RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 I3L3M4 83 aa9.64□□□□□ -0.87
USP3-221ENST00000561442 KRTDAPP60985 99 aa9.64□□□□□ -0.87
USP3-221ENST00000561442 NFE4Q86UQ8 179 aa9.64□□□□□ -0.87
USP3-221ENST00000561442 ORMDL3Q8N138 153 aa9.64□□□□□ -0.87
USP3-221ENST00000561442 Q8N976 141 aa9.64□□□□□ -0.87
USP3-221ENST00000561442 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
USP3-221ENST00000561442 PKHD1P08F94 4074 aa9.63□□□□□ -0.87
USP3-221ENST00000561442 UBE2L6O14933 153 aa9.63□□□□□ -0.87
USP3-221ENST00000561442 PPP1R17O96001 155 aa9.63□□□□□ -0.87
USP3-221ENST00000561442 C3orf79P0CE67 100 aa9.63□□□□□ -0.87
USP3-221ENST00000561442 POLR2KP53803 58 aaKnown RBP9.63□□□□□ -0.87
USP3-221ENST00000561442 SUMO2P61956 95 aaKnown RBP9.63□□□□□ -0.87
USP3-221ENST00000561442 RBX1P62877 108 aa9.63□□□□□ -0.87
USP3-221ENST00000561442 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
USP3-221ENST00000561442 TNFRSF6BO95407 300 aa9.62□□□□□ -0.87
USP3-221ENST00000561442 TSHBP01222 138 aa9.62□□□□□ -0.87
USP3-221ENST00000561442 LAGE3Q14657 143 aa9.62□□□□□ -0.87
USP3-221ENST00000561442 UBE2WQ96B02 151 aa9.62□□□□□ -0.87
USP3-221ENST00000561442 PRO1933Q9H354 126 aa9.62□□□□□ -0.87
USP3-221ENST00000561442 AP5S1Q9NUS5 200 aa9.62□□□□□ -0.87
USP3-221ENST00000561442 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
USP3-221ENST00000561442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.61□□□□□ -0.87
USP3-221ENST00000561442 IGKV2-29A2NJV5 120 aaPredicted RBP9.61□□□□□ -0.87
USP3-221ENST00000561442 VCYO14598 125 aa9.61□□□□□ -0.87
USP3-221ENST00000561442 LEPROTL1O95214 131 aa9.61□□□□□ -0.87
USP3-221ENST00000561442 NPYP01303 97 aa9.61□□□□□ -0.87
USP3-221ENST00000561442 ANGP03950 147 aaKnown RBP9.61□□□□□ -0.87
USP3-221ENST00000561442 FA2HQ7L5A8 372 aa9.61□□□□□ -0.87
USP3-221ENST00000561442 URB1-AS1Q96HZ7 61 aa9.61□□□□□ -0.87
USP3-221ENST00000561442 C14orf144Q96I85 54 aa9.61□□□□□ -0.87
USP3-221ENST00000561442 TRAV8-3A0A0A6YYJ7 113 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 TRBV27A0A0K0K1C4 114 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 PET117Q6UWS5 81 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 PRSS3P2Q8NHM4 247 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 PRELID3AQ96N28 172 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
USP3-221ENST00000561442 PSCAO43653 123 aa9.59□□□□□ -0.87
USP3-221ENST00000561442 FCER1GP30273 86 aa9.59□□□□□ -0.87
USP3-221ENST00000561442 SPATA12Q7Z6I5 190 aa9.59□□□□□ -0.87
USP3-221ENST00000561442 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
USP3-221ENST00000561442 MAP1LC3CQ9BXW4 147 aa9.59□□□□□ -0.87
USP3-221ENST00000561442 DNAH5Q8TE73 4624 aa9.59□□□□□ -0.87
USP3-221ENST00000561442 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
USP3-221ENST00000561442 LINC01546A6NGU7 62 aa9.58□□□□□ -0.88
USP3-221ENST00000561442 CRPP02741 224 aa9.58□□□□□ -0.88
USP3-221ENST00000561442 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
USP3-221ENST00000561442 LINC00269Q8N2A0 174 aa9.58□□□□□ -0.88
USP3-221ENST00000561442 C20orf203Q8NBC4 194 aa9.58□□□□□ -0.88
USP3-221ENST00000561442 SMIM2Q9BVW6 85 aa9.58□□□□□ -0.88
USP3-221ENST00000561442 BIRC6Q9NR09 4857 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 IGKV2D-24A0A075B6R9 120 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 KIR2DL4Q99706 377 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 C2orf88Q9BSF0 95 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 TM2D2Q9BX73 214 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
USP3-221ENST00000561442 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
USP3-221ENST00000561442 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
USP3-221ENST00000561442 SYS1-DBNDD2H3BUS1 97 aa9.56□□□□□ -0.88
USP3-221ENST00000561442 FGF6P10767 208 aa9.56□□□□□ -0.88
USP3-221ENST00000561442 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
USP3-221ENST00000561442 RMI2Q96E14 147 aa9.56□□□□□ -0.88
USP3-221ENST00000561442 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
USP3-221ENST00000561442 LRP1BQ9NZR2 4599 aa9.55□□□□□ -0.88
USP3-221ENST00000561442 A0A087WTM6 91 aa9.55□□□□□ -0.88
USP3-221ENST00000561442 A0A1B0GUV1 79 aa9.55□□□□□ -0.88
USP3-221ENST00000561442 TCAPO15273 167 aa9.55□□□□□ -0.88
USP3-221ENST00000561442 SPATA45Q537H7 98 aa9.55□□□□□ -0.88
USP3-221ENST00000561442 PAM16Q9Y3D7 125 aa9.55□□□□□ -0.88
USP3-221ENST00000561442 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
USP3-221ENST00000561442 H7C423 109 aa9.54□□□□□ -0.88
USP3-221ENST00000561442 M0R143 59 aa9.54□□□□□ -0.88
USP3-221ENST00000561442 REG3AQ06141 175 aa9.54□□□□□ -0.88
USP3-221ENST00000561442 C1orf43Q9BWL3 253 aa9.54□□□□□ -0.88
USP3-221ENST00000561442 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
USP3-221ENST00000561442 IGLV10-54A0A075B6I4 117 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 HSBP1L1C9JCN9 74 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 K7EMI3 77 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 EREGO14944 169 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 LECT2O14960 151 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 HBDP02042 147 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 FUSP35637 526 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP3-221ENST00000561442 MIAQ16674 131 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
USP3-221ENST00000561442 IGLC3P0DOY3 106 aa9.52□□□□□ -0.89
USP3-221ENST00000561442 IFI27P40305 119 aaPredicted RBP9.52□□□□□ -0.89
USP3-221ENST00000561442 KRTAP10-2P60368 255 aa9.52□□□□□ -0.89
USP3-221ENST00000561442 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
USP3-221ENST00000561442 OR5A1Q8NGJ0 315 aa9.52□□□□□ -0.89
USP3-221ENST00000561442 TMEM101Q96IK0 257 aa9.52□□□□□ -0.89
USP3-221ENST00000561442 COX11Q9Y6N1 276 aa9.52□□□□□ -0.89
USP3-221ENST00000561442 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
USP3-221ENST00000561442 ZNF25P17030 456 aaPredicted RBP9.51□□□□□ -0.89
USP3-221ENST00000561442 WFDC2Q14508 124 aa9.51□□□□□ -0.89
USP3-221ENST00000561442 Q8N8P6 123 aa9.51□□□□□ -0.89
USP3-221ENST00000561442 BAALCQ8WXS3 180 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms