RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 COX6A2Q02221 97 aa11.99□□□□□ -0.49
XRCC3-209ENST00000554913 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
XRCC3-209ENST00000554913 HIST2H2BDQ6DRA6 164 aa11.98□□□□□ -0.49
XRCC3-209ENST00000554913 MYO9AB2RTY4 2548 aa11.98□□□□□ -0.49
XRCC3-209ENST00000554913 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
XRCC3-209ENST00000554913 YAE1D1Q9NRH1 226 aa11.98□□□□□ -0.49
XRCC3-209ENST00000554913 LST1O00453 97 aa11.97□□□□□ -0.49
XRCC3-209ENST00000554913 ZNF843Q8N446 348 aa11.97□□□□□ -0.49
XRCC3-209ENST00000554913 C15orf53Q8NAA6 179 aa11.97□□□□□ -0.49
XRCC3-209ENST00000554913 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
XRCC3-209ENST00000554913 A0A096LNT2 108 aa11.96□□□□□ -0.49
XRCC3-209ENST00000554913 TIMM17BO60830 172 aa11.96□□□□□ -0.49
XRCC3-209ENST00000554913 DSCR9P59020 149 aa11.96□□□□□ -0.49
XRCC3-209ENST00000554913 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
XRCC3-209ENST00000554913 TENM4Q6N022 2769 aa11.96□□□□□ -0.49
XRCC3-209ENST00000554913 A0A0U1RRA0 63 aa11.96□□□□□ -0.5
XRCC3-209ENST00000554913 H3BT86 120 aa11.96□□□□□ -0.5
XRCC3-209ENST00000554913 NDUFA1O15239 70 aa11.96□□□□□ -0.5
XRCC3-209ENST00000554913 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.5
XRCC3-209ENST00000554913 Q6YL49 198 aa11.96□□□□□ -0.5
XRCC3-209ENST00000554913 DNAJC30Q96LL9 226 aa11.96□□□□□ -0.5
XRCC3-209ENST00000554913 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.5
XRCC3-209ENST00000554913 IGHV3OR16-12A0A075B7B8 117 aa11.95□□□□□ -0.5
XRCC3-209ENST00000554913 IFITM1P13164 125 aa11.95□□□□□ -0.5
XRCC3-209ENST00000554913 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
XRCC3-209ENST00000554913 TIRAPP58753 221 aa11.95□□□□□ -0.5
XRCC3-209ENST00000554913 IGLV5-45A0A087WSX0 123 aa11.95□□□□□ -0.5
XRCC3-209ENST00000554913 BEAN1Q3B7T3 259 aa11.95□□□□□ -0.5
XRCC3-209ENST00000554913 APCP25054 2843 aa11.94□□□□□ -0.5
XRCC3-209ENST00000554913 Q9H8V8 135 aa11.94□□□□□ -0.5
XRCC3-209ENST00000554913 J3QLI3 93 aa11.94□□□□□ -0.5
XRCC3-209ENST00000554913 RS1O15537 224 aa11.94□□□□□ -0.5
XRCC3-209ENST00000554913 NDUFA7O95182 113 aa11.94□□□□□ -0.5
XRCC3-209ENST00000554913 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 LINC00694P0DN24 101 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 LINC00242Q5T6M2 205 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 LINC00308Q8TCZ7 52 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 NAV2Q8IVL1 2488 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
XRCC3-209ENST00000554913 GAGE5Q13069 117 aa11.92□□□□□ -0.5
XRCC3-209ENST00000554913 GAGE6Q13070 117 aa11.92□□□□□ -0.5
XRCC3-209ENST00000554913 KHDC1LQ5JSQ8 128 aa11.92□□□□□ -0.5
XRCC3-209ENST00000554913 XCL2Q9UBD3 114 aa11.92□□□□□ -0.5
XRCC3-209ENST00000554913 INSP01308 110 aa11.92□□□□□ -0.5
XRCC3-209ENST00000554913 B5MCH6 92 aa11.91□□□□□ -0.5
XRCC3-209ENST00000554913 CIRBPQ14011 172 aaKnown RBP11.91□□□□□ -0.5
XRCC3-209ENST00000554913 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
XRCC3-209ENST00000554913 SS18L2Q9UHA2 77 aa11.91□□□□□ -0.5
XRCC3-209ENST00000554913 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
XRCC3-209ENST00000554913 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
XRCC3-209ENST00000554913 FSHBP01225 129 aa11.9□□□□□ -0.5
XRCC3-209ENST00000554913 Q6Q795 121 aa11.9□□□□□ -0.5
XRCC3-209ENST00000554913 CUBNO60494 3623 aa11.9□□□□□ -0.5
XRCC3-209ENST00000554913 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
XRCC3-209ENST00000554913 WNK1Q9H4A3 2382 aa11.89□□□□□ -0.51
XRCC3-209ENST00000554913 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
XRCC3-209ENST00000554913 HERVK_113P63121 156 aa11.89□□□□□ -0.51
XRCC3-209ENST00000554913 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
XRCC3-209ENST00000554913 DEFB121Q5J5C9 76 aa11.89□□□□□ -0.51
XRCC3-209ENST00000554913 TRGV1A0A0A0MS02 117 aa11.88□□□□□ -0.51
XRCC3-209ENST00000554913 SMIM1B2RUZ4 78 aa11.88□□□□□ -0.51
XRCC3-209ENST00000554913 Q8N2B8 174 aa11.88□□□□□ -0.51
XRCC3-209ENST00000554913 TLN2Q9Y4G6 2542 aa11.88□□□□□ -0.51
XRCC3-209ENST00000554913 CCDC179H3BU77 68 aa11.88□□□□□ -0.51
XRCC3-209ENST00000554913 KRTAP10-9P60411 292 aa11.88□□□□□ -0.51
XRCC3-209ENST00000554913 NTM-AS1Q6ZSK4 140 aa11.87□□□□□ -0.51
XRCC3-209ENST00000554913 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
XRCC3-209ENST00000554913 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
XRCC3-209ENST00000554913 IGHV4-31P0DP07 118 aa11.86□□□□□ -0.51
XRCC3-209ENST00000554913 ODF3L2Q3SX64 289 aa11.86□□□□□ -0.51
XRCC3-209ENST00000554913 FAM240AA0A1B0GVK7 77 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 PRIMA1Q86XR5 153 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 COX7A2LO14548 114 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 GAGE7O76087 117 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 GAGE12FP0CL80 117 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 GAGE12GP0CL81 117 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 GAGE12IP0CL82 117 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 GAGE4Q13068 117 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
XRCC3-209ENST00000554913 Q6ZTI0 123 aa11.84□□□□□ -0.51
XRCC3-209ENST00000554913 SHISA2Q6UWI4 295 aa11.84□□□□□ -0.51
XRCC3-209ENST00000554913 HELZ2Q9BYK8 2649 aaKnown RBP11.83□□□□□ -0.52
XRCC3-209ENST00000554913 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
XRCC3-209ENST00000554913 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
XRCC3-209ENST00000554913 F5H768 121 aa11.83□□□□□ -0.52
XRCC3-209ENST00000554913 MRPL23Q16540 153 aaKnown RBP11.83□□□□□ -0.52
XRCC3-209ENST00000554913 FAM19A3Q7Z5A8 133 aa11.83□□□□□ -0.52
XRCC3-209ENST00000554913 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
XRCC3-209ENST00000554913 CCDC168Q8NDH2 2452 aa11.83□□□□□ -0.52
XRCC3-209ENST00000554913 K7EQD1 137 aa11.82□□□□□ -0.52
XRCC3-209ENST00000554913 STHQ8IWL8 128 aa11.82□□□□□ -0.52
XRCC3-209ENST00000554913 CDC42SE2Q9NRR3 84 aa11.82□□□□□ -0.52
XRCC3-209ENST00000554913 CR1P17927 2039 aa11.82□□□□□ -0.52
XRCC3-209ENST00000554913 Q96MF0 132 aa11.82□□□□□ -0.52
XRCC3-209ENST00000554913 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
XRCC3-209ENST00000554913 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
XRCC3-209ENST00000554913 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms