RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ZNF25P17030 456 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-213ENST00000565834 Q8N976 141 aa12.9□□□□□ -0.34
COMMD4-213ENST00000565834 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
COMMD4-213ENST00000565834 TRAV12-1A0A0B4J245 112 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 MRPS36P82909 103 aaKnown RBP12.89□□□□□ -0.35
COMMD4-213ENST00000565834 PMVKQ15126 192 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 ESRGQ1W209 222 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 LINC01545Q5VT33 79 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 Q6ZUT4 128 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 OR5A1Q8NGJ0 315 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 TRAV8-6A0A0B4J262 113 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 NUPR2A6NF83 97 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 TMEM262E9PQX1 116 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 LGALS9CQ6DKI2 356 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 VCX2Q9H322 139 aa12.89□□□□□ -0.35
COMMD4-213ENST00000565834 DNAH7Q8WXX0 4024 aa12.88□□□□□ -0.35
COMMD4-213ENST00000565834 A0A087WX48 190 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 PRSS29PA6NIE9 313 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 ODF1Q14990 250 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 RNASE13Q5GAN3 156 aaKnown RBP12.87□□□□□ -0.35
COMMD4-213ENST00000565834 ZC2HC1BQ5TFG8 222 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 TEX43Q6ZNM6 134 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 C14orf144Q96I85 54 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 PMCHL2Q9BQD1 86 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 PRO1933Q9H354 126 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 CST9LQ9H4G1 147 aa12.87□□□□□ -0.35
COMMD4-213ENST00000565834 AMELXQ99217 191 aa12.86□□□□□ -0.35
COMMD4-213ENST00000565834 KLK5Q9Y337 293 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-213ENST00000565834 TGP01266 2768 aa12.86□□□□□ -0.35
COMMD4-213ENST00000565834 A0A1B0GUV1 79 aa12.86□□□□□ -0.35
COMMD4-213ENST00000565834 MPV17L2Q567V2 206 aa12.86□□□□□ -0.35
COMMD4-213ENST00000565834 CDC42SE2Q9NRR3 84 aa12.86□□□□□ -0.35
COMMD4-213ENST00000565834 CHTOPQ9Y3Y2 248 aaKnown RBP12.86□□□□□ -0.35
COMMD4-213ENST00000565834 IGLV4-60A0A075B6I1 120 aa12.85□□□□□ -0.35
COMMD4-213ENST00000565834 RBX1P62877 108 aa12.85□□□□□ -0.35
COMMD4-213ENST00000565834 C2orf88Q9BSF0 95 aa12.84□□□□□ -0.35
COMMD4-213ENST00000565834 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
COMMD4-213ENST00000565834 DYNC2H1Q8NCM8 4307 aaKnown RBP12.84□□□□□ -0.35
COMMD4-213ENST00000565834 F8VRH5 84 aa12.83□□□□□ -0.35
COMMD4-213ENST00000565834 CCL18P55774 89 aa12.83□□□□□ -0.35
COMMD4-213ENST00000565834 WFDC10BQ8IUB3 73 aa12.83□□□□□ -0.36
COMMD4-213ENST00000565834 ATOH7Q8N100 152 aa12.83□□□□□ -0.36
COMMD4-213ENST00000565834 VAMP8Q9BV40 100 aa12.83□□□□□ -0.36
COMMD4-213ENST00000565834 APLNQ9ULZ1 77 aa12.83□□□□□ -0.36
COMMD4-213ENST00000565834 DPM2O94777 84 aa12.81□□□□□ -0.36
COMMD4-213ENST00000565834 Q8N3U1 123 aa12.81□□□□□ -0.36
COMMD4-213ENST00000565834 MRPS16Q9Y3D3 137 aaKnown RBP12.81□□□□□ -0.36
COMMD4-213ENST00000565834 LINC00588Q9Y4M8 146 aa12.81□□□□□ -0.36
COMMD4-213ENST00000565834 CSMD3Q7Z407 3707 aa12.81□□□□□ -0.36
COMMD4-213ENST00000565834 IGKCP01834 107 aa12.8□□□□□ -0.36
COMMD4-213ENST00000565834 PLNP26678 52 aa12.8□□□□□ -0.36
COMMD4-213ENST00000565834 TCTAP57738 103 aa12.8□□□□□ -0.36
COMMD4-213ENST00000565834 IGLV4-69A0A075B6H9 119 aa12.79□□□□□ -0.36
COMMD4-213ENST00000565834 ANGP03950 147 aaKnown RBP12.79□□□□□ -0.36
COMMD4-213ENST00000565834 ZFAND6Q6FIF0 208 aa12.79□□□□□ -0.36
COMMD4-213ENST00000565834 UBE2D1P51668 147 aa12.78□□□□□ -0.36
COMMD4-213ENST00000565834 MUC7Q8TAX7 377 aa12.78□□□□□ -0.36
COMMD4-213ENST00000565834 TRAV13-1A0A0B4J241 112 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 IGKV3OR2-268A0A0C4DH90 116 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 A0A0J9YXV3 536 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 IGHV3-30P01768 117 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 IGHV3-33P01772 117 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 IGHV3-30-3P0DP02 117 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 IGHV3-30-5P0DP03 117 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 WWC2-AS2Q96NR7 200 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 MIEN1Q9BRT3 115 aa12.77□□□□□ -0.36
COMMD4-213ENST00000565834 IGLC3P0DOY3 106 aa12.77□□□□□ -0.37
COMMD4-213ENST00000565834 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.37
COMMD4-213ENST00000565834 C11orf86A6NJI1 115 aa12.76□□□□□ -0.37
COMMD4-213ENST00000565834 NFE4Q86UQ8 179 aa12.76□□□□□ -0.37
COMMD4-213ENST00000565834 LINC00269Q8N2A0 174 aa12.76□□□□□ -0.37
COMMD4-213ENST00000565834 TRAV9-2A0A087WT02 112 aa12.75□□□□□ -0.37
COMMD4-213ENST00000565834 M0R143 59 aa12.75□□□□□ -0.37
COMMD4-213ENST00000565834 LINC01556Q5JQF7 62 aa12.75□□□□□ -0.37
COMMD4-213ENST00000565834 CLPSL2Q6UWE3 100 aa12.75□□□□□ -0.37
COMMD4-213ENST00000565834 UPK3BQ9BT76 320 aa12.75□□□□□ -0.37
COMMD4-213ENST00000565834 TINCRA0A1B0GVN0 87 aa12.74□□□□□ -0.37
COMMD4-213ENST00000565834 UBE2DNLQ8IWF7 75 aa12.74□□□□□ -0.37
COMMD4-213ENST00000565834 KLK12Q9UKR0 248 aa12.74□□□□□ -0.37
COMMD4-213ENST00000565834 hDV102S1A0JD36 115 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 HSBP1L1C9JCN9 74 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 SIVA1O15304 175 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 DNAH10OSP0CZ25 163 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 SEC11AP67812 179 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 REG3AQ06141 175 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 MAJINQ3KP22 176 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 GEMIN7Q9H840 131 aaKnown RBP12.73□□□□□ -0.37
COMMD4-213ENST00000565834 LINC00959A0A1B0GUT2 108 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 LINC00242Q5T6M2 205 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 FAM19A3Q7Z5A8 133 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 PAM16Q9Y3D7 125 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 TENM2Q9NT68 2774 aa12.73□□□□□ -0.37
COMMD4-213ENST00000565834 STARD9Q9P2P6 4700 aa12.72□□□□□ -0.37
COMMD4-213ENST00000565834 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
COMMD4-213ENST00000565834 HERVK_113P63121 156 aa12.71□□□□□ -0.37
COMMD4-213ENST00000565834 SS18Q15532 418 aa12.71□□□□□ -0.37
COMMD4-213ENST00000565834 STPG4Q8N801 248 aa12.71□□□□□ -0.37
COMMD4-213ENST00000565834 ZNF22P17026 224 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-213ENST00000565834 PRR34Q9NV39 138 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms