RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GNG7O60262 68 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 YPEL1O60688 119 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 APOC1P02654 83 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 CXCL8P10145 99 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 COX6B1P14854 86 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 C1orf137Q5JT78 98 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 TEX261Q6UWH6 196 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 COA5Q86WW8 74 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 GKN2Q86XP6 184 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 Q96M85 177 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 METTL1Q9UBP6 276 aaKnown RBP2.06□□□□□ -2.08
SCAF11-210ENST00000547654 CDC42EP2O14613 210 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 DLEU1O43261 78 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 CCL4P13236 92 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 GUCA1AP43080 201 aaPredicted RBP2.05□□□□□ -2.08
SCAF11-210ENST00000547654 EMX2Q04743 252 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 WHAMMP3Q1A5X7 153 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 CLLU1Q5K131 121 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 OR5AS1Q8N127 324 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 SMIM7Q9BQ49 75 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 DNAJC15Q9Y5T4 150 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 CHCHD2Q9Y6H1 151 aaPredicted RBP2.05□□□□□ -2.08
SCAF11-210ENST00000547654 U3KQA8 63 aa2.05□□□□□ -2.08
SCAF11-210ENST00000547654 DNAH7Q8WXX0 4024 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 PLECQ15149 4684 aaKnown RBP2.04□□□□□ -2.08
SCAF11-210ENST00000547654 IGHV1-24A0A0C4DH33 117 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 FAM236AA0A1B0GUQ0 79 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 FAM236BA0A1B0GV22 79 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 HYPMO75409 117 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 ABCA1O95477 2261 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 CD14P08571 375 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 S100A1P23297 94 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 ASB16-AS1Q495Z4 193 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 IZUMO2Q6UXV1 221 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 DNAH3Q8TD57 4116 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 PSMF1Q92530 271 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 C2orf88Q9BSF0 95 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 SAR1AQ9NR31 198 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 MPC1Q9Y5U8 109 aa2.04□□□□□ -2.08
SCAF11-210ENST00000547654 TRBV6-8A0A0A6YYG3 113 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 C9orf170A2RU37 121 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 LINC00587B1AMM8 73 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 ZNF670-ZNF695F2Z2N8 137 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 CNBPP62633 177 aaKnown RBP2.03□□□□□ -2.08
SCAF11-210ENST00000547654 CASC2Q6XLA1 102 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 ATOH7Q8N100 152 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 OTOSQ8NHW6 89 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 TMEM203Q969S6 136 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 CIB3Q96Q77 187 aaPredicted RBP2.03□□□□□ -2.08
SCAF11-210ENST00000547654 TMEM191AQ9H0A3 160 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 SLC35B3Q9H1N7 401 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 SOX21Q9Y651 276 aaPredicted RBP2.03□□□□□ -2.08
SCAF11-210ENST00000547654 STARD9Q9P2P6 4700 aa2.03□□□□□ -2.08
SCAF11-210ENST00000547654 ROS1P08922 2347 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 STAB2Q8WWQ8 2551 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 TRBV6-5A0A0K0K1A5 114 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 IFITM5A6NNB3 132 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 ZNF736B4DX44 427 aaPredicted RBP2.02□□□□□ -2.09
SCAF11-210ENST00000547654 F8W1H4 67 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 EDF1O60869 148 aaKnown RBP2.02□□□□□ -2.09
SCAF11-210ENST00000547654 CD3DP04234 171 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 FAM74A1Q5RGS3 127 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 ZNF833PQ6ZTB9 187 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 LINC00269Q8N2A0 174 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 OR10AG1Q8NH19 301 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 Q8TAT8 98 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 TMEM106BQ9NUM4 274 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 CCDC167Q9P0B6 97 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 KLK9Q9UKQ9 250 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 MUC2Q02817 5179 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 MPDZO75970 2070 aa2.02□□□□□ -2.09
SCAF11-210ENST00000547654 CCDC88CQ9P219 2028 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 TCHHQ07283 1943 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 TRBV20-1A0A075B6N2 111 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 A0A0G2JMM0 328 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 A0A1W2PPB8 328 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 BBIP1A8MTZ0 92 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 KIR3DP1A8MWS1 328 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 PYYP10082 97 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 PLGLB1Q02325 96 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 C10orf55Q5SWW7 151 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 FOXI2Q6ZQN5 318 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 ORMDL1Q9P0S3 153 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 DNAH10Q8IVF4 4471 aa2.01□□□□□ -2.09
SCAF11-210ENST00000547654 DYNC1H1Q14204 4646 aaKnown RBP2□□□□□ -2.09
SCAF11-210ENST00000547654 NCKAP5O14513 1909 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 TRGV2A0A075B6R0 118 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 C10orf142B7Z368 130 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 DEFB109BQ30KR1 87 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 CCSMST1Q4G0I0 132 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 FAM19A2Q8N3H0 131 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 KCNRGQ8N5I3 272 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 C5orf17Q8NAS9 161 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 PSMG3Q9BT73 122 aaPredicted RBP2□□□□□ -2.09
SCAF11-210ENST00000547654 REG4Q9BYZ8 158 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 GNG8Q9UK08 70 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 LSM2Q9Y333 95 aaKnown RBP2□□□□□ -2.09
SCAF11-210ENST00000547654 MUC4Q99102 2169 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 277 ms