RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
ATXN2-216ENST00000546483 FAM19A3Q7Z5A8 133 aa8.87□□□□□ -0.99
ATXN2-216ENST00000546483 UNC79Q9P2D8 2635 aa8.87□□□□□ -0.99
ATXN2-216ENST00000546483 K7EQG2 157 aa8.87□□□□□ -0.99
ATXN2-216ENST00000546483 CRYGAP11844 174 aa8.87□□□□□ -0.99
ATXN2-216ENST00000546483 RPS28P62857 69 aaKnown RBP8.87□□□□□ -0.99
ATXN2-216ENST00000546483 NAV2Q8IVL1 2488 aa8.86□□□□□ -0.99
ATXN2-216ENST00000546483 INAFM2P0DMQ5 153 aa8.86□□□□□ -0.99
ATXN2-216ENST00000546483 COX7CP15954 63 aa8.86□□□□□ -0.99
ATXN2-216ENST00000546483 KRTAP10-9P60411 292 aa8.86□□□□□ -0.99
ATXN2-216ENST00000546483 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
ATXN2-216ENST00000546483 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
ATXN2-216ENST00000546483 MAP1AP78559 2803 aaPredicted RBP8.86□□□□□ -0.99
ATXN2-216ENST00000546483 TRAV12-2A0A075B6T6 113 aa8.85□□□□□ -0.99
ATXN2-216ENST00000546483 A6NDX4 124 aa8.85□□□□□ -0.99
ATXN2-216ENST00000546483 A8MZ25 164 aa8.85□□□□□ -0.99
ATXN2-216ENST00000546483 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
ATXN2-216ENST00000546483 ATP5J2P56134 94 aa8.85□□□□□ -0.99
ATXN2-216ENST00000546483 ASH1LQ9NR48 2969 aaKnown RBP8.85□□□□□ -0.99
ATXN2-216ENST00000546483 NPC2P61916 151 aa8.85□□□□□ -0.99
ATXN2-216ENST00000546483 DAZ2Q13117 558 aaKnown RBP8.85□□□□□ -0.99
ATXN2-216ENST00000546483 DAZ4Q86SG3 579 aaKnown RBP8.85□□□□□ -0.99
ATXN2-216ENST00000546483 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
ATXN2-216ENST00000546483 DAZ3Q9NR90 486 aaKnown RBP8.85□□□□□ -0.99
ATXN2-216ENST00000546483 CSMD2Q7Z408 3487 aa8.84□□□□□ -0.99
ATXN2-216ENST00000546483 HERVK_113P63121 156 aa8.84□□□□□ -0.99
ATXN2-216ENST00000546483 ZNF415Q09FC8 603 aa8.84□□□□□ -0.99
ATXN2-216ENST00000546483 DUX5Q96PT3 197 aa8.84□□□□□ -0.99
ATXN2-216ENST00000546483 CDKN2A-AS1Q9UH64 79 aa8.84□□□□□ -0.99
ATXN2-216ENST00000546483 ITPR2Q14571 2701 aa8.84□□□□□ -0.99
ATXN2-216ENST00000546483 VPS13CQ709C8 3753 aa8.84□□□□□ -0.99
ATXN2-216ENST00000546483 CSDC2Q9Y534 153 aaKnown RBP8.84□□□□□ -0.99
ATXN2-216ENST00000546483 A8MTW9 85 aa8.83□□□□□ -1
ATXN2-216ENST00000546483 J3KT08 172 aa8.83□□□□□ -1
ATXN2-216ENST00000546483 EDN2P20800 178 aa8.83□□□□□ -1
ATXN2-216ENST00000546483 SPINK13Q1W4C9 94 aa8.83□□□□□ -1
ATXN2-216ENST00000546483 BPESC1Q9GZL8 116 aa8.83□□□□□ -1
ATXN2-216ENST00000546483 ATOX1O00244 68 aa8.82□□□□□ -1
ATXN2-216ENST00000546483 BAALC-AS2P0C853 105 aa8.82□□□□□ -1
ATXN2-216ENST00000546483 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
ATXN2-216ENST00000546483 LINC00467Q9BRT7 94 aa8.82□□□□□ -1
ATXN2-216ENST00000546483 IGHV3OR16-10A0A075B7F0 116 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 TMEM89A2RUT3 159 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 SOSTDC1Q6X4U4 206 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 Q8N2B8 174 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.81□□□□□ -1
ATXN2-216ENST00000546483 C3orf56Q8N813 242 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 PIMREGQ9BSJ6 248 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 DSCR9P59020 149 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 DEFB113Q30KQ7 82 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 ZNF625Q96I27 306 aaPredicted RBP8.81□□□□□ -1
ATXN2-216ENST00000546483 Q9H8V8 135 aa8.81□□□□□ -1
ATXN2-216ENST00000546483 IGHV3-53P01767 116 aa8.8□□□□□ -1
ATXN2-216ENST00000546483 PROK1P58294 105 aa8.8□□□□□ -1
ATXN2-216ENST00000546483 C5orf47Q569G3 176 aa8.8□□□□□ -1
ATXN2-216ENST00000546483 C10orf105Q8TEF2 133 aa8.8□□□□□ -1
ATXN2-216ENST00000546483 OVOL2Q9BRP0 275 aa8.8□□□□□ -1
ATXN2-216ENST00000546483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.79□□□□□ -1
ATXN2-216ENST00000546483 IGKV2-29A2NJV5 120 aaPredicted RBP8.79□□□□□ -1
ATXN2-216ENST00000546483 RBMY1A1P0DJD3 496 aaKnown RBP8.79□□□□□ -1
ATXN2-216ENST00000546483 RBMY1CP0DJD4 496 aa8.79□□□□□ -1
ATXN2-216ENST00000546483 PSMB8P28062 276 aa8.79□□□□□ -1
ATXN2-216ENST00000546483 RPL28P46779 137 aaKnown RBP8.79□□□□□ -1
ATXN2-216ENST00000546483 RBMY1FQ15415 496 aaKnown RBP8.79□□□□□ -1
ATXN2-216ENST00000546483 IGKV3-20P01619 116 aa8.79□□□□□ -1
ATXN2-216ENST00000546483 BLCAPP62952 87 aa8.79□□□□□ -1
ATXN2-216ENST00000546483 HIST2H2BDQ6DRA6 164 aa8.79□□□□□ -1
ATXN2-216ENST00000546483 IGHV3OR16-12A0A075B7B8 117 aa8.78□□□□□ -1
ATXN2-216ENST00000546483 SMIM1B2RUZ4 78 aa8.78□□□□□ -1
ATXN2-216ENST00000546483 LINC00242Q5T6M2 205 aa8.78□□□□□ -1
ATXN2-216ENST00000546483 Q6ZSN1 163 aa8.78□□□□□ -1
ATXN2-216ENST00000546483 OBSCN-AS1Q96MR7 158 aa8.78□□□□□ -1
ATXN2-216ENST00000546483 CCDC168Q8NDH2 2452 aa8.78□□□□□ -1
ATXN2-216ENST00000546483 IGHV4-30-2A0A087WSY4 118 aa8.77□□□□□ -1
ATXN2-216ENST00000546483 H3BUX3 64 aa8.77□□□□□ -1
ATXN2-216ENST00000546483 MALP21145 153 aa8.77□□□□□ -1
ATXN2-216ENST00000546483 COX6A2Q02221 97 aa8.77□□□□□ -1
ATXN2-216ENST00000546483 BRD3OSQ6XYD6 125 aa8.77□□□□□ -1
ATXN2-216ENST00000546483 FAM218AQ96MZ4 157 aa8.77□□□□□ -1
ATXN2-216ENST00000546483 PDZD2O15018 2839 aa8.77□□□□□ -1.01
ATXN2-216ENST00000546483 GAGE2AQ6NT46 116 aa8.77□□□□□ -1.01
ATXN2-216ENST00000546483 MED13LQ71F56 2210 aa8.76□□□□□ -1.01
ATXN2-216ENST00000546483 IGHV3-73A0A0B4J1V6 119 aa8.76□□□□□ -1.01
ATXN2-216ENST00000546483 TRAV13-2A0A0B4J235 113 aa8.76□□□□□ -1.01
ATXN2-216ENST00000546483 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
ATXN2-216ENST00000546483 LY6EQ16553 131 aa8.76□□□□□ -1.01
ATXN2-216ENST00000546483 Q6JHZ5 121 aa8.76□□□□□ -1.01
ATXN2-216ENST00000546483 Q9UF83 564 aa8.76□□□□□ -1.01
ATXN2-216ENST00000546483 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
ATXN2-216ENST00000546483 SMIM9A6NGZ8 99 aa8.76□□□□□ -1.01
ATXN2-216ENST00000546483 NOTCH2Q04721 2471 aa8.75□□□□□ -1.01
ATXN2-216ENST00000546483 IGHV4-61A0A0C4DH41 118 aa8.75□□□□□ -1.01
ATXN2-216ENST00000546483 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
ATXN2-216ENST00000546483 TMEM258P61165 79 aa8.75□□□□□ -1.01
ATXN2-216ENST00000546483 FAM19A5Q7Z5A7 132 aaPredicted RBP8.75□□□□□ -1.01
ATXN2-216ENST00000546483 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
ATXN2-216ENST00000546483 F5H768 121 aa8.74□□□□□ -1.01
ATXN2-216ENST00000546483 RS1O15537 224 aa8.74□□□□□ -1.01
ATXN2-216ENST00000546483 WIPF1O43516 503 aa8.74□□□□□ -1.01
ATXN2-216ENST00000546483 PRIMA1Q86XR5 153 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms