RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
FANCA-220ENST00000566409 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
FANCA-220ENST00000566409 LINC00959A0A1B0GUT2 108 aa9.33□□□□□ -0.92
FANCA-220ENST00000566409 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
FANCA-220ENST00000566409 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
FANCA-220ENST00000566409 FAM104BQ5XKR9 115 aa9.33□□□□□ -0.92
FANCA-220ENST00000566409 MRPL52Q86TS9 123 aaKnown RBP9.33□□□□□ -0.92
FANCA-220ENST00000566409 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
FANCA-220ENST00000566409 CDC42SE2Q9NRR3 84 aa9.33□□□□□ -0.92
FANCA-220ENST00000566409 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
FANCA-220ENST00000566409 J3QL48 77 aa9.32□□□□□ -0.92
FANCA-220ENST00000566409 VCYO14598 125 aa9.32□□□□□ -0.92
FANCA-220ENST00000566409 CAMPP49913 170 aa9.32□□□□□ -0.92
FANCA-220ENST00000566409 SUMO2P61956 95 aaKnown RBP9.32□□□□□ -0.92
FANCA-220ENST00000566409 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
FANCA-220ENST00000566409 TMEM101Q96IK0 257 aa9.32□□□□□ -0.92
FANCA-220ENST00000566409 BTF3L4Q96K17 158 aa9.32□□□□□ -0.92
FANCA-220ENST00000566409 GVQW2A0A096LPI5 108 aaPredicted RBP9.31□□□□□ -0.92
FANCA-220ENST00000566409 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
FANCA-220ENST00000566409 CCL25O15444 150 aa9.31□□□□□ -0.92
FANCA-220ENST00000566409 XCL1P47992 114 aa9.31□□□□□ -0.92
FANCA-220ENST00000566409 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
FANCA-220ENST00000566409 A0A087WYN8 130 aa9.3□□□□□ -0.92
FANCA-220ENST00000566409 COX6A2Q02221 97 aa9.3□□□□□ -0.92
FANCA-220ENST00000566409 ZNF664Q8N3J9 261 aa9.3□□□□□ -0.92
FANCA-220ENST00000566409 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
FANCA-220ENST00000566409 TRBV24-1A0A075B6N3 115 aa9.29□□□□□ -0.92
FANCA-220ENST00000566409 A0A1B0GXF2 115 aa9.29□□□□□ -0.92
FANCA-220ENST00000566409 PPP1R17O96001 155 aa9.29□□□□□ -0.92
FANCA-220ENST00000566409 PRSS3P2Q8NHM4 247 aa9.29□□□□□ -0.92
FANCA-220ENST00000566409 LINC00526Q96FQ7 95 aa9.29□□□□□ -0.92
FANCA-220ENST00000566409 A0A1B0GW15 77 aa9.28□□□□□ -0.92
FANCA-220ENST00000566409 FCER1GP30273 86 aa9.28□□□□□ -0.92
FANCA-220ENST00000566409 MRPL54Q6P161 138 aaKnown RBP9.28□□□□□ -0.92
FANCA-220ENST00000566409 UBE2D4Q9Y2X8 147 aa9.28□□□□□ -0.92
FANCA-220ENST00000566409 LINC00862A6NCI5 91 aa9.27□□□□□ -0.93
FANCA-220ENST00000566409 RNASE13Q5GAN3 156 aaKnown RBP9.27□□□□□ -0.93
FANCA-220ENST00000566409 CD164L2Q6UWJ8 174 aa9.27□□□□□ -0.93
FANCA-220ENST00000566409 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
FANCA-220ENST00000566409 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
FANCA-220ENST00000566409 PPP1R2P9O14990 202 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 CKS2P33552 79 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
FANCA-220ENST00000566409 SS18Q15532 418 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 FAM104AQ969W3 186 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 DPH3Q96FX2 82 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
FANCA-220ENST00000566409 IGHV1-58A0A0C4DH39 117 aa9.25□□□□□ -0.93
FANCA-220ENST00000566409 D6R8Y8 96 aa9.25□□□□□ -0.93
FANCA-220ENST00000566409 HBBP68871 147 aa9.25□□□□□ -0.93
FANCA-220ENST00000566409 A0A096LNI7 61 aa9.24□□□□□ -0.93
FANCA-220ENST00000566409 OXTP01178 125 aa9.24□□□□□ -0.93
FANCA-220ENST00000566409 NPYP01303 97 aa9.24□□□□□ -0.93
FANCA-220ENST00000566409 RPL39P62891 51 aaKnown RBP9.24□□□□□ -0.93
FANCA-220ENST00000566409 Q6ZUT4 128 aa9.24□□□□□ -0.93
FANCA-220ENST00000566409 TIMM21Q9BVV7 248 aa9.24□□□□□ -0.93
FANCA-220ENST00000566409 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
FANCA-220ENST00000566409 C1orf196B1AJZ1 125 aa9.23□□□□□ -0.93
FANCA-220ENST00000566409 MAJINQ3KP22 176 aa9.23□□□□□ -0.93
FANCA-220ENST00000566409 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
FANCA-220ENST00000566409 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
FANCA-220ENST00000566409 F8W036 122 aa9.22□□□□□ -0.93
FANCA-220ENST00000566409 PHOX2AO14813 284 aa9.21□□□□□ -0.94
FANCA-220ENST00000566409 TCAPO15273 167 aa9.21□□□□□ -0.94
FANCA-220ENST00000566409 S100A8P05109 93 aa9.21□□□□□ -0.94
FANCA-220ENST00000566409 CARD19Q96LW7 228 aa9.21□□□□□ -0.94
FANCA-220ENST00000566409 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.94
FANCA-220ENST00000566409 ZNF561-AS1K7EIQ3 104 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 COX7A2LO14548 114 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 PPBPP02775 128 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 SMAGPQ0VAQ4 97 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 ATP5L2Q7Z4Y8 100 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 C5orf38Q86SI9 138 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 STPG4Q8N801 248 aa9.2□□□□□ -0.94
FANCA-220ENST00000566409 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
FANCA-220ENST00000566409 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
FANCA-220ENST00000566409 TMEM18Q96B42 140 aa9.19□□□□□ -0.94
FANCA-220ENST00000566409 Q6ZRU5 148 aa9.18□□□□□ -0.94
FANCA-220ENST00000566409 ORMDL3Q8N138 153 aa9.18□□□□□ -0.94
FANCA-220ENST00000566409 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
FANCA-220ENST00000566409 TNXBP22105 4242 aa9.18□□□□□ -0.94
FANCA-220ENST00000566409 MT1HL1P0DM35 61 aa9.17□□□□□ -0.94
FANCA-220ENST00000566409 MALP21145 153 aa9.17□□□□□ -0.94
FANCA-220ENST00000566409 MRPS36P82909 103 aaKnown RBP9.17□□□□□ -0.94
FANCA-220ENST00000566409 PNRC1Q12796 327 aaPredicted RBP9.17□□□□□ -0.94
FANCA-220ENST00000566409 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
FANCA-220ENST00000566409 SPANXA1Q9NS26 97 aa9.17□□□□□ -0.94
FANCA-220ENST00000566409 IGHV3OR16-9A0A0B4J2B5 98 aa9.16□□□□□ -0.94
FANCA-220ENST00000566409 RAB14P61106 215 aa9.16□□□□□ -0.94
FANCA-220ENST00000566409 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
FANCA-220ENST00000566409 PRSS47A8MTI9 375 aa9.15□□□□□ -0.94
FANCA-220ENST00000566409 MT-ND4LP03901 98 aa9.15□□□□□ -0.94
FANCA-220ENST00000566409 CLLU1Q5K131 121 aa9.15□□□□□ -0.94
FANCA-220ENST00000566409 C7orf33Q8WU49 177 aa9.15□□□□□ -0.94
FANCA-220ENST00000566409 LOC389332A0A1B0GUA5 103 aa9.14□□□□□ -0.95
FANCA-220ENST00000566409 PTTG1IPP53801 180 aa9.14□□□□□ -0.95
FANCA-220ENST00000566409 PRR3P79522 188 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms