RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 C10orf126Q8N4M7 172 aa11.72□□□□□ -0.53
TUBB3-211ENST00000556536 CYSLTR1Q9Y271 337 aa11.72□□□□□ -0.53
TUBB3-211ENST00000556536 A0A096LNJ9 63 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 SERF1AO75920 110 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 LINC00269Q8N2A0 174 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 FAM104AQ969W3 186 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 TOMM6Q96B49 74 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
TUBB3-211ENST00000556536 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 OPRPNQ99935 248 aaPredicted RBP11.71□□□□□ -0.53
TUBB3-211ENST00000556536 TIMM21Q9BVV7 248 aa11.71□□□□□ -0.53
TUBB3-211ENST00000556536 NUPR1O60356 82 aa11.7□□□□□ -0.54
TUBB3-211ENST00000556536 ENHOQ6UWT2 76 aa11.7□□□□□ -0.54
TUBB3-211ENST00000556536 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
TUBB3-211ENST00000556536 SPANXA1Q9NS26 97 aa11.7□□□□□ -0.54
TUBB3-211ENST00000556536 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
TUBB3-211ENST00000556536 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
TUBB3-211ENST00000556536 DGAT2L7PQ6IED9 249 aa11.69□□□□□ -0.54
TUBB3-211ENST00000556536 Q6ZUT4 128 aa11.69□□□□□ -0.54
TUBB3-211ENST00000556536 ZNF664Q8N3J9 261 aa11.69□□□□□ -0.54
TUBB3-211ENST00000556536 UBE2WQ96B02 151 aa11.69□□□□□ -0.54
TUBB3-211ENST00000556536 Q9HAA7 133 aa11.69□□□□□ -0.54
TUBB3-211ENST00000556536 DNAH10Q8IVF4 4471 aa11.68□□□□□ -0.54
TUBB3-211ENST00000556536 IGIPA6NJ69 53 aa11.68□□□□□ -0.54
TUBB3-211ENST00000556536 G0S2P27469 103 aa11.68□□□□□ -0.54
TUBB3-211ENST00000556536 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
TUBB3-211ENST00000556536 PRR34Q9NV39 138 aa11.68□□□□□ -0.54
TUBB3-211ENST00000556536 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
TUBB3-211ENST00000556536 IGLV4-3A0A075B6K6 122 aa11.67□□□□□ -0.54
TUBB3-211ENST00000556536 HBDP02042 147 aa11.67□□□□□ -0.54
TUBB3-211ENST00000556536 REG3AQ06141 175 aa11.67□□□□□ -0.54
TUBB3-211ENST00000556536 FAM19A2Q8N3H0 131 aa11.67□□□□□ -0.54
TUBB3-211ENST00000556536 KIAA1109Q2LD37 5005 aa11.67□□□□□ -0.54
TUBB3-211ENST00000556536 HECTD4Q9Y4D8 3996 aa11.66□□□□□ -0.54
TUBB3-211ENST00000556536 IGKV3OR2-268A0A0C4DH90 116 aa11.66□□□□□ -0.54
TUBB3-211ENST00000556536 HSBP1O75506 76 aa11.66□□□□□ -0.54
TUBB3-211ENST00000556536 CRPP02741 224 aa11.66□□□□□ -0.54
TUBB3-211ENST00000556536 MRPS36P82909 103 aaKnown RBP11.66□□□□□ -0.54
TUBB3-211ENST00000556536 C6orf223Q8N319 242 aa11.66□□□□□ -0.54
TUBB3-211ENST00000556536 SCGB3A1Q96QR1 104 aa11.66□□□□□ -0.54
TUBB3-211ENST00000556536 DNAH17Q9UFH2 4485 aa11.65□□□□□ -0.54
TUBB3-211ENST00000556536 NDUFA6P56556 154 aa11.65□□□□□ -0.54
TUBB3-211ENST00000556536 PDZD11Q5EBL8 140 aa11.65□□□□□ -0.54
TUBB3-211ENST00000556536 TRAV8-3A0A0A6YYJ7 113 aa11.64□□□□□ -0.55
TUBB3-211ENST00000556536 C1orf134Q5TEV5 83 aa11.64□□□□□ -0.55
TUBB3-211ENST00000556536 ZC2HC1BQ5TFG8 222 aa11.64□□□□□ -0.55
TUBB3-211ENST00000556536 ERASQ7Z444 233 aa11.64□□□□□ -0.55
TUBB3-211ENST00000556536 TIMM17AQ99595 171 aa11.64□□□□□ -0.55
TUBB3-211ENST00000556536 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
TUBB3-211ENST00000556536 TMEM141Q96I45 108 aa11.63□□□□□ -0.55
TUBB3-211ENST00000556536 IGLV10-54A0A075B6I4 117 aa11.62□□□□□ -0.55
TUBB3-211ENST00000556536 LINC01549A6NIU2 74 aa11.62□□□□□ -0.55
TUBB3-211ENST00000556536 MIAQ16674 131 aa11.62□□□□□ -0.55
TUBB3-211ENST00000556536 Q6ZRN7 208 aaPredicted RBP11.62□□□□□ -0.55
TUBB3-211ENST00000556536 IGKV2D-24A0A075B6R9 120 aa11.61□□□□□ -0.55
TUBB3-211ENST00000556536 LINC00959A0A1B0GUT2 108 aa11.61□□□□□ -0.55
TUBB3-211ENST00000556536 NPSP0C0P6 89 aa11.61□□□□□ -0.55
TUBB3-211ENST00000556536 LINC00173Q6ZV60 143 aa11.61□□□□□ -0.55
TUBB3-211ENST00000556536 NFE4Q86UQ8 179 aa11.61□□□□□ -0.55
TUBB3-211ENST00000556536 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
TUBB3-211ENST00000556536 RTL8CO15255 209 aa11.6□□□□□ -0.55
TUBB3-211ENST00000556536 AMELXQ99217 191 aa11.6□□□□□ -0.55
TUBB3-211ENST00000556536 FAT2Q9NYQ8 4349 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 IFITM10A6NMD0 228 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-211ENST00000556536 KRTAP26-1Q6PEX3 210 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 Q6ZN92 141 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 TEX43Q6ZNM6 134 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 C1orf43Q9BWL3 253 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 VCX2Q9H322 139 aa11.59□□□□□ -0.55
TUBB3-211ENST00000556536 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
TUBB3-211ENST00000556536 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-211ENST00000556536 RMI2Q96E14 147 aa11.58□□□□□ -0.56
TUBB3-211ENST00000556536 CCL25O15444 150 aa11.57□□□□□ -0.56
TUBB3-211ENST00000556536 ATP5LO75964 103 aa11.57□□□□□ -0.56
TUBB3-211ENST00000556536 FABP4P15090 132 aa11.57□□□□□ -0.56
TUBB3-211ENST00000556536 PAPPA-AS1Q5QFB9 102 aa11.57□□□□□ -0.56
TUBB3-211ENST00000556536 MAPKAPK5-AS1Q8N8E1 139 aa11.57□□□□□ -0.56
TUBB3-211ENST00000556536 TM2D2Q9BX73 214 aa11.57□□□□□ -0.56
TUBB3-211ENST00000556536 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
TUBB3-211ENST00000556536 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
TUBB3-211ENST00000556536 LEPROTL1O95214 131 aa11.56□□□□□ -0.56
TUBB3-211ENST00000556536 XCL1P47992 114 aa11.56□□□□□ -0.56
TUBB3-211ENST00000556536 SS18Q15532 418 aa11.56□□□□□ -0.56
TUBB3-211ENST00000556536 C2orf88Q9BSF0 95 aa11.56□□□□□ -0.56
TUBB3-211ENST00000556536 CST9LQ9H4G1 147 aa11.56□□□□□ -0.56
TUBB3-211ENST00000556536 UBE2D1P51668 147 aa11.55□□□□□ -0.56
TUBB3-211ENST00000556536 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
TUBB3-211ENST00000556536 COX11Q9Y6N1 276 aa11.55□□□□□ -0.56
TUBB3-211ENST00000556536 PSCAO43653 123 aa11.54□□□□□ -0.56
TUBB3-211ENST00000556536 FOXI1Q12951 378 aa11.54□□□□□ -0.56
TUBB3-211ENST00000556536 PMVKQ15126 192 aa11.54□□□□□ -0.56
TUBB3-211ENST00000556536 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
TUBB3-211ENST00000556536 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
TUBB3-211ENST00000556536 DNAH11Q96DT5 4516 aa11.52□□□□□ -0.56
TUBB3-211ENST00000556536 S100A6P06703 90 aa11.52□□□□□ -0.57
TUBB3-211ENST00000556536 PRSS1P07477 247 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms