RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 TSHBP01222 138 aa10.23□□□□□ -0.77
CDK4-215ENST00000553237 LINC00862A6NCI5 91 aa10.22□□□□□ -0.77
CDK4-215ENST00000553237 J3QL48 77 aa10.22□□□□□ -0.77
CDK4-215ENST00000553237 VCYO14598 125 aa10.22□□□□□ -0.77
CDK4-215ENST00000553237 CKS2P33552 79 aa10.22□□□□□ -0.77
CDK4-215ENST00000553237 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
CDK4-215ENST00000553237 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
CDK4-215ENST00000553237 ATP5L2Q7Z4Y8 100 aa10.22□□□□□ -0.77
CDK4-215ENST00000553237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
CDK4-215ENST00000553237 H7C423 109 aa10.21□□□□□ -0.77
CDK4-215ENST00000553237 PANO1I0J062 215 aa10.21□□□□□ -0.77
CDK4-215ENST00000553237 SLPIP03973 132 aa10.21□□□□□ -0.77
CDK4-215ENST00000553237 FGF6P10767 208 aa10.21□□□□□ -0.77
CDK4-215ENST00000553237 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
CDK4-215ENST00000553237 AP5S1Q9NUS5 200 aa10.21□□□□□ -0.77
CDK4-215ENST00000553237 ESDP10768 282 aa10.2□□□□□ -0.78
CDK4-215ENST00000553237 CNBPP62633 177 aaKnown RBP10.2□□□□□ -0.78
CDK4-215ENST00000553237 SEC11CQ9BY50 192 aa10.2□□□□□ -0.78
CDK4-215ENST00000553237 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
CDK4-215ENST00000553237 D6R8Y8 96 aa10.19□□□□□ -0.78
CDK4-215ENST00000553237 FCER1GP30273 86 aa10.19□□□□□ -0.78
CDK4-215ENST00000553237 CHCHD10Q8WYQ3 142 aaPredicted RBP10.19□□□□□ -0.78
CDK4-215ENST00000553237 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
CDK4-215ENST00000553237 TNFRSF6BO95407 300 aa10.18□□□□□ -0.78
CDK4-215ENST00000553237 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
CDK4-215ENST00000553237 BTF3L4Q96K17 158 aa10.18□□□□□ -0.78
CDK4-215ENST00000553237 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
CDK4-215ENST00000553237 IGHV3-64A0A075B6Q5 118 aa10.17□□□□□ -0.78
CDK4-215ENST00000553237 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
CDK4-215ENST00000553237 C7orf77A4D0Y5 90 aa10.17□□□□□ -0.78
CDK4-215ENST00000553237 PPBPP02775 128 aa10.17□□□□□ -0.78
CDK4-215ENST00000553237 ZNF25P17030 456 aaPredicted RBP10.17□□□□□ -0.78
CDK4-215ENST00000553237 RPL37AP61513 92 aaKnown RBP10.17□□□□□ -0.78
CDK4-215ENST00000553237 HIGD2BQ4VC39 106 aa10.17□□□□□ -0.78
CDK4-215ENST00000553237 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
CDK4-215ENST00000553237 DPH3Q96FX2 82 aa10.17□□□□□ -0.78
CDK4-215ENST00000553237 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
CDK4-215ENST00000553237 KRTAP29-1A8MX34 341 aaPredicted RBP10.16□□□□□ -0.78
CDK4-215ENST00000553237 NPYP01303 97 aa10.16□□□□□ -0.78
CDK4-215ENST00000553237 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
CDK4-215ENST00000553237 RPL32P62910 135 aaKnown RBP10.16□□□□□ -0.78
CDK4-215ENST00000553237 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
CDK4-215ENST00000553237 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
CDK4-215ENST00000553237 OR5A1Q8NGJ0 315 aa10.16□□□□□ -0.78
CDK4-215ENST00000553237 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
CDK4-215ENST00000553237 CTDSP1Q9GZU7 261 aa10.16□□□□□ -0.78
CDK4-215ENST00000553237 PHOX2AO14813 284 aa10.15□□□□□ -0.78
CDK4-215ENST00000553237 XCL1P47992 114 aa10.14□□□□□ -0.79
CDK4-215ENST00000553237 FOXI1Q12951 378 aa10.14□□□□□ -0.79
CDK4-215ENST00000553237 C10orf91Q5T1B1 145 aa10.14□□□□□ -0.79
CDK4-215ENST00000553237 MRPL52Q86TS9 123 aaKnown RBP10.14□□□□□ -0.79
CDK4-215ENST00000553237 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
CDK4-215ENST00000553237 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
CDK4-215ENST00000553237 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
CDK4-215ENST00000553237 CCL25O15444 150 aa10.13□□□□□ -0.79
CDK4-215ENST00000553237 CDC42SE2Q9NRR3 84 aa10.13□□□□□ -0.79
CDK4-215ENST00000553237 CIRBPQ14011 172 aaKnown RBP10.12□□□□□ -0.79
CDK4-215ENST00000553237 ZNF664Q8N3J9 261 aa10.12□□□□□ -0.79
CDK4-215ENST00000553237 CARHSP1Q9Y2V2 147 aaKnown RBP10.12□□□□□ -0.79
CDK4-215ENST00000553237 A0A087WYN8 130 aa10.11□□□□□ -0.79
CDK4-215ENST00000553237 TCAPO15273 167 aa10.11□□□□□ -0.79
CDK4-215ENST00000553237 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
CDK4-215ENST00000553237 COX6A2Q02221 97 aa10.11□□□□□ -0.79
CDK4-215ENST00000553237 UBE2D4Q9Y2X8 147 aa10.11□□□□□ -0.79
CDK4-215ENST00000553237 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
CDK4-215ENST00000553237 SMAGPQ0VAQ4 97 aa10.1□□□□□ -0.79
CDK4-215ENST00000553237 SS18Q15532 418 aa10.1□□□□□ -0.79
CDK4-215ENST00000553237 PRSS3P2Q8NHM4 247 aa10.1□□□□□ -0.79
CDK4-215ENST00000553237 SPACA4Q8TDM5 124 aa10.1□□□□□ -0.79
CDK4-215ENST00000553237 TMEM18Q96B42 140 aa10.1□□□□□ -0.79
CDK4-215ENST00000553237 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
CDK4-215ENST00000553237 LAMTOR2Q9Y2Q5 125 aa10.1□□□□□ -0.79
CDK4-215ENST00000553237 CSDC2Q9Y534 153 aaKnown RBP10.1□□□□□ -0.79
CDK4-215ENST00000553237 TRAV9-1A0A075B6T8 112 aa10.09□□□□□ -0.79
CDK4-215ENST00000553237 LOC389332A0A1B0GUA5 103 aa10.09□□□□□ -0.79
CDK4-215ENST00000553237 S100PP25815 95 aa10.09□□□□□ -0.79
CDK4-215ENST00000553237 RPS10P5Q9NQ39 176 aa10.09□□□□□ -0.79
CDK4-215ENST00000553237 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
CDK4-215ENST00000553237 IGKV2-24A0A0C4DH68 120 aa10.08□□□□□ -0.8
CDK4-215ENST00000553237 RAB5AP20339 215 aa10.08□□□□□ -0.8
CDK4-215ENST00000553237 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
CDK4-215ENST00000553237 RHEBQ15382 184 aa10.08□□□□□ -0.8
CDK4-215ENST00000553237 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
CDK4-215ENST00000553237 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
CDK4-215ENST00000553237 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
CDK4-215ENST00000553237 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
CDK4-215ENST00000553237 OXTP01178 125 aa10.07□□□□□ -0.8
CDK4-215ENST00000553237 MAJINQ3KP22 176 aa10.07□□□□□ -0.8
CDK4-215ENST00000553237 CD164L2Q6UWJ8 174 aa10.07□□□□□ -0.8
CDK4-215ENST00000553237 Q6ZUT4 128 aa10.07□□□□□ -0.8
CDK4-215ENST00000553237 TIMM21Q9BVV7 248 aa10.07□□□□□ -0.8
CDK4-215ENST00000553237 PLAC8Q9NZF1 115 aa10.06□□□□□ -0.8
CDK4-215ENST00000553237 APOC3P02656 99 aa10.05□□□□□ -0.8
CDK4-215ENST00000553237 KIAA1644Q3SXP7 199 aa10.05□□□□□ -0.8
CDK4-215ENST00000553237 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
CDK4-215ENST00000553237 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
CDK4-215ENST00000553237 Q8N8P6 123 aa10.04□□□□□ -0.8
CDK4-215ENST00000553237 GNB1LQ9BYB4 327 aa10.04□□□□□ -0.8
CDK4-215ENST00000553237 A0A096LNI7 61 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 C1orf196B1AJZ1 125 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms