RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 DEFB114Q30KQ6 69 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 Q8IYB0 196 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 TCTEX1D1Q8N7M0 179 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 GPX7Q96SL4 187 aaPredicted RBP1.88□□□□□ -2.11
SMG1-204ENST00000561940 DNAH6Q9C0G6 4158 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 FSIP2Q5CZC0 6907 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 FAT1Q14517 4588 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 IGKV2D-26A0A0A0MRZ7 120 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 TEX261Q6UWH6 196 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 C4orf33Q8N1A6 199 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 DYDC1Q8WWB3 177 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 CALML5Q9NZT1 146 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 LINC00312Q9Y6C7 94 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 U3KQ87 197 aa1.87□□□□□ -2.11
SMG1-204ENST00000561940 A0A1B0GV72 72 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 A0A1B0GWA3 101 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 CCDC160A6NGH7 325 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 HMGN4O00479 90 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 HEPN1Q6WQI6 88 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 ZCCHC23Q6ZST2 131 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 ANGPTL5Q86XS5 388 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 Q8N6K4 173 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 OR5D14Q8NGL3 314 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 OR4K15Q8NH41 348 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 TP53RKQ96S44 253 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 MAP1LC3BQ9GZQ8 125 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 WFDC10AQ9H1F0 79 aa1.86□□□□□ -2.11
SMG1-204ENST00000561940 CACYBPQ9HB71 228 aaKnown RBP1.86□□□□□ -2.11
SMG1-204ENST00000561940 MAP1LC3B2A6NCE7 125 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 ZNF736B4DX44 427 aaPredicted RBP1.85□□□□□ -2.11
SMG1-204ENST00000561940 G3V318 75 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 RER1O15258 196 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 TMBIM6P55061 237 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 RTL8BQ17RB0 113 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 SMIM21Q3B7S5 101 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 FAM74A1Q5RGS3 127 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 DYNLRB2Q8TF09 96 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 MPC1Q9Y5U8 109 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 NUBP2Q9Y5Y2 271 aa1.85□□□□□ -2.11
SMG1-204ENST00000561940 LOC110117498A0A087WWA1 95 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 H3BUA1 57 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 GPR31O00270 319 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 DEFB4AO15263 64 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 HIST1H2BKO60814 126 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 CSN2P05814 226 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 HIST1H2BJP06899 126 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 TSPAN19P0C672 248 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 PIPP12273 146 aaPredicted RBP1.84□□□□□ -2.11
SMG1-204ENST00000561940 RAB5CP51148 216 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 EDDM3BP56851 147 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 ROMO1P60602 79 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 RPS27LQ71UM5 84 aaKnown RBP1.84□□□□□ -2.11
SMG1-204ENST00000561940 Q8N814 137 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 ZNF431Q8TF32 576 aaPredicted RBP1.84□□□□□ -2.11
SMG1-204ENST00000561940 MAGOHBQ96A72 148 aaKnown RBP1.84□□□□□ -2.11
SMG1-204ENST00000561940 CST11Q9H112 138 aa1.84□□□□□ -2.11
SMG1-204ENST00000561940 VPS13BQ7Z7G8 4022 aa1.84□□□□□ -2.12
SMG1-204ENST00000561940 E7EUB6 86 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 CST7O76096 145 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 TFF1P04155 84 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 CXCL1P09341 107 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 CBLN1P23435 193 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 CCL18P55774 89 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 CNBPP62633 177 aaKnown RBP1.83□□□□□ -2.12
SMG1-204ENST00000561940 LTC4SQ16873 150 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 C3orf62Q6ZUJ4 267 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 SPTSSAQ969W0 71 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 LINC00526Q96FQ7 95 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 USMG5Q96IX5 58 aa1.83□□□□□ -2.12
SMG1-204ENST00000561940 TRBV6-7A0A0A0MS04 114 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 M0R135 149 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 PGRMC1O00264 195 aaKnown RBP1.82□□□□□ -2.12
SMG1-204ENST00000561940 TPPP2P59282 170 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 CDK6Q00534 326 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 SPCS2Q15005 226 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 GLYATL3Q5SZD4 288 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 PATE2Q6UY27 113 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 SMIM15Q7Z3B0 74 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 CTAGE3PQ8IX95 158 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 OR5A2Q8NGI9 324 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 CHCHD1Q96BP2 118 aaKnown RBP1.82□□□□□ -2.12
SMG1-204ENST00000561940 PPP3R2Q96LZ3 170 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 CCDC32Q9BV29 185 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 OR52A1Q9UKL2 312 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 PKHD1L1Q86WI1 4243 aa1.82□□□□□ -2.12
SMG1-204ENST00000561940 A0A087WTM6 91 aa1.81□□□□□ -2.12
SMG1-204ENST00000561940 A0A1B0GW64 132 aa1.81□□□□□ -2.12
SMG1-204ENST00000561940 PRORSD1PA6NEY8 169 aa1.81□□□□□ -2.12
SMG1-204ENST00000561940 KPNA4O00629 521 aaPredicted RBP1.81□□□□□ -2.12
SMG1-204ENST00000561940 SPART-AS1P0CW21 52 aa1.81□□□□□ -2.12
SMG1-204ENST00000561940 RPL38P63173 70 aaKnown RBP1.81□□□□□ -2.12
SMG1-204ENST00000561940 HBBP68871 147 aa1.81□□□□□ -2.12
SMG1-204ENST00000561940 MPV17LQ2QL34 196 aa1.81□□□□□ -2.12
SMG1-204ENST00000561940 TMEM78Q5T7P6 136 aa1.81□□□□□ -2.12
SMG1-204ENST00000561940 HAGHLQ6PII5 290 aaPredicted RBP1.81□□□□□ -2.12
SMG1-204ENST00000561940 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
SMG1-204ENST00000561940 TMEM189A5PLL7 270 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 OR2T8A6NH00 312 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 INE1O15225 51 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms