RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TRAV26-2A0A0B4J265 109 aa3.69□□□□□ -1.82
ZEB1-211ENST00000558440 OR5AL1P0C617 328 aa3.69□□□□□ -1.82
ZEB1-211ENST00000558440 NKX2-5P52952 324 aaPredicted RBP3.69□□□□□ -1.82
ZEB1-211ENST00000558440 ZNF726P1Q15940 193 aa3.69□□□□□ -1.82
ZEB1-211ENST00000558440 CST9LP1Q5W188 147 aa3.69□□□□□ -1.82
ZEB1-211ENST00000558440 NOTCH2NLQ7Z3S9 236 aa3.69□□□□□ -1.82
ZEB1-211ENST00000558440 ZNF664Q8N3J9 261 aa3.69□□□□□ -1.82
ZEB1-211ENST00000558440 BORCS7-ASMTA0A0B4J1R7 106 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 M0QY20 66 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 S100A9P06702 114 aaKnown RBP3.68□□□□□ -1.82
ZEB1-211ENST00000558440 FHITP49789 147 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 CACNG7P62955 275 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 COTL1Q14019 142 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 AKR1C8PQ5T2L2 129 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 AMMECR1LQ6DCA0 310 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 S100ZQ8WXG8 99 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
ZEB1-211ENST00000558440 PGLYRP4Q96LB8 373 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 CARD19Q96LW7 228 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 MARVELD1Q9BSK0 173 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 PSORS1C2Q9UIG4 136 aa3.68□□□□□ -1.82
ZEB1-211ENST00000558440 MAP1LC3B2A6NCE7 125 aa3.67□□□□□ -1.82
ZEB1-211ENST00000558440 UPK1BO75841 260 aa3.67□□□□□ -1.82
ZEB1-211ENST00000558440 MT-ND6P03923 174 aa3.67□□□□□ -1.82
ZEB1-211ENST00000558440 RPL7L1Q6DKI1 246 aaKnown RBP3.67□□□□□ -1.82
ZEB1-211ENST00000558440 RASL11AQ6T310 242 aa3.67□□□□□ -1.82
ZEB1-211ENST00000558440 INO80EQ8NBZ0 244 aaPredicted RBP3.67□□□□□ -1.82
ZEB1-211ENST00000558440 TPPP3Q9BW30 176 aa3.67□□□□□ -1.82
ZEB1-211ENST00000558440 MAP1LC3BQ9GZQ8 125 aa3.67□□□□□ -1.82
ZEB1-211ENST00000558440 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
ZEB1-211ENST00000558440 PRR4Q16378 134 aa3.66□□□□□ -1.82
ZEB1-211ENST00000558440 RNASEKQ6P5S7 137 aaKnown RBP3.66□□□□□ -1.82
ZEB1-211ENST00000558440 LINC00299Q6ZSB3 139 aa3.66□□□□□ -1.82
ZEB1-211ENST00000558440 BAGE2Q86Y30 109 aa3.66□□□□□ -1.82
ZEB1-211ENST00000558440 NIT2Q9NQR4 276 aa3.66□□□□□ -1.82
ZEB1-211ENST00000558440 NDUFA13Q9P0J0 144 aa3.66□□□□□ -1.82
ZEB1-211ENST00000558440 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 PAGE4O60829 102 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 PFDN1O60925 122 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 TRGC1P0CF51 173 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 XCL1P47992 114 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 DEFA1P59665 94 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 RPS20P60866 119 aaKnown RBP3.65□□□□□ -1.83
ZEB1-211ENST00000558440 SYCNQ0VAF6 134 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 GAGE2BQ13066 116 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 C1orf137Q5JT78 98 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 FER1L6-AS1Q8NA97 138 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 DIRC1Q969H9 104 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 ISOC2Q96AB3 205 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 LINC00526Q96FQ7 95 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 MED28Q9H204 178 aa3.65□□□□□ -1.83
ZEB1-211ENST00000558440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.64□□□□□ -1.83
ZEB1-211ENST00000558440 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
ZEB1-211ENST00000558440 H7C423 109 aa3.64□□□□□ -1.83
ZEB1-211ENST00000558440 APCSP02743 223 aa3.64□□□□□ -1.83
ZEB1-211ENST00000558440 IFITM3Q01628 133 aa3.64□□□□□ -1.83
ZEB1-211ENST00000558440 OR2D3Q8NGH3 330 aa3.64□□□□□ -1.83
ZEB1-211ENST00000558440 TMEM101Q96IK0 257 aa3.64□□□□□ -1.83
ZEB1-211ENST00000558440 BTF3L4Q96K17 158 aa3.64□□□□□ -1.83
ZEB1-211ENST00000558440 IGLV1-50A0A075B6I6 118 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 FXYD6-FXYD2A0A087WZ82 144 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 A0A1B0GV50 99 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 XKRY2A2RUG3 117 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 F2Z2F3 143 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 CCL25O15444 150 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 NCR2O95944 276 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 IGLC6P0CF74 106 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 FGF6P10767 208 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 ZNF25P17030 456 aaPredicted RBP3.63□□□□□ -1.83
ZEB1-211ENST00000558440 NTF3P20783 257 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 CAMPP49913 170 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 ALG5Q9Y673 324 aa3.63□□□□□ -1.83
ZEB1-211ENST00000558440 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 TRAV1-1A0A0B4J248 108 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 LINC00959A0A1B0GUT2 108 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 A0A1W2PNN7 141 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 H0Y9J4 135 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 IFNA1P01562 189 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 IGLV7-43P04211 117 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 BCL2P10415 239 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 RPL35P42766 123 aaKnown RBP3.62□□□□□ -1.83
ZEB1-211ENST00000558440 UBE2D1P51668 147 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 EIF5AP63241 154 aaKnown RBP3.62□□□□□ -1.83
ZEB1-211ENST00000558440 RPL18AQ02543 176 aaKnown RBP3.62□□□□□ -1.83
ZEB1-211ENST00000558440 SS18Q15532 418 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 Q5BKY6 102 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 C9orf116Q5BN46 136 aaPredicted RBP3.62□□□□□ -1.83
ZEB1-211ENST00000558440 EIF5AL1Q6IS14 154 aaKnown RBP3.62□□□□□ -1.83
ZEB1-211ENST00000558440 CD164L2Q6UWJ8 174 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 LYZL1Q6UWQ5 148 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 TMUB2Q71RG4 321 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 PHF5AQ7RTV0 110 aaKnown RBP3.62□□□□□ -1.83
ZEB1-211ENST00000558440 SFT2D1Q8WV19 159 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
ZEB1-211ENST00000558440 A0A087WZ39 114 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 KRTAP16-1A8MUX0 517 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 APOMO95445 188 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 TSHBP01222 138 aa3.61□□□□□ -1.83
ZEB1-211ENST00000558440 GIPP09681 153 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms