RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 LYRM2Q9NU23 88 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-223ENST00000553686 TRBV25-1A0A075B6N4 114 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 GVQW2A0A096LPI5 108 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-223ENST00000553686 LOC107984640A0A0U1RRK4 108 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 KANTRA0A1W2PQU2 76 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 FGF6P10767 208 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
ATXN3-223ENST00000553686 RPL29P47914 159 aaKnown RBP3.32□□□□□ -1.88
ATXN3-223ENST00000553686 RANP62826 216 aaKnown RBP3.32□□□□□ -1.88
ATXN3-223ENST00000553686 C9orf116Q5BN46 136 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-223ENST00000553686 MIC13Q5XKP0 118 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 TMEM14EPQ6UXP3 125 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 STOML3Q8TAV4 291 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 CMTM2Q8TAZ6 248 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 CARD19Q96LW7 228 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 SEC22CQ9BRL7 303 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 OR5AC2Q9NZP5 309 aa3.32□□□□□ -1.88
ATXN3-223ENST00000553686 F6UZH7 168 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 PET100P0DJ07 73 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 H2BFSP57053 126 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 TAS2R30P59541 319 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 FLI1Q01543 452 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-223ENST00000553686 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 FAM74A1Q5RGS3 127 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 Q6ZVH6 145 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 PHF5AQ7RTV0 110 aaKnown RBP3.31□□□□□ -1.88
ATXN3-223ENST00000553686 DERL1Q9BUN8 251 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
ATXN3-223ENST00000553686 FXYD6-FXYD2A0A087WZ82 144 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 ARPC5O15511 151 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 SSSCA1O60232 199 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 TPT1P13693 172 aaKnown RBP3.3□□□□□ -1.88
ATXN3-223ENST00000553686 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 C20orf203Q8NBC4 194 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 ISOC2Q96AB3 205 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 SFRP2Q96HF1 295 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 AQP10Q96PS8 301 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 MBD2Q9UBB5 411 aa3.3□□□□□ -1.88
ATXN3-223ENST00000553686 TRBV6-1A0A0K0K1D8 114 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 A0A0U1RRA0 63 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 C9orf170A2RU37 121 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 RAB4BP61018 213 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 IQCJQ1A5X6 159 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 TMEM128Q5BJH2 165 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-223ENST00000553686 TVP23CQ96ET8 276 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 SLC25A2Q9BXI2 301 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 IL36BQ9NZH7 164 aa3.29□□□□□ -1.88
ATXN3-223ENST00000553686 IGLV4-60A0A075B6I1 120 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 IGHV1-58A0A0C4DH39 117 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 ZNF861PO60384 105 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 SNAPINO95295 136 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 SFT2D2O95562 160 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 GCGP01275 180 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 PPP1R1AQ13522 171 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 GOLT1AQ6ZVE7 132 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 LINC00304Q8N9R0 145 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 PPP1R1CQ8WVI7 109 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 FXYD5Q96DB9 178 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 FAM167A-AS1Q96KT0 104 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-223ENST00000553686 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 LINC00846Q9NV44 126 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 UQCC1Q9NVA1 299 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 PSG8Q9UQ74 426 aa3.28□□□□□ -1.88
ATXN3-223ENST00000553686 OR7C2O60412 319 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 SIX6O95475 246 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-223ENST00000553686 SSTP61278 116 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 UBE2BP63146 152 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 BAXQ07812 192 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 KRTAP19-2Q3LHN2 52 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 MIR17HGQ75NE6 70 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-223ENST00000553686 TMEM243Q9BU79 118 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-223ENST00000553686 OTORQ9NRC9 128 aa3.27□□□□□ -1.89
ATXN3-223ENST00000553686 IGLV4-69A0A075B6H9 119 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 FABP5P3A8MUU1 101 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 K7EQM0 130 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 UBE2L6O14933 153 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 APOMO95445 188 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 ARMS2P0C7Q2 107 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 UBE2L3P68036 154 aaKnown RBP3.26□□□□□ -1.89
ATXN3-223ENST00000553686 CXCL6P80162 114 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms