RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 UQCC1Q9NVA1 299 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 TMEM14CQ9P0S9 112 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 LSM5Q9Y4Y9 91 aaKnown RBP2.02□□□□□ -2.09
CHD8-212ENST00000557329 IGHV1-24A0A0C4DH33 117 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 LOC107984640A0A0U1RRK4 108 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 DUXBA0A1W2PPF3 345 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 FAM25EA8MYX2 175 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 B4DEV8 164 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 K7EPK0 472 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 ARMS2P0C7Q2 107 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 SLC25A6P12236 298 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 RNASE3P12724 160 aaKnown RBP2.01□□□□□ -2.09
CHD8-212ENST00000557329 TPT1P13693 172 aaKnown RBP2.01□□□□□ -2.09
CHD8-212ENST00000557329 XCL1P47992 114 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 ZNF80P51504 273 aaPredicted RBP2.01□□□□□ -2.09
CHD8-212ENST00000557329 SYCNQ0VAF6 134 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 IL18Q14116 193 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 SMUG1Q53HV7 270 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 TMEM97Q5BJF2 176 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 FAM162BQ5T6X4 162 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 AMMECR1LQ6DCA0 310 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 RNASEKQ6P5S7 137 aaKnown RBP2.01□□□□□ -2.09
CHD8-212ENST00000557329 FAM19A5Q7Z5A7 132 aaPredicted RBP2.01□□□□□ -2.09
CHD8-212ENST00000557329 MCFD2Q8NI22 146 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 AQP10Q96PS8 301 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 LYRM2Q9NU23 88 aaPredicted RBP2.01□□□□□ -2.09
CHD8-212ENST00000557329 OR5AC2Q9NZP5 309 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 LENEPQ9Y5L5 61 aa2.01□□□□□ -2.09
CHD8-212ENST00000557329 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
CHD8-212ENST00000557329 TRBV10-1A0A0K0K1A3 114 aa2□□□□□ -2.09
CHD8-212ENST00000557329 TRBV6-1A0A0K0K1D8 114 aa2□□□□□ -2.09
CHD8-212ENST00000557329 MUC21A0A140T8X8 626 aa2□□□□□ -2.09
CHD8-212ENST00000557329 FNDC10F2Z333 226 aa2□□□□□ -2.09
CHD8-212ENST00000557329 K7EQM0 130 aa2□□□□□ -2.09
CHD8-212ENST00000557329 SFT2D2O95562 160 aa2□□□□□ -2.09
CHD8-212ENST00000557329 SMIM17P0DL12 118 aa2□□□□□ -2.09
CHD8-212ENST00000557329 FGF6P10767 208 aa2□□□□□ -2.09
CHD8-212ENST00000557329 TPRXLQ17RH7 258 aa2□□□□□ -2.09
CHD8-212ENST00000557329 IAH1Q2TAA2 248 aaPredicted RBP2□□□□□ -2.09
CHD8-212ENST00000557329 TMEM128Q5BJH2 165 aa2□□□□□ -2.09
CHD8-212ENST00000557329 TMEM14EPQ6UXP3 125 aa2□□□□□ -2.09
CHD8-212ENST00000557329 COX6B2Q6YFQ2 88 aa2□□□□□ -2.09
CHD8-212ENST00000557329 NTM-AS1Q6ZSK4 140 aa2□□□□□ -2.09
CHD8-212ENST00000557329 LINC00304Q8N9R0 145 aa2□□□□□ -2.09
CHD8-212ENST00000557329 TSKUQ8WUA8 353 aa2□□□□□ -2.09
CHD8-212ENST00000557329 C15orf40Q8WUR7 153 aa2□□□□□ -2.09
CHD8-212ENST00000557329 MITD1Q8WV92 249 aa2□□□□□ -2.09
CHD8-212ENST00000557329 ISOC2Q96AB3 205 aa2□□□□□ -2.09
CHD8-212ENST00000557329 FXYD5Q96DB9 178 aa2□□□□□ -2.09
CHD8-212ENST00000557329 TVP23CQ96ET8 276 aa2□□□□□ -2.09
CHD8-212ENST00000557329 CAMK2N2Q96S95 79 aa2□□□□□ -2.09
CHD8-212ENST00000557329 TMEM243Q9BU79 118 aa2□□□□□ -2.09
CHD8-212ENST00000557329 GGACTQ9BVM4 153 aa2□□□□□ -2.09
CHD8-212ENST00000557329 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
CHD8-212ENST00000557329 MIXL1Q9H2W2 232 aa2□□□□□ -2.09
CHD8-212ENST00000557329 RPP21Q9H633 154 aaKnown RBP2□□□□□ -2.09
CHD8-212ENST00000557329 CARHSP1Q9Y2V2 147 aaKnown RBP2□□□□□ -2.09
CHD8-212ENST00000557329 UBE2D4Q9Y2X8 147 aa2□□□□□ -2.09
CHD8-212ENST00000557329 TRAV6A0A075B6T7 132 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 IGKV2D-26A0A0A0MRZ7 120 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 C7orf66A4D0T2 115 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 FABP5P3A8MUU1 101 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
CHD8-212ENST00000557329 MGPP08493 103 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 RAB4BP61018 213 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 VBP1P61758 197 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 MT1HP80294 61 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 PPP1R1AQ13522 171 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 MOBPQ13875 183 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 SS18Q15532 418 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 AP3S1Q92572 193 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 SFRP2Q96HF1 295 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 OTORQ9NRC9 128 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 PSG8Q9UQ74 426 aa1.99□□□□□ -2.09
CHD8-212ENST00000557329 GVQW2A0A096LPI5 108 aaPredicted RBP1.98□□□□□ -2.09
CHD8-212ENST00000557329 IGHV1-58A0A0C4DH39 117 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 A0A1B0GVG6 124 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 A0A1W2PPV4 95 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 APOMO95445 188 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 PVALBP20472 110 aaPredicted RBP1.98□□□□□ -2.09
CHD8-212ENST00000557329 RPL12P30050 165 aaKnown RBP1.98□□□□□ -2.09
CHD8-212ENST00000557329 S100A11P31949 105 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 FAUP35544 74 aaKnown RBP1.98□□□□□ -2.09
CHD8-212ENST00000557329 NKX2-5P52952 324 aaPredicted RBP1.98□□□□□ -2.09
CHD8-212ENST00000557329 TAS2R45P59539 299 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 NCS1P62166 190 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 HBG1P69891 147 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 HBG2P69892 147 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 ASB16-AS1Q495Z4 193 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 SPANXN1Q5VSR9 72 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 SLC25A34Q6PIV7 304 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 Q6Q795 121 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 STX12Q86Y82 276 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 ZFP82Q8N141 532 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 OR5A1Q8NGJ0 315 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 PTH2Q96A98 100 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 FAM167A-AS1Q96KT0 104 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 NPCDR1Q9BY65 106 aa1.98□□□□□ -2.09
CHD8-212ENST00000557329 IL36BQ9NZH7 164 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms