RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SH2D1AO60880 128 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 PMP2P02689 132 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 IFITM1P13164 125 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 DYNLT3P51808 116 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 RPL38P63173 70 aaKnown RBP2.93□□□□□ -1.94
CPSF6-206ENST00000550987 PRB3Q04118 309 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-206ENST00000550987 CLLU1Q5K131 121 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 MRPL54Q6P161 138 aaKnown RBP2.93□□□□□ -1.94
CPSF6-206ENST00000550987 OR8B3Q8NGG8 313 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 AQP10Q96PS8 301 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 OR8B2Q96RD0 313 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 SEC11CQ9BY50 192 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 TXNL4BQ9NX01 149 aaKnown RBP2.93□□□□□ -1.94
CPSF6-206ENST00000550987 SORL1Q92673 2214 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 TRAV12-2A0A075B6T6 113 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 A0A0D9SG52 128 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 ODAMA1E959 279 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 HMGN4O00479 90 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 SYNGR2O43760 224 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 CD2P06729 351 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 RPL27AP46776 148 aaKnown RBP2.92□□□□□ -1.94
CPSF6-206ENST00000550987 RPL30P62888 115 aaKnown RBP2.92□□□□□ -1.94
CPSF6-206ENST00000550987 ZNF90Q03938 601 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 CATR1Q13166 79 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 KLRD1Q13241 179 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 DIAPH2-AS1Q14236 149 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 LINC01554Q52M75 96 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 Q56UQ5 140 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 C10orf91Q5T1B1 145 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 TEN1Q86WV5 123 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 CLECL1Q8IZS7 167 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 OR4B1Q8NGF8 309 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 OR8D4Q8NGM9 314 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 DCANP1Q8TF63 244 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 DPH3Q96FX2 82 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 PRELID3AQ96N28 172 aa2.92□□□□□ -1.94
CPSF6-206ENST00000550987 TANC2Q9HCD6 1990 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 IGKV1D-42A0A075B6H8 117 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 IGKV1D-17A0A075B6S4 117 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 IGKV1D-43A0A0B4J1Z2 117 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 IGKV1-12A0A0C4DH73 117 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 BUB1B-PAK6H3BSN5 160 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 H3BUX3 64 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 GEMIN2O14893 280 aaKnown RBP2.91□□□□□ -1.94
CPSF6-206ENST00000550987 RER1O15258 196 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 SLC25A20O43772 301 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 CPSF4O95639 269 aaKnown RBP2.91□□□□□ -1.94
CPSF6-206ENST00000550987 IGKV1-17P01599 117 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 IGKV1D-12P01611 117 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 TCRAP04437 139 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 NPPCP23582 126 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 CRYBB3P26998 211 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 PYDC2Q56P42 97 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 VMO1Q7Z5L0 202 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 HIST1H2BLQ99880 126 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 FKBP11Q9NYL4 201 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 TP73-AS1Q9UF72 201 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 DNAJC15Q9Y5T4 150 aa2.91□□□□□ -1.94
CPSF6-206ENST00000550987 TRBV20-1A0A075B6N2 111 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 C3orf85A0A1B0GTC6 90 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 TMEM262E9PQX1 116 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 MT-ND6P03923 174 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 CTSDP07339 412 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-206ENST00000550987 CXCL1P09341 107 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 RPL18Q07020 188 aaKnown RBP2.9□□□□□ -1.95
CPSF6-206ENST00000550987 ZNF846Q147U1 533 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 LGALS9BQ3B8N2 356 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 TMEM91Q6ZNR0 172 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 BPIFA4PQ86YQ2 179 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 OR5AS1Q8N127 324 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 HIST3H2BBQ8N257 126 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 Q8N2B8 174 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 DAND5Q8N907 189 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 OR5AK2Q8NH90 309 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 LINC00526Q96FQ7 95 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 ZNF714Q96N38 554 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 NAA38Q9BRA0 125 aaKnown RBP2.9□□□□□ -1.95
CPSF6-206ENST00000550987 VAMP8Q9BV40 100 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 OSTCQ9NRP0 149 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 COMMD3Q9UBI1 195 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 ZNF443Q9Y2A4 671 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-206ENST00000550987 LINC00588Q9Y4M8 146 aa2.9□□□□□ -1.95
CPSF6-206ENST00000550987 IGKV2-24A0A0C4DH68 120 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 A0A1B0GWA3 101 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 TCRBV4S1A1TA0A5B7 111 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 GRIFINA4D1Z8 144 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 NUPR2A6NF83 97 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 RBP4P02753 201 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 FXYD7P58549 80 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 IQCJQ1A5X6 159 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 C9orf153Q5TBE3 101 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 OR2T2Q6IF00 324 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 C7orf65Q6ZTY9 151 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 MIR17HGQ75NE6 70 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 SLC35E3Q7Z769 313 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 LINC00311Q8N616 119 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 OR4X2Q8NGF9 303 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms