RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 A8MZ25 164 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 H7C2G1 150 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 IGKV3-20P01619 116 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 CXCL5P42830 114 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 LY6DQ14210 128 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 ADAMTSL4-AS1Q5T5F5 129 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 LINC00643Q86TS7 51 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 DYNLRB2Q8TF09 96 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 Q96MF0 132 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 LINC01587Q99440 93 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 IGHV3-64A0A075B6Q5 118 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 TRAV8-3A0A0A6YYJ7 113 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 TEX49A0A1B0GTD5 131 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 RBMY1A1P0DJD3 496 aaKnown RBP4.65□□□□□ -1.67
SNHG1-225ENST00000545920 RBMY1CP0DJD4 496 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 RBMY1FQ15415 496 aaKnown RBP4.65□□□□□ -1.67
SNHG1-225ENST00000545920 SDIM1Q6ZPB5 146 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 LRRC75A-AS1Q8N1F1 130 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 ZNF625Q96I27 306 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-225ENST00000545920 TMEM126AQ9H061 195 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 MAP6D1Q9H9H5 199 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 CDKN2A-AS1Q9UH64 79 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 NBEAQ8NFP9 2946 aa4.65□□□□□ -1.67
SNHG1-225ENST00000545920 PRRC2CQ9Y520 2896 aaKnown RBP4.64□□□□□ -1.67
SNHG1-225ENST00000545920 KNCNA6PVL3 124 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 SMIM1B2RUZ4 78 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 H0YGX0 51 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 K7EQD1 137 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 EDN2P20800 178 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 RPL28P46779 137 aaKnown RBP4.64□□□□□ -1.67
SNHG1-225ENST00000545920 DEFB114Q30KQ6 69 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 LINC00242Q5T6M2 205 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 LINC01561Q8N1V8 128 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 Q9H8V8 135 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 DSPP15924 2871 aaKnown RBP4.64□□□□□ -1.67
SNHG1-225ENST00000545920 ZNF292O60281 2723 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 DMDP11532 3685 aa4.64□□□□□ -1.67
SNHG1-225ENST00000545920 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-225ENST00000545920 IGHV3OR16-12A0A075B7B8 117 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 A0A1B0GX51 115 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 IGKV2-29A2NJV5 120 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-225ENST00000545920 RBMY1BA6NDE4 496 aaKnown RBP4.63□□□□□ -1.67
SNHG1-225ENST00000545920 RBMY1EA6NEQ0 496 aaKnown RBP4.63□□□□□ -1.67
SNHG1-225ENST00000545920 TGFAP01135 160 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 RBMY1DP0C7P1 496 aaKnown RBP4.63□□□□□ -1.67
SNHG1-225ENST00000545920 NHLRC4P0CG21 123 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-225ENST00000545920 MEIG1Q5JSS6 88 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 HIST2H2BCQ6DN03 193 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 HIST2H2BDQ6DRA6 164 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 CITED2Q99967 270 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-225ENST00000545920 TMEM243Q9BU79 118 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 CDC42SE2Q9NRR3 84 aa4.63□□□□□ -1.67
SNHG1-225ENST00000545920 CELSR3Q9NYQ7 3312 aa4.62□□□□□ -1.67
SNHG1-225ENST00000545920 TRBV6-4A0A1B0GX49 114 aa4.62□□□□□ -1.67
SNHG1-225ENST00000545920 F5H768 121 aa4.62□□□□□ -1.67
SNHG1-225ENST00000545920 PRIMA1Q86XR5 153 aa4.62□□□□□ -1.67
SNHG1-225ENST00000545920 STHQ8IWL8 128 aa4.62□□□□□ -1.67
SNHG1-225ENST00000545920 LINC00476Q8WZB0 136 aa4.62□□□□□ -1.67
SNHG1-225ENST00000545920 C16orf74Q96GX8 76 aa4.62□□□□□ -1.67
SNHG1-225ENST00000545920 BBC3Q96PG8 261 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-225ENST00000545920 IGHV3-73A0A0B4J1V6 119 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 IBA57-AS1B1ANH7 110 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 UBE2L6O14933 153 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 CRLF1O75462 422 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 CRPP02741 224 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-225ENST00000545920 MUC7Q8TAX7 377 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 CLEC2BQ92478 149 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 COL6A3P12111 3177 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 MUC6Q6W4X9 2439 aa4.61□□□□□ -1.67
SNHG1-225ENST00000545920 BAALC-AS2P0C853 105 aa4.6□□□□□ -1.67
SNHG1-225ENST00000545920 IGHV4-31P0DP07 118 aa4.6□□□□□ -1.67
SNHG1-225ENST00000545920 HTN1P15515 57 aa4.6□□□□□ -1.67
SNHG1-225ENST00000545920 PROK1P58294 105 aa4.6□□□□□ -1.67
SNHG1-225ENST00000545920 C10orf99Q6UWK7 81 aa4.6□□□□□ -1.67
SNHG1-225ENST00000545920 ZFHX2Q9C0A1 2572 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-225ENST00000545920 TRGV1A0A0A0MS02 117 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 H3BQ85 93 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 LOC400499M0QZD8 3231 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 UQCRQO14949 82 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 DNAL4O96015 105 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 COX6A2Q02221 97 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 ODF3L2Q3SX64 289 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 RNASE13Q5GAN3 156 aaKnown RBP4.59□□□□□ -1.67
SNHG1-225ENST00000545920 S100A7L2Q5SY68 101 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 C5orf38Q86SI9 138 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 C1orf158Q8N1D5 194 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 COX7B2Q8TF08 81 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 DEFB104AQ8WTQ1 72 aa4.59□□□□□ -1.67
SNHG1-225ENST00000545920 SPTBN2O15020 2390 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 WDFY4Q6ZS81 3184 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 ZZEF1O43149 2961 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 PIEZO2Q9H5I5 2752 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 A0A087WZ39 114 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 ATOX1O00244 68 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 ATP5EP2Q5VTU8 51 aa4.58□□□□□ -1.68
SNHG1-225ENST00000545920 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-225ENST00000545920 OBSCN-AS1Q96MR7 158 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms