RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 IGHV3-64A0A075B6Q5 118 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 C7orf77A4D0Y5 90 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 SMKR1H3BMG3 65 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 SLPIP03973 132 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 FCER1GP30273 86 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 CAMPP49913 170 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 SMAGPQ0VAQ4 97 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
SMAD3-210ENST00000559092 C15orf56Q8N910 161 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 CDC42SE2Q9NRR3 84 aa11.31□□□□□ -0.6
SMAD3-210ENST00000559092 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
SMAD3-210ENST00000559092 LINC00959A0A1B0GUT2 108 aa11.3□□□□□ -0.6
SMAD3-210ENST00000559092 F8W036 122 aa11.3□□□□□ -0.6
SMAD3-210ENST00000559092 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
SMAD3-210ENST00000559092 RAB14P61106 215 aa11.29□□□□□ -0.6
SMAD3-210ENST00000559092 RPL32P62910 135 aaKnown RBP11.29□□□□□ -0.6
SMAD3-210ENST00000559092 FOXI1Q12951 378 aa11.29□□□□□ -0.6
SMAD3-210ENST00000559092 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
SMAD3-210ENST00000559092 TCAPO15273 167 aa11.28□□□□□ -0.6
SMAD3-210ENST00000559092 CKS2P33552 79 aa11.28□□□□□ -0.6
SMAD3-210ENST00000559092 HBBP68871 147 aa11.28□□□□□ -0.6
SMAD3-210ENST00000559092 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
SMAD3-210ENST00000559092 SS18Q15532 418 aa11.28□□□□□ -0.6
SMAD3-210ENST00000559092 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-210ENST00000559092 GVQW2A0A096LPI5 108 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-210ENST00000559092 A0A1B0GXF2 115 aa11.27□□□□□ -0.61
SMAD3-210ENST00000559092 CCL25O15444 150 aa11.27□□□□□ -0.61
SMAD3-210ENST00000559092 KRTAP10-4P60372 401 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-210ENST00000559092 PPBPP02775 128 aa11.26□□□□□ -0.61
SMAD3-210ENST00000559092 XCL1P47992 114 aa11.26□□□□□ -0.61
SMAD3-210ENST00000559092 MRPL54Q6P161 138 aaKnown RBP11.26□□□□□ -0.61
SMAD3-210ENST00000559092 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
SMAD3-210ENST00000559092 ATP5L2Q7Z4Y8 100 aa11.26□□□□□ -0.61
SMAD3-210ENST00000559092 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
SMAD3-210ENST00000559092 PANO1I0J062 215 aa11.25□□□□□ -0.61
SMAD3-210ENST00000559092 PHOX2AO14813 284 aa11.25□□□□□ -0.61
SMAD3-210ENST00000559092 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-210ENST00000559092 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
SMAD3-210ENST00000559092 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
SMAD3-210ENST00000559092 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
SMAD3-210ENST00000559092 C1orf196B1AJZ1 125 aa11.24□□□□□ -0.61
SMAD3-210ENST00000559092 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
SMAD3-210ENST00000559092 HIGD2BQ4VC39 106 aa11.24□□□□□ -0.61
SMAD3-210ENST00000559092 DPH3Q96FX2 82 aa11.24□□□□□ -0.61
SMAD3-210ENST00000559092 KRTAP29-1A8MX34 341 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-210ENST00000559092 D6R8Y8 96 aa11.22□□□□□ -0.61
SMAD3-210ENST00000559092 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
SMAD3-210ENST00000559092 SPACA4Q8TDM5 124 aa11.22□□□□□ -0.61
SMAD3-210ENST00000559092 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
SMAD3-210ENST00000559092 J3QL48 77 aa11.21□□□□□ -0.61
SMAD3-210ENST00000559092 MT-ND4LP03901 98 aa11.21□□□□□ -0.61
SMAD3-210ENST00000559092 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.61
SMAD3-210ENST00000559092 COX6A2Q02221 97 aa11.2□□□□□ -0.62
SMAD3-210ENST00000559092 CLLU1Q5K131 121 aa11.2□□□□□ -0.62
SMAD3-210ENST00000559092 ORMDL3Q8N138 153 aa11.2□□□□□ -0.62
SMAD3-210ENST00000559092 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
SMAD3-210ENST00000559092 A0A087WYN8 130 aa11.19□□□□□ -0.62
SMAD3-210ENST00000559092 TMEM136Q6ZRR5 245 aa11.19□□□□□ -0.62
SMAD3-210ENST00000559092 PLAC8Q9NZF1 115 aa11.19□□□□□ -0.62
SMAD3-210ENST00000559092 ZNF561-AS1K7EIQ3 104 aa11.18□□□□□ -0.62
SMAD3-210ENST00000559092 NPYP01303 97 aa11.18□□□□□ -0.62
SMAD3-210ENST00000559092 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
SMAD3-210ENST00000559092 SPANXA1Q9NS26 97 aa11.18□□□□□ -0.62
SMAD3-210ENST00000559092 TRAV13-1A0A0B4J241 112 aa11.17□□□□□ -0.62
SMAD3-210ENST00000559092 COX7A2LO14548 114 aa11.17□□□□□ -0.62
SMAD3-210ENST00000559092 PRSS3P2Q8NHM4 247 aa11.17□□□□□ -0.62
SMAD3-210ENST00000559092 LINC00474Q9P2X8 69 aa11.17□□□□□ -0.62
SMAD3-210ENST00000559092 LAMTOR2Q9Y2Q5 125 aa11.17□□□□□ -0.62
SMAD3-210ENST00000559092 OXTP01178 125 aa11.16□□□□□ -0.62
SMAD3-210ENST00000559092 RAB5AP20339 215 aa11.16□□□□□ -0.62
SMAD3-210ENST00000559092 MALP21145 153 aa11.16□□□□□ -0.62
SMAD3-210ENST00000559092 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
SMAD3-210ENST00000559092 Q6ZUT4 128 aa11.16□□□□□ -0.62
SMAD3-210ENST00000559092 PRELID3AQ96N28 172 aa11.16□□□□□ -0.62
SMAD3-210ENST00000559092 PRSS47A8MTI9 375 aa11.15□□□□□ -0.62
SMAD3-210ENST00000559092 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
SMAD3-210ENST00000559092 SYCNQ0VAF6 134 aa11.15□□□□□ -0.62
SMAD3-210ENST00000559092 RNASE13Q5GAN3 156 aaKnown RBP11.15□□□□□ -0.62
SMAD3-210ENST00000559092 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
SMAD3-210ENST00000559092 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
SMAD3-210ENST00000559092 UQCC3Q6UW78 93 aa11.14□□□□□ -0.63
SMAD3-210ENST00000559092 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
SMAD3-210ENST00000559092 IGKV2-24A0A0C4DH68 120 aa11.13□□□□□ -0.63
SMAD3-210ENST00000559092 APOMO95445 188 aa11.13□□□□□ -0.63
SMAD3-210ENST00000559092 FAM104AQ969W3 186 aa11.13□□□□□ -0.63
SMAD3-210ENST00000559092 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
SMAD3-210ENST00000559092 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
SMAD3-210ENST00000559092 PYGO1Q9Y3Y4 419 aa11.12□□□□□ -0.63
SMAD3-210ENST00000559092 IGLV4-69A0A075B6H9 119 aa11.11□□□□□ -0.63
SMAD3-210ENST00000559092 STPG4Q8N801 248 aa11.11□□□□□ -0.63
SMAD3-210ENST00000559092 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
SMAD3-210ENST00000559092 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
SMAD3-210ENST00000559092 LRP1Q07954 4544 aaKnown RBP11.1□□□□□ -0.63
SMAD3-210ENST00000559092 A0A096LNI7 61 aa11.1□□□□□ -0.63
SMAD3-210ENST00000559092 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
SMAD3-210ENST00000559092 PKHD1L1Q86WI1 4243 aa11.1□□□□□ -0.63
SMAD3-210ENST00000559092 IGHV3OR16-9A0A0B4J2B5 98 aa11.09□□□□□ -0.63
SMAD3-210ENST00000559092 TMEM218A2RU14 115 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms