RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 C1QTNF4Q9BXJ3 329 aa4.29□□□□□ -1.72
PCAT29-204ENST00000560655 NOP10Q9NPE3 64 aaKnown RBP4.29□□□□□ -1.72
PCAT29-204ENST00000560655 SPANXB1Q9NS25 103 aaPredicted RBP4.29□□□□□ -1.72
PCAT29-204ENST00000560655 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 IGLL5B9A064 214 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 J3QQQ9 107 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 K7EP34 96 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 K7EQD1 137 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 CIDEAO60543 219 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 CRLF1O75462 422 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 COTL1Q14019 142 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 Q6ZUT4 128 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 LINC00612Q8N6U2 182 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 SLC25A29Q8N8R3 303 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 HIST1H4GQ99525 98 aa4.28□□□□□ -1.72
PCAT29-204ENST00000560655 FN1P02751 2386 aaKnown RBP4.28□□□□□ -1.72
PCAT29-204ENST00000560655 NF1P21359 2839 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE12BA1L429 117 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE10A6NGK3 116 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE7O76087 117 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 IGHV3-30P01768 117 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 PF4P02776 101 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE12FP0CL80 117 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE12GP0CL81 117 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE12IP0CL82 117 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 LINC00694P0DN24 101 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 IGHV3-30-5P0DP03 117 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 INSL3P51460 131 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 UBE2D1P51668 147 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 TIRAPP58753 221 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
PCAT29-204ENST00000560655 FHL2Q14192 279 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 RRN3P1Q2M238 152 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 RNASE13Q5GAN3 156 aaKnown RBP4.27□□□□□ -1.73
PCAT29-204ENST00000560655 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 DAZ4Q86SG3 579 aaKnown RBP4.27□□□□□ -1.73
PCAT29-204ENST00000560655 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
PCAT29-204ENST00000560655 CITED1Q99966 193 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 DAZ3Q9NR90 486 aaKnown RBP4.27□□□□□ -1.73
PCAT29-204ENST00000560655 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
PCAT29-204ENST00000560655 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
PCAT29-204ENST00000560655 X6R8D5 127 aa4.27□□□□□ -1.73
PCAT29-204ENST00000560655 SETD2Q9BYW2 2564 aaPredicted RBP4.26□□□□□ -1.73
PCAT29-204ENST00000560655 IGHV1-58A0A0C4DH39 117 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 LOC100131303A0A0U1RQF7 123 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 TRBV6-4A0A1B0GX49 114 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE12JA6NER3 117 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 IGHV3-30-3P0DP02 117 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 LGALS3P17931 250 aaKnown RBP4.26□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE4Q13068 117 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE5Q13069 117 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 GAGE13Q4V321 117 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 C9orf66Q5T8R8 295 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 SCGB1D4Q6XE38 83 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 C10orf126Q8N4M7 172 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.26□□□□□ -1.73
PCAT29-204ENST00000560655 WFDC9Q8NEX5 89 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 KIR2DL5BQ8NHK3 375 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 GTSF1LQ9H1H1 148 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 C2CD3Q4AC94 2353 aa4.26□□□□□ -1.73
PCAT29-204ENST00000560655 HECTD1Q9ULT8 2610 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 CUBNO60494 3623 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 SETXQ7Z333 2677 aaKnown RBP4.25□□□□□ -1.73
PCAT29-204ENST00000560655 IGHV3-64A0A075B6Q5 118 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 TRAV8-3A0A0A6YYJ7 113 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 A0A0J9YXY3 114 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 EIF4EBP3O60516 100 aaPredicted RBP4.25□□□□□ -1.73
PCAT29-204ENST00000560655 FABP2P12104 132 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 COX6A2Q02221 97 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 NOTCH2Q04721 2471 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
PCAT29-204ENST00000560655 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 GTF2H5Q6ZYL4 71 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 VSIG2Q96IQ7 327 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 LITAFQ99732 161 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 NOTCH3Q9UM47 2321 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 SPCS1Q9Y6A9 102 aa4.25□□□□□ -1.73
PCAT29-204ENST00000560655 TRGV2A0A075B6R0 118 aa4.24□□□□□ -1.73
PCAT29-204ENST00000560655 SMIM9A6NGZ8 99 aa4.24□□□□□ -1.73
PCAT29-204ENST00000560655 A8MZ25 164 aa4.24□□□□□ -1.73
PCAT29-204ENST00000560655 CFC1BP0CG36 223 aa4.24□□□□□ -1.73
PCAT29-204ENST00000560655 CFC1P0CG37 223 aa4.24□□□□□ -1.73
PCAT29-204ENST00000560655 CDKN2A-AS1Q9UH64 79 aa4.24□□□□□ -1.73
PCAT29-204ENST00000560655 JMJD1CQ15652 2540 aa4.24□□□□□ -1.73
PCAT29-204ENST00000560655 TRGV4A0A0C4DH28 118 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 H7C423 109 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 SPINK8P0C7L1 97 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 ADAMTSL4-AS1Q5T5F5 129 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 ZFAND6Q6FIF0 208 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 DGAT2L7PQ6IED9 249 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 MUSTN1Q8IVN3 82 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 TMEM101Q96IK0 257 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 TMEM243Q9BU79 118 aa4.23□□□□□ -1.73
PCAT29-204ENST00000560655 GCN1Q92616 2671 aaKnown RBP4.22□□□□□ -1.73
PCAT29-204ENST00000560655 TMEM238LA0A1B0GVL6 79 aa4.22□□□□□ -1.73
PCAT29-204ENST00000560655 A4D1N5 150 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms