RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.81
HDAC7-228ENST00000548938 DEFB121Q5J5C9 76 aa9.96□□□□□ -0.81
HDAC7-228ENST00000548938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.96□□□□□ -0.81
HDAC7-228ENST00000548938 IGHV4-59P01825 116 aa9.96□□□□□ -0.82
HDAC7-228ENST00000548938 CITED2Q99967 270 aaPredicted RBP9.96□□□□□ -0.82
HDAC7-228ENST00000548938 ZANQ9Y493 2812 aa9.95□□□□□ -0.82
HDAC7-228ENST00000548938 B4DSR2 109 aa9.95□□□□□ -0.82
HDAC7-228ENST00000548938 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
HDAC7-228ENST00000548938 RNF152Q8N8N0 203 aa9.95□□□□□ -0.82
HDAC7-228ENST00000548938 TIMM17BO60830 172 aa9.95□□□□□ -0.82
HDAC7-228ENST00000548938 A0A096LNT2 108 aa9.94□□□□□ -0.82
HDAC7-228ENST00000548938 NDUFA1O15239 70 aa9.94□□□□□ -0.82
HDAC7-228ENST00000548938 TMEM101Q96IK0 257 aa9.94□□□□□ -0.82
HDAC7-228ENST00000548938 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
HDAC7-228ENST00000548938 RBMY1BA6NDE4 496 aaKnown RBP9.94□□□□□ -0.82
HDAC7-228ENST00000548938 RBMY1EA6NEQ0 496 aaKnown RBP9.94□□□□□ -0.82
HDAC7-228ENST00000548938 RBMY1DP0C7P1 496 aaKnown RBP9.94□□□□□ -0.82
HDAC7-228ENST00000548938 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
HDAC7-228ENST00000548938 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
HDAC7-228ENST00000548938 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
HDAC7-228ENST00000548938 DEFB131AP59861 70 aa9.93□□□□□ -0.82
HDAC7-228ENST00000548938 KMT2BQ9UMN6 2715 aaPredicted RBP9.93□□□□□ -0.82
HDAC7-228ENST00000548938 TENM4Q6N022 2769 aa9.93□□□□□ -0.82
HDAC7-228ENST00000548938 COX6A2Q02221 97 aa9.92□□□□□ -0.82
HDAC7-228ENST00000548938 MAPK1IP1LQ8NDC0 245 aa9.92□□□□□ -0.82
HDAC7-228ENST00000548938 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
HDAC7-228ENST00000548938 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
HDAC7-228ENST00000548938 Q9H8V8 135 aa9.92□□□□□ -0.82
HDAC7-228ENST00000548938 TRBV7-7A0A0K0K1E9 115 aa9.91□□□□□ -0.82
HDAC7-228ENST00000548938 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
HDAC7-228ENST00000548938 APCP25054 2843 aa9.91□□□□□ -0.82
HDAC7-228ENST00000548938 IGLV5-45A0A087WSX0 123 aa9.91□□□□□ -0.82
HDAC7-228ENST00000548938 ZNF415Q09FC8 603 aa9.91□□□□□ -0.82
HDAC7-228ENST00000548938 CUBNO60494 3623 aa9.91□□□□□ -0.82
HDAC7-228ENST00000548938 Q8N2B8 174 aa9.91□□□□□ -0.82
HDAC7-228ENST00000548938 IGHV3OR16-12A0A075B7B8 117 aa9.9□□□□□ -0.82
HDAC7-228ENST00000548938 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
HDAC7-228ENST00000548938 C3orf56Q8N813 242 aa9.9□□□□□ -0.82
HDAC7-228ENST00000548938 LINC01356Q8N9X3 169 aa9.9□□□□□ -0.82
HDAC7-228ENST00000548938 NBPF19A0A087WUL8 3843 aa9.9□□□□□ -0.83
HDAC7-228ENST00000548938 TIRAPP58753 221 aa9.9□□□□□ -0.83
HDAC7-228ENST00000548938 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.83
HDAC7-228ENST00000548938 COX7A2LO14548 114 aa9.89□□□□□ -0.83
HDAC7-228ENST00000548938 IGHV3-53P01767 116 aa9.89□□□□□ -0.83
HDAC7-228ENST00000548938 DGAT2L7PQ6IED9 249 aa9.89□□□□□ -0.83
HDAC7-228ENST00000548938 HELZ2Q9BYK8 2649 aaKnown RBP9.89□□□□□ -0.83
HDAC7-228ENST00000548938 DEFB113Q30KQ7 82 aa9.89□□□□□ -0.83
HDAC7-228ENST00000548938 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 NDUFA7O95182 113 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 DEFB136Q30KP8 78 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 SMCR5Q8TEV8 140 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 FAM236AA0A1B0GUQ0 79 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 FAM236BA0A1B0GV22 79 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 LINC00242Q5T6M2 205 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 C11orf72Q8NBR9 251 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 VPREB3Q9UKI3 123 aa9.88□□□□□ -0.83
HDAC7-228ENST00000548938 SLURP1P55000 103 aa9.87□□□□□ -0.83
HDAC7-228ENST00000548938 A8MTW9 85 aa9.87□□□□□ -0.83
HDAC7-228ENST00000548938 PIK3CD-AS1Q5SR53 167 aa9.87□□□□□ -0.83
HDAC7-228ENST00000548938 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
HDAC7-228ENST00000548938 C18orf65Q6ZTR6 163 aa9.86□□□□□ -0.83
HDAC7-228ENST00000548938 DNAJC30Q96LL9 226 aa9.86□□□□□ -0.83
HDAC7-228ENST00000548938 LINC01587Q99440 93 aa9.86□□□□□ -0.83
HDAC7-228ENST00000548938 SMIM1B2RUZ4 78 aa9.86□□□□□ -0.83
HDAC7-228ENST00000548938 HERVK_113P63121 156 aa9.86□□□□□ -0.83
HDAC7-228ENST00000548938 CCDC168Q8NDH2 2452 aa9.86□□□□□ -0.83
HDAC7-228ENST00000548938 DAZ2Q13117 558 aaKnown RBP9.85□□□□□ -0.83
HDAC7-228ENST00000548938 C5orf47Q569G3 176 aa9.85□□□□□ -0.83
HDAC7-228ENST00000548938 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
HDAC7-228ENST00000548938 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
HDAC7-228ENST00000548938 MXRA5Q9NR99 2828 aa9.85□□□□□ -0.83
HDAC7-228ENST00000548938 HIST2H2BCQ6DN03 193 aa9.85□□□□□ -0.83
HDAC7-228ENST00000548938 LRRC75A-AS1Q8N1F1 130 aa9.85□□□□□ -0.83
HDAC7-228ENST00000548938 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 ACYP1P07311 99 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 IGHV4-31P0DP07 118 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 PLA2G2AP14555 144 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 BEAN1Q3B7T3 259 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 PRIMA1Q86XR5 153 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 J3QLI3 93 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 RS1O15537 224 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 UBE2E2Q96LR5 201 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 FAM218AQ96MZ4 157 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 TEX15Q9BXT5 2789 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.83
HDAC7-228ENST00000548938 KRTAP1-3Q8IUG1 177 aa9.83□□□□□ -0.84
HDAC7-228ENST00000548938 C22orf24Q9Y442 160 aa9.83□□□□□ -0.84
HDAC7-228ENST00000548938 BAALC-AS2P0C853 105 aa9.83□□□□□ -0.84
HDAC7-228ENST00000548938 Q96MF0 132 aa9.83□□□□□ -0.84
HDAC7-228ENST00000548938 CR1P17927 2039 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 TRAV25A0A0B4J276 109 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 J3QKU1 62 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 MAP6D1Q9H9H5 199 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 ZNF469Q96JG9 3925 aaPredicted RBP9.82□□□□□ -0.84
HDAC7-228ENST00000548938 TRACP01848 142 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 IMUPQ9GZP8 106 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 ZNF702PQ9H963 129 aa9.82□□□□□ -0.84
HDAC7-228ENST00000548938 LINC00643Q86TS7 51 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms