RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 LYZL1Q6UWQ5 148 aa5.41□□□□□ -1.54
VRK1-206ENST00000557222 STPG4Q8N801 248 aa5.41□□□□□ -1.54
VRK1-206ENST00000557222 A0A1B0GV50 99 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 KANTRA0A1W2PQU2 76 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 TEX46H3BTG2 121 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 BCL2L11O43521 198 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 PDE6DO43924 150 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 ZNF25P17030 456 aaPredicted RBP5.4□□□□□ -1.54
VRK1-206ENST00000557222 CTRLP40313 264 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 GNG4P50150 75 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 SRSF9Q13242 221 aaKnown RBP eCLIP5.4□□□□□ -1.54
VRK1-206ENST00000557222 AMMECR1LQ6DCA0 310 aa5.4□□□□□ -1.54
VRK1-206ENST00000557222 CHCHD10Q8WYQ3 142 aaPredicted RBP5.4□□□□□ -1.54
VRK1-206ENST00000557222 IGKV2-24A0A0C4DH68 120 aa5.39□□□□□ -1.55
VRK1-206ENST00000557222 HIGD2BQ4VC39 106 aa5.39□□□□□ -1.55
VRK1-206ENST00000557222 Q6ZRP5 223 aa5.39□□□□□ -1.55
VRK1-206ENST00000557222 GATD1Q8NB37 220 aa5.39□□□□□ -1.55
VRK1-206ENST00000557222 GNG13Q9P2W3 67 aa5.39□□□□□ -1.55
VRK1-206ENST00000557222 A0A096LNI7 61 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 RAB19A4D1S5 217 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 FGF6P10767 208 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 MEF2BQ02080 365 aaPredicted RBP5.38□□□□□ -1.55
VRK1-206ENST00000557222 TWIST1Q15672 202 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 RGS21Q2M5E4 152 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 EIF5AL1Q6IS14 154 aaKnown RBP5.38□□□□□ -1.55
VRK1-206ENST00000557222 SMIM15Q7Z3B0 74 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 OR5A1Q8NGJ0 315 aa5.38□□□□□ -1.55
VRK1-206ENST00000557222 IGKV3OR2-268A0A0C4DH90 116 aa5.37□□□□□ -1.55
VRK1-206ENST00000557222 SMLR1H3BR10 107 aa5.37□□□□□ -1.55
VRK1-206ENST00000557222 APCSP02743 223 aa5.37□□□□□ -1.55
VRK1-206ENST00000557222 TAGLN2P37802 199 aaKnown RBP5.37□□□□□ -1.55
VRK1-206ENST00000557222 RNASEKQ6P5S7 137 aaKnown RBP5.37□□□□□ -1.55
VRK1-206ENST00000557222 LYPD6BQ8NI32 183 aa5.37□□□□□ -1.55
VRK1-206ENST00000557222 TMEM101Q96IK0 257 aa5.37□□□□□ -1.55
VRK1-206ENST00000557222 BTF3L4Q96K17 158 aa5.37□□□□□ -1.55
VRK1-206ENST00000557222 MED9Q9NWA0 146 aa5.37□□□□□ -1.55
VRK1-206ENST00000557222 TRBV20OR9-2A0A075B6H5 130 aa5.36□□□□□ -1.55
VRK1-206ENST00000557222 TRBV6-5A0A0K0K1A5 114 aa5.36□□□□□ -1.55
VRK1-206ENST00000557222 LINC00959A0A1B0GUT2 108 aa5.36□□□□□ -1.55
VRK1-206ENST00000557222 SDHAF1A6NFY7 115 aa5.36□□□□□ -1.55
VRK1-206ENST00000557222 I3L3M4 83 aa5.36□□□□□ -1.55
VRK1-206ENST00000557222 CCL25O15444 150 aa5.36□□□□□ -1.55
VRK1-206ENST00000557222 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
VRK1-206ENST00000557222 RPP21Q9H633 154 aaKnown RBP5.36□□□□□ -1.55
VRK1-206ENST00000557222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.35□□□□□ -1.55
VRK1-206ENST00000557222 TRAV26-2A0A0B4J265 109 aa5.35□□□□□ -1.55
VRK1-206ENST00000557222 IGKV2-29A2NJV5 120 aaPredicted RBP5.35□□□□□ -1.55
VRK1-206ENST00000557222 FAM231BA6NCW3 169 aa5.35□□□□□ -1.55
VRK1-206ENST00000557222 ESDP10768 282 aa5.35□□□□□ -1.55
VRK1-206ENST00000557222 PMCHP20382 165 aa5.35□□□□□ -1.55
VRK1-206ENST00000557222 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
VRK1-206ENST00000557222 CD164L2Q6UWJ8 174 aa5.35□□□□□ -1.55
VRK1-206ENST00000557222 MRPL52Q86TS9 123 aaKnown RBP5.35□□□□□ -1.55
VRK1-206ENST00000557222 ISOC2Q96AB3 205 aa5.35□□□□□ -1.55
VRK1-206ENST00000557222 LOC107984640A0A0U1RRK4 108 aa5.34□□□□□ -1.55
VRK1-206ENST00000557222 BCL2P10415 239 aa5.34□□□□□ -1.55
VRK1-206ENST00000557222 XCL1P47992 114 aa5.34□□□□□ -1.55
VRK1-206ENST00000557222 FOXA3P55318 350 aaPredicted RBP5.34□□□□□ -1.55
VRK1-206ENST00000557222 SS18Q15532 418 aa5.34□□□□□ -1.55
VRK1-206ENST00000557222 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
VRK1-206ENST00000557222 RPL39LQ96EH5 51 aaKnown RBP5.34□□□□□ -1.55
VRK1-206ENST00000557222 CDC42SE2Q9NRR3 84 aa5.34□□□□□ -1.55
VRK1-206ENST00000557222 CAMPP49913 170 aa5.33□□□□□ -1.56
VRK1-206ENST00000557222 SMAGPQ0VAQ4 97 aa5.33□□□□□ -1.56
VRK1-206ENST00000557222 OCC1Q8TAD7 63 aa5.33□□□□□ -1.56
VRK1-206ENST00000557222 MRAP2Q96G30 205 aa5.33□□□□□ -1.56
VRK1-206ENST00000557222 CSDC2Q9Y534 153 aaKnown RBP5.33□□□□□ -1.56
VRK1-206ENST00000557222 IGLV4-69A0A075B6H9 119 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 TRBV27A0A0K0K1C4 114 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 A8MWL6 223 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 C1orf196B1AJZ1 125 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 K7EN84 100 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 TSHBP01222 138 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 POLR2KP53803 58 aaKnown RBP5.32□□□□□ -1.56
VRK1-206ENST00000557222 FAM231DQ6ZW35 169 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 ZNF664Q8N3J9 261 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 C2orf48Q96LS8 159 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 RNASE7Q9H1E1 156 aaKnown RBP5.32□□□□□ -1.56
VRK1-206ENST00000557222 ST20Q9HBF5 79 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 LPAP08519 4548 aa5.32□□□□□ -1.56
VRK1-206ENST00000557222 NPSP0C0P6 89 aa5.31□□□□□ -1.56
VRK1-206ENST00000557222 NUP35Q8NFH5 326 aa5.31□□□□□ -1.56
VRK1-206ENST00000557222 TMEM191AQ9H0A3 160 aa5.31□□□□□ -1.56
VRK1-206ENST00000557222 PSORS1C2Q9UIG4 136 aa5.31□□□□□ -1.56
VRK1-206ENST00000557222 C7orf77A4D0Y5 90 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 F8WDY8 70 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 TMEM250H0YL14 139 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 COX7A2LO14548 114 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 GATCO43716 136 aaKnown RBP5.3□□□□□ -1.56
VRK1-206ENST00000557222 GAS8-AS1O95177 125 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 APOMO95445 188 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 PPP1R17O96001 155 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 GAGE2BQ13066 116 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 SLC51BQ86UW2 128 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 TSKUQ8WUA8 353 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 BORCS7Q96B45 105 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 LINC00526Q96FQ7 95 aa5.3□□□□□ -1.56
VRK1-206ENST00000557222 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms