RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	FAM223B	A6NKX1	122 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243		M0R3E3	92 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	INE1	O15225	51 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	IGKV2D-40	P01614	121 aa	Predicted RBP	0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	SPINT3	P49223	89 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	EFNA4	P52798	201 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	DEFA5	Q01523	94 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	SPATA45	Q537H7	98 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243		Q5BKY6	102 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	NMS	Q5H8A3	153 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	VMO1	Q7Z5L0	202 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	NDUFA11	Q86Y39	141 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	CCL19	Q99731	98 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	ST20	Q9HBF5	79 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	DYNLRB1	Q9NP97	96 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	CDC42SE2	Q9NRR3	84 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	ARL2-SNX15	V9GYD0	113 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	DOCK2	Q92608	1830 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	ASCC3	Q8N3C0	2202 aa	Known RBP	0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	DLEC1	Q9Y238	1755 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	FBN2	P35556	2912 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	RRBP1	Q9P2E9	1410 aa	Known RBP	0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	LRRIQ1	Q96JM4	1722 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	TCHH	Q07283	1943 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	LOC110117498	A0A087WWA1	95 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	IGLV3-32	A0A0A0MS00	114 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	TRGV1	A0A0A0MS02	117 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	CTXND1	A0A1B0GTU2	59 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	ZNF815P	A8K554	130 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	TMEM14DP	A8MWL7	114 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243		F8WEM9	126 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243		H3BUT2	72 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	NDUFC1	O43677	76 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	COX6C	P09669	75 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	CCL18	P55774	89 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	KRTAP10-4	P60372	401 aa	Predicted RBP	0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	ADIRF	Q15847	76 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	BVES-AS1	Q5T3Y7	98 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	C6orf52	Q5T4I8	152 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	FAM74A4	Q5TZK3	123 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	GDF5OS	Q5U4N7	250 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	XAF1	Q6GPH4	301 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	PPP1R1C	Q8WVI7	109 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243		Q96NJ1	140 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	PRR15L	Q9BU68	103 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	PROK2	Q9HC23	129 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	PSENEN	Q9NZ42	101 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	LENEP	Q9Y5L5	61 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	SNURF	Q9Y675	71 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243		V9GYV3	84 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	PLIN4	Q96Q06	1357 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	POLA1	P09884	1462 aa	Predicted RBP	0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	NLRP1	Q9C000	1473 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	ARHGEF5	Q12774	1597 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	ZNF142	P52746	1687 aa	Predicted RBP	0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	COL4A6	Q14031	1691 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	RGPD4	Q7Z3J3	1758 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	F5	P12259	2224 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	TNRC6B	Q9UPQ9	1833 aa	Known RBP	0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	HMGXB3	Q12766	1538 aa		0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	BLM	P54132	1417 aa	Predicted RBP	0.64	□□□□□ -2.31
UBR1-209	ENST00000569243	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.63	□□□□□ -2.31
UBR1-209	ENST00000569243		E9PCH4	1651 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	SCN7A	Q01118	1682 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	ATP10B	O94823	1461 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	PXDN	Q92626	1479 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	CACNA1B	Q00975	2339 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	DNAJC13	O75165	2243 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	TRBV25-1	A0A075B6N4	114 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243		A0A087WVE0	104 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	TRAV1-2	A0A0B4J238	106 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243		F8VRH5	84 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243		M0R135	149 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243		M0R2N4	97 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	PDCD5	O14737	125 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	IGLC2	P0DOY2	106 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	IGLC3	P0DOY3	106 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	ZNF137P	P52743	207 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	PSMG4	Q5JS54	123 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	TMEM170B	Q5T4T1	132 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	CFAP126	Q5VTH2	177 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	MYO7B	Q6PIF6	2116 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243		Q6ZQY7	126 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	DEFB132	Q7Z7B7	95 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	ZNF563	Q8TA94	476 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	TMEM14B	Q9NUH8	114 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	MED9	Q9NWA0	146 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	ZNF236	Q9UL36	1845 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	ZDBF2	Q9HCK1	2354 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	KIF14	Q15058	1648 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	TECTA	O75443	2155 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	NEXMIF	Q5QGS0	1516 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	EHBP1L1	Q8N3D4	1523 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	NCOA6	Q14686	2063 aa	Predicted RBP	0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	PLXNA1	Q9UIW2	1896 aa		0.63	□□□□□ -2.31
UBR1-209	ENST00000569243	UNC13B	O14795	1591 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	ADAMTS12	P58397	1594 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	AFDN	P55196	1824 aa	Known RBP	0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	UBR1	Q8IWV7	1749 aa		0.62	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms