RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
PCNX1-209ENST00000554879 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
PCNX1-209ENST00000554879 SVEP1Q4LDE5 3571 aa12.3□□□□□ -0.44
PCNX1-209ENST00000554879 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
PCNX1-209ENST00000554879 SUMO2P61956 95 aaKnown RBP12.29□□□□□ -0.44
PCNX1-209ENST00000554879 IGKV3D-7A0A0C4DH55 119 aa12.29□□□□□ -0.44
PCNX1-209ENST00000554879 UQCRQO14949 82 aa12.29□□□□□ -0.44
PCNX1-209ENST00000554879 MRAPQ8TCY5 172 aa12.28□□□□□ -0.44
PCNX1-209ENST00000554879 TRBV7-3A0A075B6L6 115 aa12.28□□□□□ -0.44
PCNX1-209ENST00000554879 HTN3P15516 51 aa12.27□□□□□ -0.44
PCNX1-209ENST00000554879 CMC4P56277 68 aaPredicted RBP12.27□□□□□ -0.44
PCNX1-209ENST00000554879 CELSR1Q9NYQ6 3014 aa12.27□□□□□ -0.45
PCNX1-209ENST00000554879 CR1P17927 2039 aa12.27□□□□□ -0.45
PCNX1-209ENST00000554879 DEFB130BP0DP73 79 aa12.27□□□□□ -0.45
PCNX1-209ENST00000554879 DEFB130AP0DP74 79 aa12.27□□□□□ -0.45
PCNX1-209ENST00000554879 WFDC10AQ9H1F0 79 aa12.27□□□□□ -0.45
PCNX1-209ENST00000554879 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
PCNX1-209ENST00000554879 ZNF580Q9UK33 172 aa12.26□□□□□ -0.45
PCNX1-209ENST00000554879 J3QQQ9 107 aa12.26□□□□□ -0.45
PCNX1-209ENST00000554879 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
PCNX1-209ENST00000554879 IGKV3OR2-268A0A0C4DH90 116 aa12.25□□□□□ -0.45
PCNX1-209ENST00000554879 SOCS3O14543 225 aa12.25□□□□□ -0.45
PCNX1-209ENST00000554879 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
PCNX1-209ENST00000554879 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
PCNX1-209ENST00000554879 TP53TG1Q9Y2A0 90 aa12.25□□□□□ -0.45
PCNX1-209ENST00000554879 SDHAF1A6NFY7 115 aa12.25□□□□□ -0.45
PCNX1-209ENST00000554879 TRGV4A0A0C4DH28 118 aa12.25□□□□□ -0.45
PCNX1-209ENST00000554879 TRBV10-2A0A0K0K1G8 114 aa12.24□□□□□ -0.45
PCNX1-209ENST00000554879 SMIM2Q9BVW6 85 aa12.24□□□□□ -0.45
PCNX1-209ENST00000554879 NF1P21359 2839 aa12.24□□□□□ -0.45
PCNX1-209ENST00000554879 BRK1Q8WUW1 75 aa12.23□□□□□ -0.45
PCNX1-209ENST00000554879 FBN2P35556 2912 aa12.23□□□□□ -0.45
PCNX1-209ENST00000554879 CSMD1Q96PZ7 3565 aa12.23□□□□□ -0.45
PCNX1-209ENST00000554879 VCYO14598 125 aa12.23□□□□□ -0.45
PCNX1-209ENST00000554879 IGHV3-38A0A0C4DH36 116 aa12.23□□□□□ -0.45
PCNX1-209ENST00000554879 RHOHQ15669 191 aa12.23□□□□□ -0.45
PCNX1-209ENST00000554879 C4orf26Q17RF5 130 aa12.23□□□□□ -0.45
PCNX1-209ENST00000554879 SETXQ7Z333 2677 aaKnown RBP12.22□□□□□ -0.45
PCNX1-209ENST00000554879 MAST4O15021 2626 aa12.22□□□□□ -0.45
PCNX1-209ENST00000554879 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
PCNX1-209ENST00000554879 S100A7L2Q5SY68 101 aa12.21□□□□□ -0.45
PCNX1-209ENST00000554879 Q8N2B8 174 aa12.21□□□□□ -0.45
PCNX1-209ENST00000554879 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.21□□□□□ -0.45
PCNX1-209ENST00000554879 CEMP1Q6PRD7 247 aaPredicted RBP12.21□□□□□ -0.46
PCNX1-209ENST00000554879 KLK9Q2XQG4 91 aa12.21□□□□□ -0.46
PCNX1-209ENST00000554879 SUMO4Q6EEV6 95 aa12.21□□□□□ -0.46
PCNX1-209ENST00000554879 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
PCNX1-209ENST00000554879 RASL10AQ92737 203 aa12.2□□□□□ -0.46
PCNX1-209ENST00000554879 KLLNB2CW77 178 aa12.19□□□□□ -0.46
PCNX1-209ENST00000554879 RNASE3P12724 160 aaKnown RBP12.19□□□□□ -0.46
PCNX1-209ENST00000554879 UBE2L6O14933 153 aa12.19□□□□□ -0.46
PCNX1-209ENST00000554879 RNF185Q96GF1 192 aa12.18□□□□□ -0.46
PCNX1-209ENST00000554879 SDIM1Q6ZPB5 146 aa12.18□□□□□ -0.46
PCNX1-209ENST00000554879 TENM4Q6N022 2769 aa12.18□□□□□ -0.46
PCNX1-209ENST00000554879 ODF3L2Q3SX64 289 aa12.17□□□□□ -0.46
PCNX1-209ENST00000554879 Q6Q795 121 aa12.17□□□□□ -0.46
PCNX1-209ENST00000554879 C9orf66Q5T8R8 295 aa12.17□□□□□ -0.46
PCNX1-209ENST00000554879 ODF3Q96PU9 254 aa12.17□□□□□ -0.46
PCNX1-209ENST00000554879 MXRA5Q9NR99 2828 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 A0A0J9YY99 117 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 ATOX1O00244 68 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 DAND5Q8N907 189 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 BAALCQ8WXS3 180 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 UBE2D3P61077 147 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 UBE2D2P62837 147 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 KRTAP1-1Q07627 177 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
PCNX1-209ENST00000554879 KIR2DL5BQ8NHK3 375 aa12.15□□□□□ -0.46
PCNX1-209ENST00000554879 TMEM243Q9BU79 118 aa12.15□□□□□ -0.46
PCNX1-209ENST00000554879 V9GYY9 64 aa12.15□□□□□ -0.46
PCNX1-209ENST00000554879 PROK1P58294 105 aa12.15□□□□□ -0.46
PCNX1-209ENST00000554879 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
PCNX1-209ENST00000554879 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
PCNX1-209ENST00000554879 LINC00482Q8N8I6 264 aa12.15□□□□□ -0.46
PCNX1-209ENST00000554879 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
PCNX1-209ENST00000554879 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 P0DMU3 169 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 FAM231AP0DMU4 169 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 FAM231CP0DMU5 169 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 DEFB4AO15263 64 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 RBM3P98179 157 aaKnown RBP12.14□□□□□ -0.47
PCNX1-209ENST00000554879 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 TRIAP1O43715 76 aa12.14□□□□□ -0.47
PCNX1-209ENST00000554879 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
PCNX1-209ENST00000554879 C16orf95Q9H693 158 aa12.13□□□□□ -0.47
PCNX1-209ENST00000554879 MED14OSP0DP75 135 aa12.12□□□□□ -0.47
PCNX1-209ENST00000554879 COX7CP15954 63 aa12.12□□□□□ -0.47
PCNX1-209ENST00000554879 BAALC-AS2P0C853 105 aa12.12□□□□□ -0.47
PCNX1-209ENST00000554879 UBE2D1P51668 147 aa12.12□□□□□ -0.47
PCNX1-209ENST00000554879 LINC00643Q86TS7 51 aa12.12□□□□□ -0.47
PCNX1-209ENST00000554879 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
PCNX1-209ENST00000554879 TRAV12-1A0A0B4J245 112 aa12.12□□□□□ -0.47
PCNX1-209ENST00000554879 I3L3M4 83 aa12.11□□□□□ -0.47
PCNX1-209ENST00000554879 DEFB135Q30KP9 77 aa12.11□□□□□ -0.47
PCNX1-209ENST00000554879 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
PCNX1-209ENST00000554879 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
PCNX1-209ENST00000554879 BAHCC1Q9P281 2608 aa12.1□□□□□ -0.47
PCNX1-209ENST00000554879 A0A0B4J2C4 111 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms