RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	TRBV6-6	A0A0A6YYG2	114 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	TRAV1-2	A0A0B4J238	106 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431		H3BQ15	152 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431		H3BT86	120 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431		K7EP34	96 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	YPEL1	O60688	119 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	IGKV1D-33	P01593	117 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	IGKV1-33	P01594	117 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	KRTAP1-4	P0C5Y4	121 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	TRGC1	P0CF51	173 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	SNRPD3	P62318	126 aa	Known RBP	2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	HIST1H4A	P62805	103 aa	Known RBP	2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	C2orf83	Q53S99	150 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	C10orf91	Q5T1B1	145 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	KPRP	Q5T749	579 aa	Predicted RBP	2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	ZNF833P	Q6ZTB9	187 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	NDUFA11	Q86Y39	141 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431		Q8N9W7	124 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	DIRC1	Q969H9	104 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	ARHGAP5-AS1	Q96IT6	56 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	CAMK2N2	Q96S95	79 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	SLC35B3	Q9H1N7	401 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	XAGE1A	Q9HD64	81 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	SLC39A9	Q9NUM3	307 aa		2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	TXNL4B	Q9NX01	149 aa	Known RBP	2.71	□□□□□ -1.98
LRRC28-222	ENST00000561431	TG	P01266	2768 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	TET2	Q6N021	2002 aa	Predicted RBP	2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431		A0A0D9SG52	128 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431		K7ERJ3	54 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	HBD	P02042	147 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	MT-ATP8	P03928	68 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	SAA2	P0DJI9	122 aa	Predicted RBP	2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	SNCA	P37840	140 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	CSN1S1	P47710	185 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	RPL39P5	Q59GN2	51 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	UNQ5815/PRO19632	Q6UWF5	114 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	PCP2	Q8IVA1	136 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	TMEM183A	Q8IXX5	376 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	NABP2	Q9BQ15	211 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	NPVF	Q9HCQ7	196 aa		2.7	□□□□□ -1.98
LRRC28-222	ENST00000561431	TRBV6-7	A0A0A0MS04	114 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	IGHV7-4-1	A0A0J9YVY3	117 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431		A8MWL6	223 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	PITX3	O75364	302 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	NDUFA3	O95167	84 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	TRAC	P01848	142 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	NPPC	P23582	126 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	KRTAP10-8	P60410	259 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	RPL30	P62888	115 aa	Known RBP	2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	DEFA5	Q01523	94 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	CAMK2N1	Q7Z7J9	78 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	DAND5	Q8N907	189 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	WFDC9	Q8NEX5	89 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	MYOZ3	Q8TDC0	251 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	HIST1H2BL	Q99880	126 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	C8orf17	Q9NRJ1	99 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	ABRACL	Q9P1F3	81 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	UQCR10	Q9UDW1	63 aa		2.69	□□□□□ -1.98
LRRC28-222	ENST00000561431	CMYA5	Q8N3K9	4069 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	IGHV3-66	A0A0C4DH42	116 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	TCRBV4S1A1T	A0A5B7	111 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	C7orf66	A4D0T2	115 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	NDUFB6	O95139	128 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	PRB2	P02812	416 aa	Predicted RBP	2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	IGKV1-16	P04430	117 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	ASIP	P42127	132 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	RPL27A	P46776	148 aa	Known RBP	2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	LSM3	P62310	102 aa	Known RBP	2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	MRPS36	P82909	103 aa	Known RBP	2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	AKR1C1	Q04828	323 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	FAM104B	Q5XKR9	115 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	ALKAL2	Q6UX46	152 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	LSM10	Q969L4	123 aa	Known RBP	2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	EPDR1	Q9UM22	224 aa		2.68	□□□□□ -1.98
LRRC28-222	ENST00000561431	PRKDC	P78527	4128 aa	Known RBP	2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	COL7A1	Q02388	2944 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	IGLC7	A0M8Q6	106 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	TMEM235	A6NFC5	223 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431		F8W1H4	67 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431		G3V318	75 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	SSSCA1	O60232	199 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	SFT2D2	O95562	160 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	CD3D	P04234	171 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	NMB	P08949	121 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	ZNF688	P0C7X2	276 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	HLA-DMB	P28068	263 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	UBE2A	P49459	152 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	NPC2	P61916	151 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	EIF4EBP1	Q13541	118 aa	Predicted RBP	2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	DEFB136	Q30KP8	78 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	TDRG1	Q3Y452	100 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	MRPL51	Q4U2R6	128 aa	Known RBP	2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	RNASE13	Q5GAN3	156 aa	Known RBP	2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	KIAA2026	Q5HYC2	2103 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	MIR17HG	Q75NE6	70 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	C20orf203	Q8NBC4	194 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	NPCDR1	Q9BY65	106 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	OSTC	Q9NRP0	149 aa		2.67	□□□□□ -1.98
LRRC28-222	ENST00000561431	WNK1	Q9H4A3	2382 aa		2.66	□□□□□ -1.98
LRRC28-222	ENST00000561431		A0A087WXM4	84 aa		2.66	□□□□□ -1.98

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