RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TRGV11A0A075B6L2 103 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 TMEM238LA0A1B0GVL6 79 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 A6NJY4 79 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 IGLL5B9A064 214 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 C1orf158Q8N1D5 194 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 VPS25Q9BRG1 176 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 PRADC1Q9BSG0 188 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 CELA1Q9UNI1 258 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 C11orf86A6NJI1 115 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 Q6ZTC4 211 aa7.32□□□□□ -1.24
TPM1-212ENST00000558347 NAA38Q9BRA0 125 aaKnown RBP7.32□□□□□ -1.24
TPM1-212ENST00000558347 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 SDHAF1A6NFY7 115 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 TSHBP01222 138 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 CRYGDP07320 174 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 RRN3P1Q2M238 152 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 PIK3CD-AS1Q5SR53 167 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 ZNF479Q96JC4 524 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 LINC01587Q99440 93 aa7.31□□□□□ -1.24
TPM1-212ENST00000558347 DNAH2Q9P225 4427 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 ZNF815PA8K554 130 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 F5H697 171 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 F8W1H4 67 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 K7ERJ3 54 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 M0QY20 66 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 ZNF876PQ49A33 203 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 NFE4Q86UQ8 179 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 PTH2Q96A98 100 aa7.3□□□□□ -1.24
TPM1-212ENST00000558347 IGHV3OR16-12A0A075B7B8 117 aa7.29□□□□□ -1.24
TPM1-212ENST00000558347 A0A087WWL8 130 aa7.29□□□□□ -1.24
TPM1-212ENST00000558347 JPT2Q9H910 190 aa7.29□□□□□ -1.24
TPM1-212ENST00000558347 SPANXB1Q9NS25 103 aaPredicted RBP7.29□□□□□ -1.24
TPM1-212ENST00000558347 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
TPM1-212ENST00000558347 HECTD4Q9Y4D8 3996 aa7.29□□□□□ -1.24
TPM1-212ENST00000558347 TRAV10A0A0B4J240 114 aa7.28□□□□□ -1.24
TPM1-212ENST00000558347 ZNF56Q15929 161 aa7.28□□□□□ -1.24
TPM1-212ENST00000558347 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
TPM1-212ENST00000558347 MDFICQ9P1T7 246 aa7.28□□□□□ -1.24
TPM1-212ENST00000558347 I3L3M4 83 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 UBE2D1P51668 147 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 CRYBA4P53673 196 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 ZNF415Q09FC8 603 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 SCGB1D4Q6XE38 83 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 SMIM9A6NGZ8 99 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 EMP1P54849 157 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 COTL1Q14019 142 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 LYRM7Q5U5X0 104 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 C20orf203Q8NBC4 194 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 TMEM263Q8WUH6 116 aaKnown RBP7.27□□□□□ -1.25
TPM1-212ENST00000558347 SPXQ9BT56 116 aa7.27□□□□□ -1.25
TPM1-212ENST00000558347 DEFB131BA0A096LNP1 70 aa7.26□□□□□ -1.25
TPM1-212ENST00000558347 A0A0J9YY99 117 aa7.26□□□□□ -1.25
TPM1-212ENST00000558347 HTN1P15515 57 aa7.26□□□□□ -1.25
TPM1-212ENST00000558347 AZU1P20160 251 aa7.26□□□□□ -1.25
TPM1-212ENST00000558347 RPL39P62891 51 aaKnown RBP7.26□□□□□ -1.25
TPM1-212ENST00000558347 FAM74A4Q5TZK3 123 aa7.26□□□□□ -1.25
TPM1-212ENST00000558347 C16orf74Q96GX8 76 aa7.26□□□□□ -1.25
TPM1-212ENST00000558347 PYGO1Q9Y3Y4 419 aa7.26□□□□□ -1.25
TPM1-212ENST00000558347 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 A8MWV9 139 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 J3QR89 54 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 LEPROTO15243 131 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 PRM2P04554 102 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 SPART-AS1P0CW21 52 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
TPM1-212ENST00000558347 FAM222AQ5U5X8 452 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 SLC25A29Q8N8R3 303 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 PLEKHB2Q96CS7 222 aa7.25□□□□□ -1.25
TPM1-212ENST00000558347 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
TPM1-212ENST00000558347 M0R2P5 195 aa7.24□□□□□ -1.25
TPM1-212ENST00000558347 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
TPM1-212ENST00000558347 TMEM170BQ5T4T1 132 aa7.24□□□□□ -1.25
TPM1-212ENST00000558347 ZNRF2Q8NHG8 242 aa7.24□□□□□ -1.25
TPM1-212ENST00000558347 PLAC8L1A1L4L8 177 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 J3QQQ9 107 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 P0DMU3 169 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 FAM231AP0DMU4 169 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 FAM231CP0DMU5 169 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 LGALS3P17931 250 aaKnown RBP7.23□□□□□ -1.25
TPM1-212ENST00000558347 DAZ2Q13117 558 aaKnown RBP7.23□□□□□ -1.25
TPM1-212ENST00000558347 GAGE13Q4V321 117 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 AMELXQ99217 191 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 PGPEP1Q9NXJ5 209 aa7.23□□□□□ -1.25
TPM1-212ENST00000558347 IGLV4-3A0A075B6K6 122 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 TEX48A0A1B0GUV7 120 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 RHODO00212 210 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 IGHV3-30P01768 117 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 IGHV3-30-5P0DP03 117 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 RPL24P83731 157 aaKnown RBP7.22□□□□□ -1.25
TPM1-212ENST00000558347 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 VCX2Q9H322 139 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 MRPL16Q9NX20 251 aaKnown RBP7.22□□□□□ -1.25
TPM1-212ENST00000558347 PRO0461Q9UI25 63 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 NACAE9PAV3 2078 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 ZNF22P17026 224 aaPredicted RBP7.22□□□□□ -1.25
TPM1-212ENST00000558347 TSPEAR-AS2P59090 65 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 UBE2D3P61077 147 aa7.22□□□□□ -1.25
TPM1-212ENST00000558347 UBE2D2P62837 147 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms