RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 C7orf33Q8WU49 177 aa10.52□□□□□ -0.73
CCNF-203ENST00000564236 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
CCNF-203ENST00000564236 CDC42SE2Q9NRR3 84 aa10.52□□□□□ -0.73
CCNF-203ENST00000564236 TNXBP22105 4242 aa10.52□□□□□ -0.73
CCNF-203ENST00000564236 IGHV1-58A0A0C4DH39 117 aa10.51□□□□□ -0.73
CCNF-203ENST00000564236 TMEM242Q9NWH2 141 aa10.51□□□□□ -0.73
CCNF-203ENST00000564236 LINC00474Q9P2X8 69 aa10.51□□□□□ -0.73
CCNF-203ENST00000564236 PKIGQ9Y2B9 76 aa10.51□□□□□ -0.73
CCNF-203ENST00000564236 CCL25O15444 150 aa10.5□□□□□ -0.73
CCNF-203ENST00000564236 XCL1P47992 114 aa10.5□□□□□ -0.73
CCNF-203ENST00000564236 CD164L2Q6UWJ8 174 aa10.5□□□□□ -0.73
CCNF-203ENST00000564236 CSDC2Q9Y534 153 aaKnown RBP10.5□□□□□ -0.73
CCNF-203ENST00000564236 UBR4Q5T4S7 5183 aa10.49□□□□□ -0.73
CCNF-203ENST00000564236 A0A096LNI7 61 aa10.49□□□□□ -0.73
CCNF-203ENST00000564236 C7orf77A4D0Y5 90 aa10.49□□□□□ -0.73
CCNF-203ENST00000564236 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
CCNF-203ENST00000564236 CEBPGP53567 150 aa10.49□□□□□ -0.73
CCNF-203ENST00000564236 MAJINQ3KP22 176 aa10.49□□□□□ -0.73
CCNF-203ENST00000564236 EIF5A2Q9GZV4 153 aaKnown RBP10.49□□□□□ -0.73
CCNF-203ENST00000564236 V9GYV3 84 aa10.49□□□□□ -0.73
CCNF-203ENST00000564236 ZNF727A8MUV8 499 aa10.48□□□□□ -0.73
CCNF-203ENST00000564236 PPP1R17O96001 155 aa10.48□□□□□ -0.73
CCNF-203ENST00000564236 PRR3P79522 188 aaKnown RBP10.48□□□□□ -0.73
CCNF-203ENST00000564236 SS18Q15532 418 aa10.48□□□□□ -0.73
CCNF-203ENST00000564236 AMN1Q8IY45 258 aa10.48□□□□□ -0.73
CCNF-203ENST00000564236 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
CCNF-203ENST00000564236 STPG4Q8N801 248 aa10.48□□□□□ -0.73
CCNF-203ENST00000564236 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
CCNF-203ENST00000564236 VCYO14598 125 aa10.47□□□□□ -0.73
CCNF-203ENST00000564236 NRACQ8N912 160 aa10.47□□□□□ -0.73
CCNF-203ENST00000564236 NUP35Q8NFH5 326 aa10.47□□□□□ -0.73
CCNF-203ENST00000564236 RIGQ13278 110 aa10.46□□□□□ -0.73
CCNF-203ENST00000564236 ISOC2Q96AB3 205 aa10.46□□□□□ -0.73
CCNF-203ENST00000564236 CARD19Q96LW7 228 aa10.46□□□□□ -0.73
CCNF-203ENST00000564236 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
CCNF-203ENST00000564236 FAM74A3Q4VXF1 159 aa10.45□□□□□ -0.74
CCNF-203ENST00000564236 LINC01600Q96MT4 127 aa10.45□□□□□ -0.74
CCNF-203ENST00000564236 UBE2D4Q9Y2X8 147 aa10.45□□□□□ -0.74
CCNF-203ENST00000564236 C1orf196B1AJZ1 125 aa10.44□□□□□ -0.74
CCNF-203ENST00000564236 SYCNQ0VAF6 134 aa10.44□□□□□ -0.74
CCNF-203ENST00000564236 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
CCNF-203ENST00000564236 NAT8BQ9UHF3 227 aa10.44□□□□□ -0.74
CCNF-203ENST00000564236 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
CCNF-203ENST00000564236 PPP1R2P9O14990 202 aa10.43□□□□□ -0.74
CCNF-203ENST00000564236 RPL32P62910 135 aaKnown RBP10.43□□□□□ -0.74
CCNF-203ENST00000564236 LINC00526Q96FQ7 95 aa10.43□□□□□ -0.74
CCNF-203ENST00000564236 TIMM21Q9BVV7 248 aa10.43□□□□□ -0.74
CCNF-203ENST00000564236 TRBV24-1A0A075B6N3 115 aa10.42□□□□□ -0.74
CCNF-203ENST00000564236 FCER1GP30273 86 aa10.42□□□□□ -0.74
CCNF-203ENST00000564236 CAMPP49913 170 aa10.42□□□□□ -0.74
CCNF-203ENST00000564236 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
CCNF-203ENST00000564236 TMEM241Q24JQ0 296 aa10.42□□□□□ -0.74
CCNF-203ENST00000564236 FAM104BQ5XKR9 115 aa10.42□□□□□ -0.74
CCNF-203ENST00000564236 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
CCNF-203ENST00000564236 hCG_2014768A0A024R1R8 64 aa10.41□□□□□ -0.74
CCNF-203ENST00000564236 SMIM27A0A1W2PRY6 76 aa10.41□□□□□ -0.74
CCNF-203ENST00000564236 LINC00862A6NCI5 91 aa10.41□□□□□ -0.74
CCNF-203ENST00000564236 SMKR1H3BMG3 65 aa10.41□□□□□ -0.74
CCNF-203ENST00000564236 C20orf78Q9BR46 151 aa10.41□□□□□ -0.74
CCNF-203ENST00000564236 A0A1B0GW15 77 aa10.4□□□□□ -0.74
CCNF-203ENST00000564236 COX7A2LO14548 114 aa10.4□□□□□ -0.74
CCNF-203ENST00000564236 PTTG1IPP53801 180 aa10.4□□□□□ -0.74
CCNF-203ENST00000564236 SRSF9Q13242 221 aaKnown RBP eCLIP10.4□□□□□ -0.74
CCNF-203ENST00000564236 MRPL51Q4U2R6 128 aaKnown RBP10.4□□□□□ -0.74
CCNF-203ENST00000564236 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.74
CCNF-203ENST00000564236 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
CCNF-203ENST00000564236 TCAPO15273 167 aa10.39□□□□□ -0.75
CCNF-203ENST00000564236 C2orf48Q96LS8 159 aa10.39□□□□□ -0.75
CCNF-203ENST00000564236 SMDT1Q9H4I9 107 aa10.39□□□□□ -0.75
CCNF-203ENST00000564236 NAT8Q9UHE5 227 aa10.39□□□□□ -0.75
CCNF-203ENST00000564236 LOC107984640A0A0U1RRK4 108 aa10.38□□□□□ -0.75
CCNF-203ENST00000564236 C9JQL5 133 aa10.38□□□□□ -0.75
CCNF-203ENST00000564236 Q6ZRP5 223 aa10.38□□□□□ -0.75
CCNF-203ENST00000564236 TMEM18Q96B42 140 aa10.38□□□□□ -0.75
CCNF-203ENST00000564236 A0A0J9YXV3 536 aa10.37□□□□□ -0.75
CCNF-203ENST00000564236 APOMO95445 188 aa10.37□□□□□ -0.75
CCNF-203ENST00000564236 MALP21145 153 aa10.37□□□□□ -0.75
CCNF-203ENST00000564236 Q6ZUT4 128 aa10.37□□□□□ -0.75
CCNF-203ENST00000564236 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
CCNF-203ENST00000564236 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
CCNF-203ENST00000564236 ADIRFQ15847 76 aa10.36□□□□□ -0.75
CCNF-203ENST00000564236 RNF151Q2KHN1 245 aa10.36□□□□□ -0.75
CCNF-203ENST00000564236 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
CCNF-203ENST00000564236 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
CCNF-203ENST00000564236 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
CCNF-203ENST00000564236 REG3GQ6UW15 175 aa10.35□□□□□ -0.75
CCNF-203ENST00000564236 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
CCNF-203ENST00000564236 A0A1B0GXF2 115 aa10.34□□□□□ -0.75
CCNF-203ENST00000564236 F8WDY8 70 aa10.34□□□□□ -0.75
CCNF-203ENST00000564236 TNFRSF6BO95407 300 aa10.34□□□□□ -0.75
CCNF-203ENST00000564236 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
CCNF-203ENST00000564236 OR10D4PQ8NGN7 298 aa10.34□□□□□ -0.75
CCNF-203ENST00000564236 SPANXA1Q9NS26 97 aa10.34□□□□□ -0.75
CCNF-203ENST00000564236 LRP2P98164 4655 aa10.33□□□□□ -0.76
CCNF-203ENST00000564236 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
CCNF-203ENST00000564236 A0A1W2PNN7 141 aa10.33□□□□□ -0.76
CCNF-203ENST00000564236 S100A8P05109 93 aa10.33□□□□□ -0.76
CCNF-203ENST00000564236 CKS2P33552 79 aa10.33□□□□□ -0.76
CCNF-203ENST00000564236 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
CCNF-203ENST00000564236 GAGE2BQ13066 116 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms