RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 IGLL5B9A064 214 aa7.52□□□□□ -1.21
TPM1-210ENST00000558264 CRLF1O75462 422 aa7.52□□□□□ -1.21
TPM1-210ENST00000558264 DEFB130BP0DP73 79 aa7.52□□□□□ -1.21
TPM1-210ENST00000558264 DEFB130AP0DP74 79 aa7.52□□□□□ -1.21
TPM1-210ENST00000558264 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
TPM1-210ENST00000558264 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
TPM1-210ENST00000558264 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
TPM1-210ENST00000558264 FLNBO75369 2602 aaKnown RBP7.52□□□□□ -1.21
TPM1-210ENST00000558264 GTF2H5Q6ZYL4 71 aa7.52□□□□□ -1.21
TPM1-210ENST00000558264 LEPROTO15243 131 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 DAZ2Q13117 558 aaKnown RBP7.51□□□□□ -1.21
TPM1-210ENST00000558264 MTURNQ8N3F0 131 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.51□□□□□ -1.21
TPM1-210ENST00000558264 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 C1QTNF4Q9BXJ3 329 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 TRGV4A0A0C4DH28 118 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
TPM1-210ENST00000558264 C4orf48Q5BLP8 95 aa7.51□□□□□ -1.21
TPM1-210ENST00000558264 DEFB4AO15263 64 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 C10orf126Q8N4M7 172 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 FAM110AQ9BQ89 295 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 TRAV13-1A0A0B4J241 112 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 COX6A2Q02221 97 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 RNF151Q2KHN1 245 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 CDKN2A-AS1Q9UH64 79 aa7.5□□□□□ -1.21
TPM1-210ENST00000558264 UBE2D3P61077 147 aa7.49□□□□□ -1.21
TPM1-210ENST00000558264 UBE2D2P62837 147 aa7.49□□□□□ -1.21
TPM1-210ENST00000558264 GEMIN7Q9H840 131 aaKnown RBP7.49□□□□□ -1.21
TPM1-210ENST00000558264 TEP1Q99973 2627 aaKnown RBP7.49□□□□□ -1.21
TPM1-210ENST00000558264 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
TPM1-210ENST00000558264 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
TPM1-210ENST00000558264 NPC2P61916 151 aa7.49□□□□□ -1.21
TPM1-210ENST00000558264 IGKV3OR2-268A0A0C4DH90 116 aa7.48□□□□□ -1.21
TPM1-210ENST00000558264 UBE2D1P51668 147 aa7.48□□□□□ -1.21
TPM1-210ENST00000558264 OR5A1Q8NGJ0 315 aa7.48□□□□□ -1.21
TPM1-210ENST00000558264 F8P00451 2351 aa7.48□□□□□ -1.21
TPM1-210ENST00000558264 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
TPM1-210ENST00000558264 TINCRA0A1B0GVN0 87 aa7.47□□□□□ -1.21
TPM1-210ENST00000558264 H3BMG7 143 aa7.47□□□□□ -1.21
TPM1-210ENST00000558264 A0A0J9YXY3 114 aa7.47□□□□□ -1.21
TPM1-210ENST00000558264 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
TPM1-210ENST00000558264 DEFB135Q30KP9 77 aa7.47□□□□□ -1.21
TPM1-210ENST00000558264 DAZ4Q86SG3 579 aaKnown RBP7.47□□□□□ -1.21
TPM1-210ENST00000558264 DAZ3Q9NR90 486 aaKnown RBP7.47□□□□□ -1.21
TPM1-210ENST00000558264 IGHV1-58A0A0C4DH39 117 aa7.46□□□□□ -1.21
TPM1-210ENST00000558264 A6NJY4 79 aa7.46□□□□□ -1.21
TPM1-210ENST00000558264 FHL2Q14192 279 aa7.46□□□□□ -1.21
TPM1-210ENST00000558264 OVOL2Q9BRP0 275 aa7.46□□□□□ -1.21
TPM1-210ENST00000558264 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.21
TPM1-210ENST00000558264 A0A096LPF7 62 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 LOC107984156A0A0G2JMH3 177 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 A4D1N5 150 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 H7C2G1 150 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 TSPAN13O95857 204 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 CFC1BP0CG36 223 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 CFC1P0CG37 223 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 GAGE6Q13070 117 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 OCIAD2Q56VL3 154 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 ARL17AQ8IVW1 177 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 DAND5Q8N907 189 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 VSIG2Q96IQ7 327 aa7.46□□□□□ -1.22
TPM1-210ENST00000558264 UBE2L6O14933 153 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 PRSS2P07478 247 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 C9orf66Q5T8R8 295 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 ZNF625Q96I27 306 aaPredicted RBP7.45□□□□□ -1.22
TPM1-210ENST00000558264 SPANXB1Q9NS25 103 aaPredicted RBP7.45□□□□□ -1.22
TPM1-210ENST00000558264 X6R8D5 127 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 A0A0U1RRA0 63 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
TPM1-210ENST00000558264 CRYBA4P53673 196 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 ADAMTSL4-AS1Q5T5F5 129 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 SBSPONQ8IVN8 264 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 TMEM243Q9BU79 118 aa7.45□□□□□ -1.22
TPM1-210ENST00000558264 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
TPM1-210ENST00000558264 RBX1P62877 108 aa7.44□□□□□ -1.22
TPM1-210ENST00000558264 TMEM101Q96IK0 257 aa7.44□□□□□ -1.22
TPM1-210ENST00000558264 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
TPM1-210ENST00000558264 FAM222AQ5U5X8 452 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 LITAFQ99732 161 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 CITED1Q99966 193 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 CHCHD5Q9BSY4 110 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 IGLV4-60A0A075B6I1 120 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
TPM1-210ENST00000558264 WFDC2Q14508 124 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 CFAP161Q6P656 301 aa7.43□□□□□ -1.22
TPM1-210ENST00000558264 GYPEP15421 78 aa7.42□□□□□ -1.22
TPM1-210ENST00000558264 CIDEAO60543 219 aa7.42□□□□□ -1.22
TPM1-210ENST00000558264 PSMB2P49721 201 aa7.42□□□□□ -1.22
TPM1-210ENST00000558264 INSL3P51460 131 aa7.42□□□□□ -1.22
TPM1-210ENST00000558264 HERVK_113P63121 156 aa7.41□□□□□ -1.22
TPM1-210ENST00000558264 TRBV6-8A0A0A6YYG3 113 aa7.41□□□□□ -1.22
TPM1-210ENST00000558264 TIRAPP58753 221 aa7.41□□□□□ -1.22
TPM1-210ENST00000558264 ZFAND6Q6FIF0 208 aa7.41□□□□□ -1.22
TPM1-210ENST00000558264 SH2D6Q7Z4S9 175 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms