RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 TNRC6BQ9UPQ9 1833 aaKnown RBP3.21□□□□□ -1.9
SMG1-207ENST00000563235 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 HCG22E2RYF7 251 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 ARL14EPLP0DKL9 152 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 NTM-AS1Q6ZSK4 140 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 RPRMLQ8N4K4 120 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 C15orf56Q8N910 161 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 CHCHD7Q9BUK0 85 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 GFRA4Q9GZZ7 299 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 UBR5O95071 2799 aaPredicted RBP3.21□□□□□ -1.9
SMG1-207ENST00000563235 A0A096LNJ9 63 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 MYO7AQ13402 2215 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 IGLV1-50A0A075B6I6 118 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 TRBV7-3A0A075B6L6 115 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 IGHV1-8P0DP01 117 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 SDIM1Q6ZPB5 146 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 Q6ZR03 302 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 Q8N1X5 172 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 DOCK11Q5JSL3 2073 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 COL6A6A6NMZ7 2263 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 DSPP15924 2871 aaKnown RBP3.2□□□□□ -1.9
SMG1-207ENST00000563235 TMSB15BA0A087X1C1 80 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 A0A0B4J2C4 111 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 CLPSP04118 112 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 IAPPP10997 89 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 LPAL2Q16609 132 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 ASB16-AS1Q495Z4 193 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 SMIM29Q86T20 159 aa3.2□□□□□ -1.9
SMG1-207ENST00000563235 ABCA12Q86UK0 2595 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 VPS13AQ96RL7 3174 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 PIEZO2Q9H5I5 2752 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 C17orf98A8MV24 154 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 BPY2O14599 106 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 NPYP01303 97 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 INSP01308 110 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 IGLV3-21P80748 117 aaPredicted RBP3.19□□□□□ -1.9
SMG1-207ENST00000563235 TMEM170BQ5T4T1 132 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 SPANXN1Q5VSR9 72 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 TMEM167BQ9NRX6 74 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 TRBV25-1A0A075B6N4 114 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 hDV103S1A0JD37 113 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 A8MUU9 505 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 IQCF6A8MYZ5 107 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 SPANXN5Q5MJ07 72 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 COX14Q96I36 57 aa3.19□□□□□ -1.9
SMG1-207ENST00000563235 CEP192Q8TEP8 1941 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 IGHV3-73A0A0B4J1V6 119 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 A6NDX4 124 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 C10orf142B7Z368 130 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 ACYP1P07311 99 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 UBE2D1P51668 147 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 RPL36AP83881 106 aaKnown RBP3.18□□□□□ -1.9
SMG1-207ENST00000563235 EIF4EBP1Q13541 118 aaPredicted RBP3.18□□□□□ -1.9
SMG1-207ENST00000563235 C9orf116Q5BN46 136 aaPredicted RBP3.18□□□□□ -1.9
SMG1-207ENST00000563235 DEFB121Q5J5C9 76 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 Q6ZQT0 140 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 Q8N9W7 124 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 MPDZO75970 2070 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 IGKV1OR2-108A0A075B7D4 117 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 IGHV3-15A0A0B4J1V0 119 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 NDUFC1O43677 76 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 LHBP01229 141 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 KLKP1Q107X0 134 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 FXYD3Q14802 87 aa3.18□□□□□ -1.9
SMG1-207ENST00000563235 SMG1Q96Q15 3661 aaKnown RBP3.18□□□□□ -1.9
SMG1-207ENST00000563235 PCDH15Q96QU1 1955 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 CFAP46Q8IYW2 2715 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 MGST1P10620 155 aaKnown RBP3.17□□□□□ -1.9
SMG1-207ENST00000563235 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 C9orf106Q8NAJ2 232 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 TRBV7-1A0A0A6YYK4 115 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 TRAV22A0A0B4J277 110 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 TEX49A0A1B0GTD5 131 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 FAM223BA6NKX1 122 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 HIGD1CA8MV81 97 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 SPINK4O60575 86 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 FAM27BQ5VT28 67 aa3.17□□□□□ -1.9
SMG1-207ENST00000563235 SPTAN1Q13813 2472 aaKnown RBP3.17□□□□□ -1.9
SMG1-207ENST00000563235 IGKV1D-37A0A075B6S9 117 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 MYMXA0A1B0GTQ4 84 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 P0C880 135 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 DEFB124Q8NES8 71 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 ICOSQ9Y6W8 199 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 FREM3P0C091 2139 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 AKAP13Q12802 2813 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 E7EUB6 86 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 FSHBP01225 129 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 IFI27L1Q96BM0 104 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 SMAD5-AS1Q9Y6J3 95 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 MALRD1Q5VYJ5 2156 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 KLHL30-AS1Q8NEE0 82 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
SMG1-207ENST00000563235 SHANK1Q9Y566 2161 aa3.16□□□□□ -1.9
SMG1-207ENST00000563235 SPAG17Q6Q759 2223 aa3.15□□□□□ -1.9
SMG1-207ENST00000563235 TRBV6-1A0A0K0K1D8 114 aa3.15□□□□□ -1.9
SMG1-207ENST00000563235 IGHV1-46P01743 117 aa3.15□□□□□ -1.9
SMG1-207ENST00000563235 IL4P05112 153 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms