RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 RAB4AP20338 218 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 RHOHQ15669 191 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 ZNF56Q15929 161 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 COX19Q49B96 90 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 AMN1Q8IY45 258 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 C15orf53Q8NAA6 179 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 RNF185Q96GF1 192 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 PRADC1Q9BSG0 188 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 GNB1LQ9BYB4 327 aa4.38□□□□□ -1.71
DEPDC4-210ENST00000551642 TRBV7-3A0A075B6L6 115 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 TGIF2-C20orf24A0A0A6YYL0 155 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 MT-ND6P03923 174 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 LINC00694P0DN24 101 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 HAMPP81172 84 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 MRPL23Q16540 153 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 MRPL51Q4U2R6 128 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 TMEM136Q6ZRR5 245 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 CBLN2Q8IUK8 224 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 DNAJC30Q96LL9 226 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 NIT2Q9NQR4 276 aa4.37□□□□□ -1.71
DEPDC4-210ENST00000551642 A0A096LPF7 62 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 A0A0J9YY99 117 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 LOC100131303A0A0U1RQF7 123 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 PPP1R17O96001 155 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 PPBPP02775 128 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 PRSS1P07477 247 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 LINC01547P58512 204 aaPredicted RBP4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 GAGE5Q13069 117 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 GAGE6Q13070 117 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 Q9UF83 564 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 ICOSQ9Y6W8 199 aa4.36□□□□□ -1.71
DEPDC4-210ENST00000551642 TRAV26-2A0A0B4J265 109 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 TRBV6-5A0A0K0K1A5 114 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 COLCA2A8K830 154 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 PHOX2AO14813 284 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 APCSP02743 223 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 SRIP30626 198 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 CKS2P33552 79 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 UBE2D3P61077 147 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 UBE2D2P62837 147 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 NEGR1Q7Z3B1 354 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 ORMDL3Q8N138 153 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 ZNRF2Q8NHG8 242 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 LAMTOR2Q9Y2Q5 125 aa4.35□□□□□ -1.71
DEPDC4-210ENST00000551642 D6R8Y8 96 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 SCO1O75880 301 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 RPS10P46783 165 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 KRTAP10-1P60331 282 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 RPL32P62910 135 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 DAZ4Q86SG3 579 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 C6orf223Q8N319 242 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 ATP6V0E2Q8NHE4 81 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 RPL39LQ96EH5 51 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 C20orf78Q9BR46 151 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 DAZ3Q9NR90 486 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 TRAPPC1Q9Y5R8 145 aa4.34□□□□□ -1.71
DEPDC4-210ENST00000551642 TRBV27A0A0K0K1C4 114 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 SMKR1H3BMG3 65 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 NCR2O95944 276 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 RAB5AP20339 215 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 POLR2KP53803 58 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 ESRGQ1W209 222 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 TMEM97Q5BJF2 176 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 LYPD5Q6UWN5 251 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 PRELID3AQ96N28 172 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 TMEM70Q9BUB7 260 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 GTSF1LQ9H1H1 148 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 ST20Q9HBF5 79 aa4.33□□□□□ -1.72
DEPDC4-210ENST00000551642 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 I3L3M4 83 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 VCYO14598 125 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 NPYP01303 97 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 CCL18P55774 89 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 FABP9Q0Z7S8 132 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 ALKBH7Q9BT30 221 aaPredicted RBP4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 UPK3BQ9BT76 320 aa4.32□□□□□ -1.72
DEPDC4-210ENST00000551642 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 K7EMI3 77 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 TCAPO15273 167 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 OXTP01178 125 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 PMCHP20382 165 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 IQCJQ1A5X6 159 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 NTM-AS1Q6ZSK4 140 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 UBE2DNLQ8IWF7 75 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 DEFB104AQ8WTQ1 72 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 LITAFQ99732 161 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 MRPS16Q9Y3D3 137 aaKnown RBP4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 LINC00588Q9Y4M8 146 aa4.31□□□□□ -1.72
DEPDC4-210ENST00000551642 IGHV1-24A0A0C4DH33 117 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 191.4 ms