RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 PTPRQQ9UMZ3 2332 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 CACNA1AO00555 2505 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 TRBV7-3A0A075B6L6 115 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 A0A1B0GV90 55 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 MGST2Q99735 147 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 U3KQA8 63 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 V9GYH0 126 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 KTN1Q86UP2 1357 aaKnown RBP0.01□□□□□ -2.41
CHD9-204ENST00000561869 ROBO1Q9Y6N7 1651 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 PLXNB2O15031 1838 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 WNK3Q9BYP7 1800 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 CTXND1A0A1B0GTU2 59 aa0□□□□□ -2.41
CHD9-204ENST00000561869 OOSP1A8MZH6 123 aa0□□□□□ -2.41
CHD9-204ENST00000561869 LRP6O75581 1613 aa0□□□□□ -2.41
CHD9-204ENST00000561869 IFNGP01579 166 aa0□□□□□ -2.41
CHD9-204ENST00000561869 MYOM1P52179 1685 aa0□□□□□ -2.41
CHD9-204ENST00000561869 MYOM2P54296 1465 aa0□□□□□ -2.41
CHD9-204ENST00000561869 COX17Q14061 63 aa0□□□□□ -2.41
CHD9-204ENST00000561869 CUL7Q14999 1698 aa0□□□□□ -2.41
CHD9-204ENST00000561869 C2orf88Q9BSF0 95 aa0□□□□□ -2.41
CHD9-204ENST00000561869 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
CHD9-204ENST00000561869 DYNLRB1Q9NP97 96 aa0□□□□□ -2.41
CHD9-204ENST00000561869 STAB1Q9NY15 2570 aa0□□□□□ -2.41
CHD9-204ENST00000561869 LINC00474Q9P2X8 69 aa0□□□□□ -2.41
CHD9-204ENST00000561869 PRO0255Q9UI72 69 aa0□□□□□ -2.41
CHD9-204ENST00000561869 ZNF236Q9UL36 1845 aa0□□□□□ -2.41
CHD9-204ENST00000561869 IER3IP1Q9Y5U9 82 aa0□□□□□ -2.41
CHD9-204ENST00000561869 CHD6Q8TD26 2715 aa-0□□□□□ -2.41
CHD9-204ENST00000561869 PTPN13Q12923 2485 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 PKDREJQ9NTG1 2253 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 KIF21AQ7Z4S6 1674 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 EIF4G3O43432 1585 aaKnown RBP-0.01□□□□□ -2.41
CHD9-204ENST00000561869 SMG6Q86US8 1419 aaKnown RBP-0.01□□□□□ -2.41
CHD9-204ENST00000561869 F8VRH5 84 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 I3L2K1 104 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 CORTO00230 105 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 HMGN4O00479 90 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 UQCR11O14957 56 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 BCE1O60756 84 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 MRPL54Q6P161 138 aaKnown RBP-0.01□□□□□ -2.41
CHD9-204ENST00000561869 BAGE2Q86Y30 109 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 TSLPQ969D9 159 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 LINC01558Q9Y6Z2 57 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 SPTBN1Q01082 2364 aaKnown RBP-0.01□□□□□ -2.41
CHD9-204ENST00000561869 DOPEY2Q9Y3R5 2298 aa-0.01□□□□□ -2.41
CHD9-204ENST00000561869 NHSL1Q5SYE7 1610 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 GOLGA4Q13439 2230 aaKnown RBP-0.02□□□□□ -2.41
CHD9-204ENST00000561869 C10orf71Q711Q0 1435 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 NCOA3Q9Y6Q9 1424 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 MYO7BQ6PIF6 2116 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 VWFP04275 2813 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 PIEZO2Q9H5I5 2752 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 UBE2L5PA0A1B0GUS4 154 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 LOC285095A0A1B0GVY8 99 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 IGLC7A0M8Q6 106 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 ATP5EP56381 51 aaPredicted RBP-0.02□□□□□ -2.41
CHD9-204ENST00000561869 TPPP2P59282 170 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 UBE2L3P68036 154 aaKnown RBP-0.02□□□□□ -2.41
CHD9-204ENST00000561869 WFDC2Q14508 124 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 C9orf153Q5TBE3 101 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 DPH3P1Q9H4G8 78 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 NPVFQ9HCQ7 196 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 SPCS1Q9Y6A9 102 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 GVINP1Q7Z2Y8 2422 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 HMCN2Q8NDA2 5059 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 NSD1Q96L73 2696 aaPredicted RBP-0.02□□□□□ -2.41
CHD9-204ENST00000561869 ARHGEF5Q12774 1597 aa-0.02□□□□□ -2.41
CHD9-204ENST00000561869 WDR7Q9Y4E6 1490 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 PSME4Q14997 1843 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 SBF2Q86WG5 1849 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 FLNCQ14315 2725 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 USF3Q68DE3 2245 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 BSNQ9UPA5 3926 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 LINC00587B1AMM8 73 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 GNG4P50150 75 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 HAMPP81172 84 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 TMEM170BQ5T4T1 132 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 Q5VSD8 79 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 MYOZ3Q8TDC0 251 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 TMEM203Q969S6 136 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 SPRR4Q96PI1 79 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 CDC42SE2Q9NRR3 84 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 RAPGEF6Q8TEU7 1601 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 PKD1L1Q8TDX9 2849 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 MAPKBP1O60336 1514 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 LPAP08519 4548 aa-0.03□□□□□ -2.41
CHD9-204ENST00000561869 TENM4Q6N022 2769 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 FAT2Q9NYQ8 4349 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 TRAV22A0A0B4J277 110 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 F6UZH7 168 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 M0R3E3 92 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 APOC3P02656 99 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 Q6JHZ5 121 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 Q8IZM0 81 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 FAM167A-AS1Q96KT0 104 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 TP53AIP1Q9HCN2 124 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 ERCC6L2Q5T890 1561 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 RYR2Q92736 4967 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 MYCBP2O75592 4640 aa-0.04□□□□□ -2.42
CHD9-204ENST00000561869 HMGXB3Q12766 1538 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms