RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 VCYO14598 125 aa13.25□□□□□ -0.29
HIF1A-206ENST00000553999 CKS2P33552 79 aa13.25□□□□□ -0.29
HIF1A-206ENST00000553999 SMDT1Q9H4I9 107 aa13.25□□□□□ -0.29
HIF1A-206ENST00000553999 SRRM2Q9UQ35 2752 aaKnown RBP13.24□□□□□ -0.29
HIF1A-206ENST00000553999 LINC00959A0A1B0GUT2 108 aa13.24□□□□□ -0.29
HIF1A-206ENST00000553999 CNBPP62633 177 aaKnown RBP13.24□□□□□ -0.29
HIF1A-206ENST00000553999 HBBP68871 147 aa13.24□□□□□ -0.29
HIF1A-206ENST00000553999 FOXI1Q12951 378 aa13.24□□□□□ -0.29
HIF1A-206ENST00000553999 SDIM1Q6ZPB5 146 aa13.24□□□□□ -0.29
HIF1A-206ENST00000553999 LINC00526Q96FQ7 95 aa13.24□□□□□ -0.29
HIF1A-206ENST00000553999 DPH3Q96FX2 82 aa13.24□□□□□ -0.29
HIF1A-206ENST00000553999 IGHV3-64A0A075B6Q5 118 aa13.23□□□□□ -0.29
HIF1A-206ENST00000553999 D6R8Y8 96 aa13.23□□□□□ -0.29
HIF1A-206ENST00000553999 RAB14P61106 215 aa13.23□□□□□ -0.29
HIF1A-206ENST00000553999 KIR2DL4Q99706 377 aa13.23□□□□□ -0.29
HIF1A-206ENST00000553999 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
HIF1A-206ENST00000553999 CFAP161Q6P656 301 aa13.22□□□□□ -0.29
HIF1A-206ENST00000553999 PPP1R17O96001 155 aa13.21□□□□□ -0.29
HIF1A-206ENST00000553999 NPYP01303 97 aa13.21□□□□□ -0.29
HIF1A-206ENST00000553999 ZNF664Q8N3J9 261 aa13.21□□□□□ -0.29
HIF1A-206ENST00000553999 CDC42SE2Q9NRR3 84 aa13.21□□□□□ -0.29
HIF1A-206ENST00000553999 A0A1B0GW15 77 aa13.2□□□□□ -0.3
HIF1A-206ENST00000553999 A0A1B0GXF2 115 aa13.2□□□□□ -0.3
HIF1A-206ENST00000553999 TNFRSF6BO95407 300 aa13.2□□□□□ -0.3
HIF1A-206ENST00000553999 SS18Q15532 418 aa13.2□□□□□ -0.3
HIF1A-206ENST00000553999 Q6ZUT4 128 aa13.2□□□□□ -0.3
HIF1A-206ENST00000553999 MRPL52Q86TS9 123 aaKnown RBP13.2□□□□□ -0.3
HIF1A-206ENST00000553999 F8W036 122 aa13.19□□□□□ -0.3
HIF1A-206ENST00000553999 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
HIF1A-206ENST00000553999 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
HIF1A-206ENST00000553999 UBE2D4Q9Y2X8 147 aa13.19□□□□□ -0.3
HIF1A-206ENST00000553999 TRAV13-1A0A0B4J241 112 aa13.18□□□□□ -0.3
HIF1A-206ENST00000553999 IGKV2-24A0A0C4DH68 120 aa13.18□□□□□ -0.3
HIF1A-206ENST00000553999 J3QL48 77 aa13.18□□□□□ -0.3
HIF1A-206ENST00000553999 TCAPO15273 167 aa13.18□□□□□ -0.3
HIF1A-206ENST00000553999 S100A8P05109 93 aa13.18□□□□□ -0.3
HIF1A-206ENST00000553999 KRTAP10-4P60372 401 aaPredicted RBP13.18□□□□□ -0.3
HIF1A-206ENST00000553999 RPL39P62891 51 aaKnown RBP13.18□□□□□ -0.3
HIF1A-206ENST00000553999 COX6A2Q02221 97 aa13.18□□□□□ -0.3
HIF1A-206ENST00000553999 SMIM2Q9BVW6 85 aa13.18□□□□□ -0.3
HIF1A-206ENST00000553999 GVQW2A0A096LPI5 108 aaPredicted RBP13.17□□□□□ -0.3
HIF1A-206ENST00000553999 LINC00862A6NCI5 91 aa13.16□□□□□ -0.3
HIF1A-206ENST00000553999 PRSS3P2Q8NHM4 247 aa13.16□□□□□ -0.3
HIF1A-206ENST00000553999 OPRPNQ99935 248 aaPredicted RBP13.15□□□□□ -0.3
HIF1A-206ENST00000553999 C20orf78Q9BR46 151 aa13.15□□□□□ -0.3
HIF1A-206ENST00000553999 A0A087WYN8 130 aa13.14□□□□□ -0.31
HIF1A-206ENST00000553999 MAJINQ3KP22 176 aa13.14□□□□□ -0.31
HIF1A-206ENST00000553999 DMBT1Q9UGM3 2413 aaPredicted RBP13.14□□□□□ -0.31
HIF1A-206ENST00000553999 MYCBP2O75592 4640 aa13.14□□□□□ -0.31
HIF1A-206ENST00000553999 TRBV24-1A0A075B6N3 115 aa13.13□□□□□ -0.31
HIF1A-206ENST00000553999 IGHV1-58A0A0C4DH39 117 aa13.13□□□□□ -0.31
HIF1A-206ENST00000553999 HNRNPA3P51991 378 aaKnown RBP13.13□□□□□ -0.31
HIF1A-206ENST00000553999 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
HIF1A-206ENST00000553999 SPACA4Q8TDM5 124 aa13.13□□□□□ -0.31
HIF1A-206ENST00000553999 PRELID3AQ96N28 172 aa13.13□□□□□ -0.31
HIF1A-206ENST00000553999 LOC389332A0A1B0GUA5 103 aa13.12□□□□□ -0.31
HIF1A-206ENST00000553999 MT-ND4LP03901 98 aa13.12□□□□□ -0.31
HIF1A-206ENST00000553999 MALP21145 153 aa13.12□□□□□ -0.31
HIF1A-206ENST00000553999 C5orf38Q86SI9 138 aa13.12□□□□□ -0.31
HIF1A-206ENST00000553999 ORMDL3Q8N138 153 aa13.12□□□□□ -0.31
HIF1A-206ENST00000553999 TMEM18Q96B42 140 aa13.12□□□□□ -0.31
HIF1A-206ENST00000553999 PNRC1Q12796 327 aaPredicted RBP13.11□□□□□ -0.31
HIF1A-206ENST00000553999 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
HIF1A-206ENST00000553999 TMEM136Q6ZRR5 245 aa13.11□□□□□ -0.31
HIF1A-206ENST00000553999 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
HIF1A-206ENST00000553999 CARD19Q96LW7 228 aa13.11□□□□□ -0.31
HIF1A-206ENST00000553999 A0A096LNI7 61 aa13.1□□□□□ -0.31
HIF1A-206ENST00000553999 ZNF561-AS1K7EIQ3 104 aa13.1□□□□□ -0.31
HIF1A-206ENST00000553999 COX7A2LO14548 114 aa13.1□□□□□ -0.31
HIF1A-206ENST00000553999 SMAGPQ0VAQ4 97 aa13.1□□□□□ -0.31
HIF1A-206ENST00000553999 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
HIF1A-206ENST00000553999 C1orf196B1AJZ1 125 aa13.09□□□□□ -0.31
HIF1A-206ENST00000553999 RPL32P62910 135 aaKnown RBP13.09□□□□□ -0.31
HIF1A-206ENST00000553999 IFITM2Q01629 132 aa13.09□□□□□ -0.31
HIF1A-206ENST00000553999 ANAPC16Q96DE5 110 aa13.09□□□□□ -0.31
HIF1A-206ENST00000553999 PPBPP02775 128 aa13.08□□□□□ -0.32
HIF1A-206ENST00000553999 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
HIF1A-206ENST00000553999 IGLV4-69A0A075B6H9 119 aa13.07□□□□□ -0.32
HIF1A-206ENST00000553999 ADCYAP1P18509 176 aa13.07□□□□□ -0.32
HIF1A-206ENST00000553999 RAB5AP20339 215 aa13.07□□□□□ -0.32
HIF1A-206ENST00000553999 SYCNQ0VAF6 134 aa13.07□□□□□ -0.32
HIF1A-206ENST00000553999 TIMM21Q9BVV7 248 aa13.07□□□□□ -0.32
HIF1A-206ENST00000553999 STPG4Q8N801 248 aa13.06□□□□□ -0.32
HIF1A-206ENST00000553999 FAM104AQ969W3 186 aa13.06□□□□□ -0.32
HIF1A-206ENST00000553999 IFITM10A6NMD0 228 aa13.05□□□□□ -0.32
HIF1A-206ENST00000553999 PHOX2AO14813 284 aa13.05□□□□□ -0.32
HIF1A-206ENST00000553999 SPANXA1Q9NS26 97 aa13.05□□□□□ -0.32
HIF1A-206ENST00000553999 HERC1Q15751 4861 aa13.05□□□□□ -0.32
HIF1A-206ENST00000553999 Q6ZRU5 148 aa13.04□□□□□ -0.32
HIF1A-206ENST00000553999 MAP1LC3AQ9H492 121 aa13.04□□□□□ -0.32
HIF1A-206ENST00000553999 KRTAP29-1A8MX34 341 aaPredicted RBP13.03□□□□□ -0.32
HIF1A-206ENST00000553999 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
HIF1A-206ENST00000553999 CAMK2N2Q96S95 79 aa13.03□□□□□ -0.32
HIF1A-206ENST00000553999 PLAC8Q9NZF1 115 aa13.03□□□□□ -0.32
HIF1A-206ENST00000553999 GAGE2BQ13066 116 aa13.02□□□□□ -0.33
HIF1A-206ENST00000553999 A0A0J9YXV3 536 aa13.01□□□□□ -0.33
HIF1A-206ENST00000553999 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
HIF1A-206ENST00000553999 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
HIF1A-206ENST00000553999 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
HIF1A-206ENST00000553999 TMEM218A2RU14 115 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms