RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 IGIPA6NJ69 53 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 NDUFA6P56556 154 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 ZNF664Q8N3J9 261 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 Q8N3U1 123 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 TIMM17AQ99595 171 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 KLK12Q9UKR0 248 aa8.43□□□□□ -1.06
SHMT2-221ENST00000555773 A0A096LNJ9 63 aa8.42□□□□□ -1.06
SHMT2-221ENST00000555773 TRAV8-3A0A0A6YYJ7 113 aa8.42□□□□□ -1.06
SHMT2-221ENST00000555773 LINC00310P59036 64 aa8.42□□□□□ -1.06
SHMT2-221ENST00000555773 Q6ZR54 194 aa8.42□□□□□ -1.06
SHMT2-221ENST00000555773 PRR34Q9NV39 138 aa8.42□□□□□ -1.06
SHMT2-221ENST00000555773 NUPR1O60356 82 aa8.41□□□□□ -1.06
SHMT2-221ENST00000555773 PMCHL1Q16048 86 aa8.41□□□□□ -1.06
SHMT2-221ENST00000555773 PDZD11Q5EBL8 140 aa8.41□□□□□ -1.06
SHMT2-221ENST00000555773 LINC00269Q8N2A0 174 aa8.41□□□□□ -1.06
SHMT2-221ENST00000555773 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-221ENST00000555773 ATP5LO75964 103 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 CRPP02741 224 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 REG3AQ06141 175 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 ENHOQ6UWT2 76 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 Q6ZN92 141 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 FAM19A2Q8N3H0 131 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 FAM104AQ969W3 186 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 UBE2WQ96B02 151 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 LYSTQ99698 3801 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 VCX2Q9H322 139 aa8.4□□□□□ -1.06
SHMT2-221ENST00000555773 KMT2CQ8NEZ4 4911 aaKnown RBP8.39□□□□□ -1.07
SHMT2-221ENST00000555773 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 M0R2N4 97 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 CCL25O15444 150 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 S100A6P06703 90 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 MIAQ16674 131 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 RMI2Q96E14 147 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 KRTAP1-5Q9BYS1 174 aa8.39□□□□□ -1.07
SHMT2-221ENST00000555773 LEPROTL1O95214 131 aa8.38□□□□□ -1.07
SHMT2-221ENST00000555773 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
SHMT2-221ENST00000555773 Q6ZUT4 128 aa8.38□□□□□ -1.07
SHMT2-221ENST00000555773 PACRGQ96M98 296 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-221ENST00000555773 AMELXQ99217 191 aa8.38□□□□□ -1.07
SHMT2-221ENST00000555773 OPRPNQ99935 248 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-221ENST00000555773 HSPB8Q9UJY1 196 aa8.38□□□□□ -1.07
SHMT2-221ENST00000555773 COX11Q9Y6N1 276 aa8.38□□□□□ -1.07
SHMT2-221ENST00000555773 C2orf88Q9BSF0 95 aa8.37□□□□□ -1.07
SHMT2-221ENST00000555773 TM2D2Q9BX73 214 aa8.37□□□□□ -1.07
SHMT2-221ENST00000555773 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
SHMT2-221ENST00000555773 LINC00959A0A1B0GUT2 108 aa8.36□□□□□ -1.07
SHMT2-221ENST00000555773 SS18Q15532 418 aa8.36□□□□□ -1.07
SHMT2-221ENST00000555773 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
SHMT2-221ENST00000555773 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
SHMT2-221ENST00000555773 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
SHMT2-221ENST00000555773 Q9HAA7 133 aa8.36□□□□□ -1.07
SHMT2-221ENST00000555773 KMT2AQ03164 3969 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 IFITM10A6NMD0 228 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 PRSS1P07477 247 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 PMVKQ15126 192 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
SHMT2-221ENST00000555773 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 BAALCQ8WXS3 180 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 RYR2Q92736 4967 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 HYDINQ4G0P3 5121 aa8.35□□□□□ -1.07
SHMT2-221ENST00000555773 TRAV13-1A0A0B4J241 112 aa8.34□□□□□ -1.07
SHMT2-221ENST00000555773 FABP4P15090 132 aa8.34□□□□□ -1.07
SHMT2-221ENST00000555773 SEC11AP67812 179 aa8.34□□□□□ -1.07
SHMT2-221ENST00000555773 LINC00173Q6ZV60 143 aa8.34□□□□□ -1.07
SHMT2-221ENST00000555773 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
SHMT2-221ENST00000555773 C5orf52A6NGY3 159 aa8.33□□□□□ -1.08
SHMT2-221ENST00000555773 PRSS29PA6NIE9 313 aa8.33□□□□□ -1.08
SHMT2-221ENST00000555773 S100A2P29034 98 aa8.33□□□□□ -1.08
SHMT2-221ENST00000555773 UBE2D1P51668 147 aa8.33□□□□□ -1.08
SHMT2-221ENST00000555773 SNRPEP62304 92 aaKnown RBP8.33□□□□□ -1.08
SHMT2-221ENST00000555773 HIST3H2BBQ8N257 126 aa8.33□□□□□ -1.08
SHMT2-221ENST00000555773 CHCHD10Q8WYQ3 142 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-221ENST00000555773 TRAV12-1A0A0B4J245 112 aa8.32□□□□□ -1.08
SHMT2-221ENST00000555773 ZC2HC1BQ5TFG8 222 aa8.32□□□□□ -1.08
SHMT2-221ENST00000555773 CD164L2Q6UWJ8 174 aa8.32□□□□□ -1.08
SHMT2-221ENST00000555773 FAM19A3Q7Z5A8 133 aa8.32□□□□□ -1.08
SHMT2-221ENST00000555773 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
SHMT2-221ENST00000555773 IGLV10-54A0A075B6I4 117 aa8.31□□□□□ -1.08
SHMT2-221ENST00000555773 PSCAO43653 123 aa8.31□□□□□ -1.08
SHMT2-221ENST00000555773 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
SHMT2-221ENST00000555773 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
SHMT2-221ENST00000555773 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
SHMT2-221ENST00000555773 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
SHMT2-221ENST00000555773 XCL1P47992 114 aa8.3□□□□□ -1.08
SHMT2-221ENST00000555773 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-221ENST00000555773 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
SHMT2-221ENST00000555773 TINCRA0A1B0GVN0 87 aa8.29□□□□□ -1.08
SHMT2-221ENST00000555773 HERVK_113P63121 156 aa8.29□□□□□ -1.08
SHMT2-221ENST00000555773 FOXI1Q12951 378 aa8.29□□□□□ -1.08
SHMT2-221ENST00000555773 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
SHMT2-221ENST00000555773 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
SHMT2-221ENST00000555773 IGHV3OR16-9A0A0B4J2B5 98 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms