RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 HINT1P49773 126 aaPredicted RBP13.77□□□□□ -0.21
SSH1-209ENST00000551165 CHAC1Q9BUX1 264 aa13.76□□□□□ -0.21
SSH1-209ENST00000551165 GTSF1LQ9H1H1 148 aa13.76□□□□□ -0.21
SSH1-209ENST00000551165 HTN3P15516 51 aa13.76□□□□□ -0.21
SSH1-209ENST00000551165 TMEM170BQ5T4T1 132 aa13.76□□□□□ -0.21
SSH1-209ENST00000551165 PAX4O43316 350 aa13.75□□□□□ -0.21
SSH1-209ENST00000551165 NFE4Q86UQ8 179 aa13.75□□□□□ -0.21
SSH1-209ENST00000551165 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
SSH1-209ENST00000551165 TMEM243Q9BU79 118 aa13.74□□□□□ -0.21
SSH1-209ENST00000551165 ATP5G1P05496 136 aa13.74□□□□□ -0.21
SSH1-209ENST00000551165 PAPPA-AS1Q5QFB9 102 aa13.74□□□□□ -0.21
SSH1-209ENST00000551165 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
SSH1-209ENST00000551165 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 TRBV6-8A0A0A6YYG3 113 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 F5H768 121 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 TRBV25-1A0A075B6N4 114 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 E9PLD3 99 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 K7EIL1 84 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 DLEU1O43261 78 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 ZNF22P17026 224 aaPredicted RBP13.73□□□□□ -0.21
SSH1-209ENST00000551165 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 TIMM21Q9BVV7 248 aa13.73□□□□□ -0.21
SSH1-209ENST00000551165 GAGE6Q13070 117 aa13.72□□□□□ -0.21
SSH1-209ENST00000551165 MRPL52Q86TS9 123 aaKnown RBP13.72□□□□□ -0.21
SSH1-209ENST00000551165 NPSP0C0P6 89 aa13.71□□□□□ -0.21
SSH1-209ENST00000551165 MRPS36P82909 103 aaKnown RBP13.71□□□□□ -0.21
SSH1-209ENST00000551165 IGHV3-64A0A075B6Q5 118 aa13.71□□□□□ -0.22
SSH1-209ENST00000551165 TSPEAR-AS2P59090 65 aa13.71□□□□□ -0.22
SSH1-209ENST00000551165 SVIPQ8NHG7 77 aa13.71□□□□□ -0.22
SSH1-209ENST00000551165 C2orf88Q9BSF0 95 aa13.71□□□□□ -0.22
SSH1-209ENST00000551165 UBE2L6O14933 153 aa13.7□□□□□ -0.22
SSH1-209ENST00000551165 CDC42SE2Q9NRR3 84 aa13.69□□□□□ -0.22
SSH1-209ENST00000551165 UBE2D1P51668 147 aa13.69□□□□□ -0.22
SSH1-209ENST00000551165 CHCHD5Q9BSY4 110 aa13.69□□□□□ -0.22
SSH1-209ENST00000551165 TMEM223A0PJW6 202 aa13.68□□□□□ -0.22
SSH1-209ENST00000551165 AMMECR1LQ6DCA0 310 aa13.68□□□□□ -0.22
SSH1-209ENST00000551165 MRAPQ8TCY5 172 aa13.68□□□□□ -0.22
SSH1-209ENST00000551165 CSDC2Q9Y534 153 aaKnown RBP13.68□□□□□ -0.22
SSH1-209ENST00000551165 IGLV4-60A0A075B6I1 120 aa13.68□□□□□ -0.22
SSH1-209ENST00000551165 A0A0J9YWU9 116 aa13.68□□□□□ -0.22
SSH1-209ENST00000551165 DEFB121Q5J5C9 76 aa13.68□□□□□ -0.22
SSH1-209ENST00000551165 OR5A1Q8NGJ0 315 aa13.68□□□□□ -0.22
SSH1-209ENST00000551165 COX6A2Q02221 97 aa13.67□□□□□ -0.22
SSH1-209ENST00000551165 TMEM97Q5BJF2 176 aa13.67□□□□□ -0.22
SSH1-209ENST00000551165 A0A1B0GV90 55 aa13.67□□□□□ -0.22
SSH1-209ENST00000551165 BVES-AS1Q5T3Y7 98 aa13.67□□□□□ -0.22
SSH1-209ENST00000551165 TRAV13-1A0A0B4J241 112 aa13.66□□□□□ -0.22
SSH1-209ENST00000551165 SIVA1O15304 175 aa13.66□□□□□ -0.22
SSH1-209ENST00000551165 Q6ZTC4 211 aa13.66□□□□□ -0.22
SSH1-209ENST00000551165 MYMXA0A1B0GTQ4 84 aa13.65□□□□□ -0.22
SSH1-209ENST00000551165 TINCRA0A1B0GVN0 87 aa13.65□□□□□ -0.22
SSH1-209ENST00000551165 TRAV8-3A0A0A6YYJ7 113 aa13.65□□□□□ -0.22
SSH1-209ENST00000551165 HERVK_113P61574 105 aa13.65□□□□□ -0.22
SSH1-209ENST00000551165 LBHQ53QV2 105 aaPredicted RBP13.64□□□□□ -0.23
SSH1-209ENST00000551165 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
SSH1-209ENST00000551165 KPRPQ5T749 579 aaPredicted RBP13.64□□□□□ -0.23
SSH1-209ENST00000551165 PLEKHB2Q96CS7 222 aa13.64□□□□□ -0.23
SSH1-209ENST00000551165 TMEM101Q96IK0 257 aa13.64□□□□□ -0.23
SSH1-209ENST00000551165 C11orf68Q9H3H3 251 aaKnown RBP13.64□□□□□ -0.23
SSH1-209ENST00000551165 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
SSH1-209ENST00000551165 ZNF815PA8K554 130 aa13.63□□□□□ -0.23
SSH1-209ENST00000551165 H7C423 109 aa13.63□□□□□ -0.23
SSH1-209ENST00000551165 NANOS2P60321 138 aaKnown RBP13.63□□□□□ -0.23
SSH1-209ENST00000551165 HUWE1Q7Z6Z7 4374 aaKnown RBP13.62□□□□□ -0.23
SSH1-209ENST00000551165 IGKV3OR2-268A0A0C4DH90 116 aa13.62□□□□□ -0.23
SSH1-209ENST00000551165 SPINK8P0C7L1 97 aa13.62□□□□□ -0.23
SSH1-209ENST00000551165 Q8N3U1 123 aa13.62□□□□□ -0.23
SSH1-209ENST00000551165 GEMIN7Q9H840 131 aaKnown RBP13.62□□□□□ -0.23
SSH1-209ENST00000551165 J3QQQ9 107 aa13.61□□□□□ -0.23
SSH1-209ENST00000551165 Q6ZVH6 145 aa13.61□□□□□ -0.23
SSH1-209ENST00000551165 TEX48A0A1B0GUV7 120 aa13.61□□□□□ -0.23
SSH1-209ENST00000551165 HIGD1BQ9P298 99 aa13.61□□□□□ -0.23
SSH1-209ENST00000551165 TMEM262E9PQX1 116 aa13.6□□□□□ -0.23
SSH1-209ENST00000551165 K7EP13 123 aa13.6□□□□□ -0.23
SSH1-209ENST00000551165 COL5A1-AS1Q5SY13 56 aa13.6□□□□□ -0.23
SSH1-209ENST00000551165 LEPROTO15243 131 aa13.59□□□□□ -0.23
SSH1-209ENST00000551165 IGHV3-30-3P0DP02 117 aa13.59□□□□□ -0.23
SSH1-209ENST00000551165 ZNF25P17030 456 aaPredicted RBP13.59□□□□□ -0.23
SSH1-209ENST00000551165 TM2D3Q9BRN9 247 aa13.59□□□□□ -0.23
SSH1-209ENST00000551165 TIRAPP58753 221 aa13.59□□□□□ -0.23
SSH1-209ENST00000551165 HSD52Q0P140 79 aa13.59□□□□□ -0.23
SSH1-209ENST00000551165 MRPL23Q16540 153 aaKnown RBP13.59□□□□□ -0.23
SSH1-209ENST00000551165 RBX1P62877 108 aa13.58□□□□□ -0.24
SSH1-209ENST00000551165 IGLV5-45A0A087WSX0 123 aa13.58□□□□□ -0.24
SSH1-209ENST00000551165 SMAGPQ0VAQ4 97 aa13.58□□□□□ -0.24
SSH1-209ENST00000551165 ICOSQ9Y6W8 199 aa13.58□□□□□ -0.24
SSH1-209ENST00000551165 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
SSH1-209ENST00000551165 FAM19A3Q7Z5A8 133 aa13.57□□□□□ -0.24
SSH1-209ENST00000551165 C11orf45Q8TAV5 145 aa13.57□□□□□ -0.24
SSH1-209ENST00000551165 SPATA25Q9BR10 227 aa13.57□□□□□ -0.24
SSH1-209ENST00000551165 IGHV1-58A0A0C4DH39 117 aa13.56□□□□□ -0.24
SSH1-209ENST00000551165 SCGB1D4Q6XE38 83 aa13.56□□□□□ -0.24
SSH1-209ENST00000551165 GCSHP23434 173 aa13.55□□□□□ -0.24
SSH1-209ENST00000551165 FXYD2P54710 66 aa13.55□□□□□ -0.24
SSH1-209ENST00000551165 HERVK_113P63121 156 aa13.55□□□□□ -0.24
SSH1-209ENST00000551165 CLPSL2Q6UWE3 100 aa13.55□□□□□ -0.24
SSH1-209ENST00000551165 COL7A1Q02388 2944 aa13.54□□□□□ -0.24
SSH1-209ENST00000551165 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
SSH1-209ENST00000551165 C10orf126Q8N4M7 172 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms