RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	KRTAP26-1	Q6PEX3	210 aa		6.74	□□□□□ -1.33
UBR1-207	ENST00000568782	SCX	Q7RTU7	201 aa		6.74	□□□□□ -1.33
UBR1-207	ENST00000568782	LINC00528	Q8N1L1	170 aa		6.74	□□□□□ -1.33
UBR1-207	ENST00000568782	ANAPC16	Q96DE5	110 aa		6.74	□□□□□ -1.33
UBR1-207	ENST00000568782	C20orf78	Q9BR46	151 aa		6.74	□□□□□ -1.33
UBR1-207	ENST00000568782	PKIG	Q9Y2B9	76 aa		6.74	□□□□□ -1.33
UBR1-207	ENST00000568782	CCL25	O15444	150 aa		6.73	□□□□□ -1.33
UBR1-207	ENST00000568782	ESD	P10768	282 aa		6.73	□□□□□ -1.33
UBR1-207	ENST00000568782	CNBP	P62633	177 aa	Known RBP	6.73	□□□□□ -1.33
UBR1-207	ENST00000568782	ATP5L2	Q7Z4Y8	100 aa		6.73	□□□□□ -1.33
UBR1-207	ENST00000568782	MRPL52	Q86TS9	123 aa	Known RBP	6.73	□□□□□ -1.33
UBR1-207	ENST00000568782	ZNF664	Q8N3J9	261 aa		6.73	□□□□□ -1.33
UBR1-207	ENST00000568782	LINC00959	A0A1B0GUT2	108 aa		6.72	□□□□□ -1.33
UBR1-207	ENST00000568782	C1orf196	B1AJZ1	125 aa		6.72	□□□□□ -1.33
UBR1-207	ENST00000568782	GAS8-AS1	O95177	125 aa		6.72	□□□□□ -1.33
UBR1-207	ENST00000568782	RAB5A	P20339	215 aa		6.72	□□□□□ -1.33
UBR1-207	ENST00000568782	MAL	P21145	153 aa		6.72	□□□□□ -1.33
UBR1-207	ENST00000568782	XCL1	P47992	114 aa		6.72	□□□□□ -1.33
UBR1-207	ENST00000568782	CIRBP-AS1	Q8TBR5	109 aa		6.72	□□□□□ -1.33
UBR1-207	ENST00000568782	TRBV24-1	A0A075B6N3	115 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782		D6R8Y8	96 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	ZNF561-AS1	K7EIQ3	104 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	PHOX2A	O14813	284 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	TNFRSF6B	O95407	300 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	ORMDL3	Q8N138	153 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	NRAC	Q8N912	160 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	CDC42SE2	Q9NRR3	84 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	CSDC2	Q9Y534	153 aa	Known RBP	6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	DNAH5	Q8TE73	4624 aa		6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	APOB	P04114	4563 aa	Known RBP	6.71	□□□□□ -1.34
UBR1-207	ENST00000568782	IGHV1-58	A0A0C4DH39	117 aa		6.7	□□□□□ -1.34
UBR1-207	ENST00000568782	RPL32	P62910	135 aa	Known RBP	6.7	□□□□□ -1.34
UBR1-207	ENST00000568782	HIGD2B	Q4VC39	106 aa		6.7	□□□□□ -1.34
UBR1-207	ENST00000568782	CD164L2	Q6UWJ8	174 aa		6.7	□□□□□ -1.34
UBR1-207	ENST00000568782	APOM	O95445	188 aa		6.69	□□□□□ -1.34
UBR1-207	ENST00000568782	CLLU1	Q5K131	121 aa		6.69	□□□□□ -1.34
UBR1-207	ENST00000568782	SDIM1	Q6ZPB5	146 aa		6.69	□□□□□ -1.34
UBR1-207	ENST00000568782	TMEM136	Q6ZRR5	245 aa		6.69	□□□□□ -1.34
UBR1-207	ENST00000568782	SMIM2	Q9BVW6	85 aa		6.69	□□□□□ -1.34
UBR1-207	ENST00000568782	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.68	□□□□□ -1.34
UBR1-207	ENST00000568782		A0A1B0GXF2	115 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782		J3QL48	77 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	COX7A2L	O14548	114 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	FOXI1	Q12951	378 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	UQCC3	Q6UW78	93 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	C15orf56	Q8N910	161 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	PRELID3A	Q96N28	172 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	TIMM21	Q9BVV7	248 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	LAMTOR2	Q9Y2Q5	125 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	UBE2D4	Q9Y2X8	147 aa		6.68	□□□□□ -1.34
UBR1-207	ENST00000568782	TRAV13-1	A0A0B4J241	112 aa		6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	NPY	P01303	97 aa		6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	IFI27	P40305	119 aa	Predicted RBP	6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	RPL37A	P61513	92 aa	Known RBP	6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	CTDSP1	Q9GZU7	261 aa		6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	MAP1LC3A	Q9H492	121 aa		6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	SPANXA1	Q9NS26	97 aa		6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	LINC00474	Q9P2X8	69 aa		6.67	□□□□□ -1.34
UBR1-207	ENST00000568782	G0S2	P27469	103 aa		6.66	□□□□□ -1.34
UBR1-207	ENST00000568782	COX6A2	Q02221	97 aa		6.66	□□□□□ -1.34
UBR1-207	ENST00000568782	C7orf33	Q8WU49	177 aa		6.66	□□□□□ -1.34
UBR1-207	ENST00000568782	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.66	□□□□□ -1.34
UBR1-207	ENST00000568782	S100P	P25815	95 aa		6.65	□□□□□ -1.34
UBR1-207	ENST00000568782	SYCN	Q0VAF6	134 aa		6.65	□□□□□ -1.34
UBR1-207	ENST00000568782	MAJIN	Q3KP22	176 aa		6.65	□□□□□ -1.34
UBR1-207	ENST00000568782	RNASE13	Q5GAN3	156 aa	Known RBP	6.65	□□□□□ -1.34
UBR1-207	ENST00000568782	CARD19	Q96LW7	228 aa		6.65	□□□□□ -1.34
UBR1-207	ENST00000568782	IMMP2L	Q96T52	175 aa		6.65	□□□□□ -1.34
UBR1-207	ENST00000568782	IGKV2-24	A0A0C4DH68	120 aa		6.64	□□□□□ -1.35
UBR1-207	ENST00000568782	LOC389332	A0A1B0GUA5	103 aa		6.64	□□□□□ -1.35
UBR1-207	ENST00000568782	SLPI	P03973	132 aa		6.64	□□□□□ -1.35
UBR1-207	ENST00000568782	RPL39	P62891	51 aa	Known RBP	6.64	□□□□□ -1.35
UBR1-207	ENST00000568782		Q6ZN92	141 aa		6.64	□□□□□ -1.35
UBR1-207	ENST00000568782		A0A087WYN8	130 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	TGIF2-C20orf24	A0A0A6YYL0	155 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	TMEM218	A2RU14	115 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	IFITM10	A6NMD0	228 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782		K7EMI3	77 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	MRPS36	P82909	103 aa	Known RBP	6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	CIRBP	Q14011	172 aa	Known RBP	6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	ORMDL2	Q53FV1	153 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782		Q6ZUT4	128 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	C5orf38	Q86SI9	138 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	SPACA4	Q8TDM5	124 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	CAMK2N2	Q96S95	79 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	C2orf88	Q9BSF0	95 aa		6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	SRRM2	Q9UQ35	2752 aa	Known RBP	6.63	□□□□□ -1.35
UBR1-207	ENST00000568782	IGLV4-69	A0A075B6H9	119 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	TRAV9-1	A0A075B6T8	112 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	PRSS47	A8MTI9	375 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	CHTF8	P0CG12	524 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	TEX43	Q6ZNM6	134 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	STPG4	Q8N801	248 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	PRSS3P2	Q8NHM4	247 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	SEC11C	Q9BY50	192 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	NXT2	Q9NPJ8	142 aa	Known RBP	6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	CYSLTR1	Q9Y271	337 aa		6.62	□□□□□ -1.35
UBR1-207	ENST00000568782	ABCA13	Q86UQ4	5058 aa		6.61	□□□□□ -1.35
UBR1-207	ENST00000568782	LOC107984640	A0A0U1RRK4	108 aa		6.61	□□□□□ -1.35
UBR1-207	ENST00000568782		F8WDY8	70 aa		6.61	□□□□□ -1.35

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