.02
RAB40B-204ENST00000571554 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
RAB40B-204ENST00000571554 C5orf38Q86SI9 138 aa8.65□□□□□ -1.02
RAB40B-204ENST00000571554 OPRPNQ99935 248 aaPredicted RBP8.65□□□□□ -1.02
RAB40B-204ENST00000571554 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
RAB40B-204ENST00000571554 LINC00862A6NCI5 91 aa8.64□□□□□ -1.03
RAB40B-204ENST00000571554 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
RAB40B-204ENST00000571554 COX7A2LO14548 114 aa8.64□□□□□ -1.03
RAB40B-204ENST00000571554 TCAPO15273 167 aa8.64□□□□□ -1.03
RAB40B-204ENST00000571554 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
RAB40B-204ENST00000571554 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
RAB40B-204ENST00000571554 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
RAB40B-204ENST00000571554 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
RAB40B-204ENST00000571554 TRBV24-1A0A075B6N3 115 aa8.63□□□□□ -1.03
RAB40B-204ENST00000571554 F8W036 122 aa8.63□□□□□ -1.03
RAB40B-204ENST00000571554 SMAGPQ0VAQ4 97 aa8.63□□□□□ -1.03
RAB40B-204ENST00000571554 Q6ZRU5 148 aa8.63□□□□□ -1.03
RAB40B-204ENST00000571554 TMEM18Q96B42 140 aa8.63□□□□□ -1.03
RAB40B-204ENST00000571554 S100A8P05109 93 aa8.62□□□□□ -1.03
RAB40B-204ENST00000571554 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
RAB40B-204ENST00000571554 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
RAB40B-204ENST00000571554 MT1HL1P0DM35 61 aa8.61□□□□□ -1.03
RAB40B-204ENST00000571554 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
RAB40B-204ENST00000571554 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
RAB40B-204ENST00000571554 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
RAB40B-204ENST00000571554 FAM104AQ969W3 186 aa8.61□□□□□ -1.03
RAB40B-204ENST00000571554 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
RAB40B-204ENST00000571554 A0A0J9YXV3 536 aa8.6□□□□□ -1.03
RAB40B-204ENST00000571554 SPAG11BQ08648 103 aa8.6□□□□□ -1.03
RAB40B-204ENST00000571554 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
RAB40B-204ENST00000571554 TMEM136Q6ZRR5 245 aa8.59□□□□□ -1.03
RAB40B-204ENST00000571554 ORMDL3Q8N138 153 aa8.59□□□□□ -1.03
RAB40B-204ENST00000571554 PRELID3AQ96N28 172 aa8.59□□□□□ -1.03
RAB40B-204ENST00000571554 LINC00474Q9P2X8 69 aa8.59□□□□□ -1.03
RAB40B-204ENST00000571554 LOC107984640A0A0U1RRK4 108 aa8.58□□□□□ -1.04
RAB40B-204ENST00000571554 LOC389332A0A1B0GUA5 103 aa8.58□□□□□ -1.04
RAB40B-204ENST00000571554 IFITM10A6NMD0 228 aa8.58□□□□□ -1.04
RAB40B-204ENST00000571554 PPBPP02775 128 aa8.58□□□□□ -1.04
RAB40B-204ENST00000571554 RPL18AQ02543 176 aaKnown RBP8.58□□□□□ -1.04
RAB40B-204ENST00000571554 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
RAB40B-204ENST00000571554 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms