RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 TIAM2Q8IVF5 1701 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 RGPD8O14715 1765 aaPredicted RBP-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 RGPD5Q99666 1765 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 F5P12259 2224 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 C10orf142B7Z368 130 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 M0R2P5 195 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 DEGS1O15121 323 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 TNFSF15O95150 251 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 IFITM1P13164 125 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 NPC2P61916 151 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 TCTE3Q8IZS6 198 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 C4orf33Q8N1A6 199 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 COX7B2Q8TF08 81 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 SPANXCQ9NY87 97 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 HIGD1AQ9Y241 93 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 KNDC1Q76NI1 1749 aa-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 VIRMAQ69YN4 1812 aaKnown RBP-0.25□□□□□ -2.45
SCFD1-214ENST00000554819 ESPL1Q14674 2120 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 MAP3K4Q9Y6R4 1608 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 ARHGEF12Q9NZN5 1544 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 NKTRP30414 1462 aaKnown RBP-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 TRBV7-1A0A0A6YYK4 115 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 BORCS7-ASMTA0A0B4J1R7 106 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 J3QLW9 94 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 MT1FP04733 61 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 CLLU1Q5K131 121 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 SLC48A1Q6P1K1 146 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 C20orf197Q8N268 126 aa-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 LSM2Q9Y333 95 aaKnown RBP-0.26□□□□□ -2.45
SCFD1-214ENST00000554819 CASZ1Q86V15 1759 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 ZNF831Q5JPB2 1677 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 KIAA0100Q14667 2235 aaKnown RBP-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 TRAV12-3A0A0B4J271 114 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 GNG14A0A1W2PPG7 69 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 TMEM14DPA8MWL7 114 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 H0YAA0 97 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 MT2AP02795 61 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 MT1HL1P0DM35 61 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 MORN2Q502X0 79 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 FAM74A4Q5TZK3 123 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 Q6ZRX8 168 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 SPANXA1Q9NS26 97 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 V9GYV3 84 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 TANC2Q9HCD6 1990 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 UBR3Q6ZT12 1888 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 ZNF236Q9UL36 1845 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 WIZO95785 1651 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 ZC3H13Q5T200 1668 aaKnown RBP-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 BIVM-ERCC5R4GMW8 1640 aa-0.27□□□□□ -2.45
SCFD1-214ENST00000554819 NRKQ7Z2Y5 1582 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 ERCC6Q03468 1493 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 SHANK2Q9UPX8 1470 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 PLXNA2O75051 1894 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 TSC2P49815 1807 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 TRBV20-1A0A075B6N2 111 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 ACYP2P14621 99 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 CMPK1P30085 196 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 INSL4Q14641 139 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 CCDC153Q494R4 210 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 LINC01545Q5VT33 79 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 MT1MQ8N339 61 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 SELENOSQ9BQE4 189 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 CYP4F30PQ9H0H9 118 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 SPAG17Q6Q759 2223 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 TMEM131LA2VDJ0 1609 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 CLASP1Q7Z460 1538 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 LRRC7Q96NW7 1537 aa-0.28□□□□□ -2.45
SCFD1-214ENST00000554819 MYH1P12882 1939 aa-0.28□□□□□ -2.46
SCFD1-214ENST00000554819 DNAJC13O75165 2243 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 MYOM1P52179 1685 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 TRGV1A0A0A0MS02 117 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 H0YJX3 145 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 DBIP07108 87 aaKnown RBP-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 NEFHP12036 1026 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 MT1GP13640 62 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 GCHFRP30047 84 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 COX6B2Q6YFQ2 88 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 DPH3Q96FX2 82 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 BATF3Q9NR55 127 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 NDUFA12Q9UI09 145 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 SCP2D1Q9UJQ7 156 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 PEG3Q9GZU2 1588 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 EFCAB6Q5THR3 1501 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 PXDNQ92626 1479 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 MBD5Q9P267 1494 aa-0.29□□□□□ -2.46
SCFD1-214ENST00000554819 LRRC37A2A6NM11 1700 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 PLCH1Q4KWH8 1693 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 HELZP42694 1942 aaKnown RBP-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 ADGRB1O14514 1584 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 UGGT1Q9NYU2 1555 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 ZNF815PA8K554 130 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 G3V318 75 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 EDDM3BP56851 147 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 HAMPP81172 84 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 DEFA5Q01523 94 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 TAC4Q86UU9 113 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 VSTM2AQ8TAG5 236 aa-0.3□□□□□ -2.46
SCFD1-214ENST00000554819 DEFB104AQ8WTQ1 72 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms