RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MBD2Q9UBB5 411 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 UBE2D4Q9Y2X8 147 aa1.92□□□□□ -2.1
HERC1-211ENST00000560983 FABP5P3A8MUU1 101 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 B4DEV8 164 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 UBE2L6O14933 153 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 OR7C2O60412 319 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 CST7O76096 145 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 SFT2D2O95562 160 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 ZNF56Q15929 161 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 TMEM128Q5BJH2 165 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 SPANXN2Q5MJ10 180 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 C9orf129Q5T035 196 aaKnown RBP1.91□□□□□ -2.1
HERC1-211ENST00000560983 ZFP82Q8N141 532 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 CMTM2Q8TAZ6 248 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 IMMP2LQ96T52 175 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 NDFIP1Q9BT67 221 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 MRPL35Q9NZE8 188 aaKnown RBP1.91□□□□□ -2.1
HERC1-211ENST00000560983 RSL24D1Q9UHA3 163 aaKnown RBP1.91□□□□□ -2.1
HERC1-211ENST00000560983 C22orf24Q9Y442 160 aa1.91□□□□□ -2.1
HERC1-211ENST00000560983 UBE2L5PA0A1B0GUS4 154 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 M0R036 132 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 SPINK1P00995 79 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 TCRAP04437 139 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 AKAIN1P0CW23 69 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 TPT1P13693 172 aaKnown RBP1.9□□□□□ -2.11
HERC1-211ENST00000560983 NKX2-5P52952 324 aaPredicted RBP1.9□□□□□ -2.11
HERC1-211ENST00000560983 TMBIM6P55061 237 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 UBE2L3P68036 154 aaKnown RBP1.9□□□□□ -2.11
HERC1-211ENST00000560983 FLI1Q01543 452 aaPredicted RBP1.9□□□□□ -2.11
HERC1-211ENST00000560983 SSBP1Q04837 148 aaKnown RBP1.9□□□□□ -2.11
HERC1-211ENST00000560983 BAXQ07812 192 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 PPP1R1AQ13522 171 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 C11orf52Q96A22 123 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 PGLYRP4Q96LB8 373 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 NPCDR1Q9BY65 106 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 SMDT1Q9H4I9 107 aa1.9□□□□□ -2.11
HERC1-211ENST00000560983 TRAV34A0A0B4J273 112 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 SERTM2A0A1B0GWG4 89 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 ANKRD20A5PA0PJZ0 165 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 G3V3Q6 166 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 H3BMQ9 156 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 S100A11P31949 105 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 FAM74A1Q5RGS3 127 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 SAPCD1Q5SSQ6 148 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 Q6Q795 121 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 UNQ6190/PRO20217Q6UXQ8 127 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 OR10AG1Q8NH19 301 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 GSKIPQ9P0R6 139 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 C6orf48Q9UBA6 75 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 EXTL2Q9UBQ6 330 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 SCP2D1Q9UJQ7 156 aa1.89□□□□□ -2.11
HERC1-211ENST00000560983 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
HERC1-211ENST00000560983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.88□□□□□ -2.11
HERC1-211ENST00000560983 TMSB15BA0A087X1C1 80 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 MUC21A0A140T8X8 626 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 IGKV2-29A2NJV5 120 aaPredicted RBP1.88□□□□□ -2.11
HERC1-211ENST00000560983 FAM25AB3EWG3 89 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 FAM25CB3EWG5 89 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 FAM25GB3EWG6 89 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 COX7A2LO14548 114 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 SH2D1AO60880 128 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 LGALS3P17931 250 aaKnown RBP1.88□□□□□ -2.11
HERC1-211ENST00000560983 NTF3P20783 257 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 CTRLP40313 264 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 AQP4P55087 323 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 LSM3P62310 102 aaKnown RBP1.88□□□□□ -2.11
HERC1-211ENST00000560983 TMEM241Q24JQ0 296 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 LBHQ53QV2 105 aaPredicted RBP1.88□□□□□ -2.11
HERC1-211ENST00000560983 AMMECR1LQ6DCA0 310 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 RNASEKQ6P5S7 137 aaKnown RBP1.88□□□□□ -2.11
HERC1-211ENST00000560983 PP632Q6XCG6 107 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 COX8CQ7Z4L0 72 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 PLEKHB2Q96CS7 222 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 OCR1Q9BZK8 76 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 NDUFA12Q9UI09 145 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 EPDR1Q9UM22 224 aa1.88□□□□□ -2.11
HERC1-211ENST00000560983 IGSF23A1L1A6 192 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 K7EQM0 130 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 SULT1A1P50225 295 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 BCAP31P51572 246 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 SPAG11BQ08648 103 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 COTL1Q14019 142 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 Q1RN00 199 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 IAH1Q2TAA2 248 aaPredicted RBP1.87□□□□□ -2.11
HERC1-211ENST00000560983 C5orf38Q86SI9 138 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 TMEM252Q8N6L7 170 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 C5orf17Q8NAS9 161 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 C15orf40Q8WUR7 153 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 SMIM4Q8WVI0 70 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 AP3S1Q92572 193 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 SLC25A21Q9BQT8 299 aaPredicted RBP1.87□□□□□ -2.11
HERC1-211ENST00000560983 CDC42SE2Q9NRR3 84 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 MCUBQ9NWR8 336 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 BLOC1S6Q9UL45 172 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 ARL2-SNX15V9GYD0 113 aa1.87□□□□□ -2.11
HERC1-211ENST00000560983 C9orf170A2RU37 121 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 C9orf92A6NGG3 77 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 RPL37AP8A6NKH3 93 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 NDUFC2-KCTD14E9PQ53 114 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 F8WDY8 70 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms