RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 MAP6D1Q9H9H5 199 aa12.6□□□□□ -0.39
SCARF1-205ENST00000571272 TEX15Q9BXT5 2789 aa12.6□□□□□ -0.39
SCARF1-205ENST00000571272 IGSF10Q6WRI0 2623 aa12.6□□□□□ -0.39
SCARF1-205ENST00000571272 NDUFV3P56181 108 aaKnown RBP12.59□□□□□ -0.39
SCARF1-205ENST00000571272 TTC32Q5I0X7 151 aa12.59□□□□□ -0.39
SCARF1-205ENST00000571272 Q9H8V8 135 aa12.59□□□□□ -0.39
SCARF1-205ENST00000571272 CHD6Q8TD26 2715 aa12.59□□□□□ -0.39
SCARF1-205ENST00000571272 A8MTW9 85 aa12.59□□□□□ -0.39
SCARF1-205ENST00000571272 XCL2Q9UBD3 114 aa12.59□□□□□ -0.39
SCARF1-205ENST00000571272 H3BT86 120 aa12.59□□□□□ -0.39
SCARF1-205ENST00000571272 CITED2Q99967 270 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-205ENST00000571272 PIEZO1Q92508 2521 aa12.59□□□□□ -0.39
SCARF1-205ENST00000571272 ABCA12Q86UK0 2595 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 B5MCH6 92 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 NDUFA1O15239 70 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 Q6YL49 198 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 SS18L2Q9UHA2 77 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 LRRK2Q5S007 2527 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 DSCR9P59020 149 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 DYNLRB2Q8TF09 96 aa12.58□□□□□ -0.4
SCARF1-205ENST00000571272 FBN2P35556 2912 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 IFITM1P13164 125 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 TIMM17BO60830 172 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 TIRAPP58753 221 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 GAGE5Q13069 117 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 GAGE6Q13070 117 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 CIRBPQ14011 172 aaKnown RBP12.57□□□□□ -0.4
SCARF1-205ENST00000571272 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
SCARF1-205ENST00000571272 EPG5Q9HCE0 2579 aa12.56□□□□□ -0.4
SCARF1-205ENST00000571272 A0A096LNT2 108 aa12.56□□□□□ -0.4
SCARF1-205ENST00000571272 TRAV13-1A0A0B4J241 112 aa12.56□□□□□ -0.4
SCARF1-205ENST00000571272 LINC00308Q8TCZ7 52 aa12.56□□□□□ -0.4
SCARF1-205ENST00000571272 SONP18583 2426 aaKnown RBP12.56□□□□□ -0.4
SCARF1-205ENST00000571272 SETD2Q9BYW2 2564 aaPredicted RBP12.56□□□□□ -0.4
SCARF1-205ENST00000571272 INSP01308 110 aa12.56□□□□□ -0.4
SCARF1-205ENST00000571272 LINC00242Q5T6M2 205 aa12.56□□□□□ -0.4
SCARF1-205ENST00000571272 IGLV5-45A0A087WSX0 123 aa12.55□□□□□ -0.4
SCARF1-205ENST00000571272 RS1O15537 224 aa12.55□□□□□ -0.4
SCARF1-205ENST00000571272 BEAN1Q3B7T3 259 aa12.55□□□□□ -0.4
SCARF1-205ENST00000571272 NAV2Q8IVL1 2488 aa12.55□□□□□ -0.4
SCARF1-205ENST00000571272 PEMTQ9UBM1 199 aa12.55□□□□□ -0.4
SCARF1-205ENST00000571272 TRGV1A0A0A0MS02 117 aa12.55□□□□□ -0.4
SCARF1-205ENST00000571272 J3QLI3 93 aa12.55□□□□□ -0.4
SCARF1-205ENST00000571272 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
SCARF1-205ENST00000571272 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
SCARF1-205ENST00000571272 CCDC179H3BU77 68 aa12.53□□□□□ -0.4
SCARF1-205ENST00000571272 HERVK_113P63121 156 aa12.53□□□□□ -0.4
SCARF1-205ENST00000571272 SOSTDC1Q6X4U4 206 aa12.53□□□□□ -0.4
SCARF1-205ENST00000571272 Q8N2B8 174 aa12.53□□□□□ -0.4
SCARF1-205ENST00000571272 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.4
SCARF1-205ENST00000571272 IGLV5-39A0A0G2JS06 123 aa12.52□□□□□ -0.41
SCARF1-205ENST00000571272 MEIG1Q5JSS6 88 aa12.52□□□□□ -0.41
SCARF1-205ENST00000571272 SMIM1B2RUZ4 78 aa12.51□□□□□ -0.41
SCARF1-205ENST00000571272 PRIMA1Q86XR5 153 aa12.51□□□□□ -0.41
SCARF1-205ENST00000571272 Q6Q795 121 aa12.51□□□□□ -0.41
SCARF1-205ENST00000571272 NTM-AS1Q6ZSK4 140 aa12.5□□□□□ -0.41
SCARF1-205ENST00000571272 GAGE12JA6NER3 117 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 GAGE7O76087 117 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 GAGE12FP0CL80 117 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 GAGE12GP0CL81 117 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 GAGE12IP0CL82 117 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 GAGE4Q13068 117 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 C1orf158Q8N1D5 194 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 FSHBP01225 129 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 ODF3L2Q3SX64 289 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 Q6ZTI0 123 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 NF1P21359 2839 aa12.49□□□□□ -0.41
SCARF1-205ENST00000571272 IGHV4-31P0DP07 118 aa12.48□□□□□ -0.41
SCARF1-205ENST00000571272 C4orf3Q8WVX3 66 aa12.48□□□□□ -0.41
SCARF1-205ENST00000571272 STHQ8IWL8 128 aa12.48□□□□□ -0.41
SCARF1-205ENST00000571272 COX7A2LO14548 114 aa12.48□□□□□ -0.41
SCARF1-205ENST00000571272 RPL36AP83881 106 aaKnown RBP12.48□□□□□ -0.41
SCARF1-205ENST00000571272 DEFB121Q5J5C9 76 aa12.48□□□□□ -0.41
SCARF1-205ENST00000571272 RPL36ALQ969Q0 106 aaKnown RBP12.48□□□□□ -0.41
SCARF1-205ENST00000571272 AKAP9Q99996 3911 aa12.46□□□□□ -0.41
SCARF1-205ENST00000571272 NIPBLQ6KC79 2804 aaeCLIP12.46□□□□□ -0.42
SCARF1-205ENST00000571272 ZNF462Q96JM2 2506 aa12.46□□□□□ -0.42
SCARF1-205ENST00000571272 FAM240AA0A1B0GVK7 77 aa12.46□□□□□ -0.42
SCARF1-205ENST00000571272 A0A1W2PRX2 142 aa12.45□□□□□ -0.42
SCARF1-205ENST00000571272 K7EQD1 137 aa12.45□□□□□ -0.42
SCARF1-205ENST00000571272 SHISA2Q6UWI4 295 aa12.45□□□□□ -0.42
SCARF1-205ENST00000571272 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
SCARF1-205ENST00000571272 CR1P17927 2039 aa12.45□□□□□ -0.42
SCARF1-205ENST00000571272 Q96MF0 132 aa12.44□□□□□ -0.42
SCARF1-205ENST00000571272 ZNF469Q96JG9 3925 aaPredicted RBP12.44□□□□□ -0.42
SCARF1-205ENST00000571272 F5H768 121 aa12.44□□□□□ -0.42
SCARF1-205ENST00000571272 CHCHD5Q9BSY4 110 aa12.43□□□□□ -0.42
SCARF1-205ENST00000571272 CCDC168Q8NDH2 2452 aa12.43□□□□□ -0.42
SCARF1-205ENST00000571272 MRPL23Q16540 153 aaKnown RBP12.43□□□□□ -0.42
SCARF1-205ENST00000571272 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
SCARF1-205ENST00000571272 IGKV3OR2-268A0A0C4DH90 116 aa12.42□□□□□ -0.42
SCARF1-205ENST00000571272 DAZ2Q13117 558 aaKnown RBP12.42□□□□□ -0.42
SCARF1-205ENST00000571272 DAZ4Q86SG3 579 aaKnown RBP12.42□□□□□ -0.42
SCARF1-205ENST00000571272 FAM218AQ96MZ4 157 aa12.42□□□□□ -0.42
SCARF1-205ENST00000571272 DAZ3Q9NR90 486 aaKnown RBP12.42□□□□□ -0.42
SCARF1-205ENST00000571272 KRTAP10-9P60411 292 aa12.42□□□□□ -0.42
SCARF1-205ENST00000571272 CSDC2Q9Y534 153 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms