RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 D6R8Y8 96 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 PHOX2AO14813 284 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 TCAPO15273 167 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 HLA-DQA1P01909 254 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 FGF6P10767 208 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 LINC00310P59036 64 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
SLIRP-211ENST00000557623 SMAGPQ0VAQ4 97 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
SLIRP-211ENST00000557623 DYNC1H1Q14204 4646 aaKnown RBP8.24□□□□□ -1.09
SLIRP-211ENST00000557623 TNFRSF6BO95407 300 aa8.23□□□□□ -1.09
SLIRP-211ENST00000557623 KRTAP19-4Q3LI73 84 aa8.23□□□□□ -1.09
SLIRP-211ENST00000557623 ORMDL3Q8N138 153 aa8.23□□□□□ -1.09
SLIRP-211ENST00000557623 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-211ENST00000557623 TRAV9-1A0A075B6T8 112 aa8.22□□□□□ -1.09
SLIRP-211ENST00000557623 TMEM136Q6ZRR5 245 aa8.22□□□□□ -1.09
SLIRP-211ENST00000557623 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
SLIRP-211ENST00000557623 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 S100PP25815 95 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 C10orf91Q5T1B1 145 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 KRTAP26-1Q6PEX3 210 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 MRPL52Q86TS9 123 aaKnown RBP8.21□□□□□ -1.1
SLIRP-211ENST00000557623 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 SMIM2Q9BVW6 85 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.1
SLIRP-211ENST00000557623 CARHSP1Q9Y2V2 147 aaKnown RBP8.21□□□□□ -1.1
SLIRP-211ENST00000557623 USP17L23D6RBM5 183 aa8.2□□□□□ -1.1
SLIRP-211ENST00000557623 NPYP01303 97 aa8.2□□□□□ -1.1
SLIRP-211ENST00000557623 DGAT2L7PQ6IED9 249 aa8.2□□□□□ -1.1
SLIRP-211ENST00000557623 PRELID3AQ96N28 172 aa8.2□□□□□ -1.1
SLIRP-211ENST00000557623 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
SLIRP-211ENST00000557623 RHEBQ15382 184 aa8.19□□□□□ -1.1
SLIRP-211ENST00000557623 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
SLIRP-211ENST00000557623 CSDC2Q9Y534 153 aaKnown RBP8.19□□□□□ -1.1
SLIRP-211ENST00000557623 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
SLIRP-211ENST00000557623 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
SLIRP-211ENST00000557623 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 RAB5AP20339 215 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-211ENST00000557623 TIMM21Q9BVV7 248 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 MAP1LC3AQ9H492 121 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 LRP1BQ9NZR2 4599 aa8.17□□□□□ -1.1
SLIRP-211ENST00000557623 LINC00959A0A1B0GUT2 108 aa8.16□□□□□ -1.1
SLIRP-211ENST00000557623 GAGE12HA6NDE8 117 aa8.16□□□□□ -1.1
SLIRP-211ENST00000557623 SS18Q15532 418 aa8.16□□□□□ -1.1
SLIRP-211ENST00000557623 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
SLIRP-211ENST00000557623 COX19Q49B96 90 aa8.16□□□□□ -1.1
SLIRP-211ENST00000557623 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
SLIRP-211ENST00000557623 CCL25O15444 150 aa8.15□□□□□ -1.1
SLIRP-211ENST00000557623 PRSS1P07477 247 aa8.15□□□□□ -1.1
SLIRP-211ENST00000557623 LOC389332A0A1B0GUA5 103 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 hDV102S1A0JD36 115 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 SNAPINO95295 136 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 APOC3P02656 99 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 XGP55808 180 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 Q8N8P6 123 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 GNB1LQ9BYB4 327 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 SPANXA1Q9NS26 97 aa8.14□□□□□ -1.11
SLIRP-211ENST00000557623 K7EMI3 77 aa8.13□□□□□ -1.11
SLIRP-211ENST00000557623 XCL1P47992 114 aa8.13□□□□□ -1.11
SLIRP-211ENST00000557623 Q8N1X5 172 aa8.13□□□□□ -1.11
SLIRP-211ENST00000557623 SVBPQ8N300 66 aa8.13□□□□□ -1.11
SLIRP-211ENST00000557623 HERC2O95714 4834 aa8.12□□□□□ -1.11
SLIRP-211ENST00000557623 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
SLIRP-211ENST00000557623 MT-ND6P03923 174 aa8.12□□□□□ -1.11
SLIRP-211ENST00000557623 RPL39P62891 51 aaKnown RBP8.12□□□□□ -1.11
SLIRP-211ENST00000557623 MRPS36P82909 103 aaKnown RBP8.12□□□□□ -1.11
SLIRP-211ENST00000557623 FOXI1Q12951 378 aa8.12□□□□□ -1.11
SLIRP-211ENST00000557623 ORMDL2Q53FV1 153 aa8.12□□□□□ -1.11
SLIRP-211ENST00000557623 CD164L2Q6UWJ8 174 aa8.12□□□□□ -1.11
SLIRP-211ENST00000557623 NXT2Q9NPJ8 142 aaKnown RBP8.12□□□□□ -1.11
SLIRP-211ENST00000557623 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.11□□□□□ -1.11
SLIRP-211ENST00000557623 G0S2P27469 103 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 IFI27P40305 119 aaPredicted RBP8.11□□□□□ -1.11
SLIRP-211ENST00000557623 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
SLIRP-211ENST00000557623 KIAA1644Q3SXP7 199 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 Q6ZSA8 131 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 Q6ZUT4 128 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 C15orf56Q8N910 161 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 FAM30AQ9NZY2 134 aa8.11□□□□□ -1.11
SLIRP-211ENST00000557623 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
SLIRP-211ENST00000557623 RNASE13Q5GAN3 156 aaKnown RBP8.1□□□□□ -1.11
SLIRP-211ENST00000557623 PYGO1Q9Y3Y4 419 aa8.1□□□□□ -1.11
SLIRP-211ENST00000557623 RYR1P21817 5038 aa8.09□□□□□ -1.11
SLIRP-211ENST00000557623 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
SLIRP-211ENST00000557623 KRTAP9-9Q9BYP9 154 aa8.09□□□□□ -1.11
SLIRP-211ENST00000557623 KRTAP9-4Q9BYQ2 154 aa8.09□□□□□ -1.11
SLIRP-211ENST00000557623 CYSLTR1Q9Y271 337 aa8.09□□□□□ -1.11
SLIRP-211ENST00000557623 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.11
SLIRP-211ENST00000557623 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
SLIRP-211ENST00000557623 COX7A2LO14548 114 aa8.08□□□□□ -1.12
SLIRP-211ENST00000557623 FABP9Q0Z7S8 132 aa8.08□□□□□ -1.12
SLIRP-211ENST00000557623 HIGD2BQ4VC39 106 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms