RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-233ENST00000545720 CT83Q5H943 113 aa14.87□□□□□ -0.03
RAP1B-233ENST00000545720 ALKAL2Q6UX46 152 aa14.87□□□□□ -0.03
RAP1B-233ENST00000545720 LINC00474Q9P2X8 69 aa14.86□□□□□ -0.03
RAP1B-233ENST00000545720 BLOC1S1P78537 153 aa14.85□□□□□ -0.03
RAP1B-233ENST00000545720 SS18Q15532 418 aa14.85□□□□□ -0.03
RAP1B-233ENST00000545720 LINC01600Q96MT4 127 aa14.85□□□□□ -0.03
RAP1B-233ENST00000545720 PKIGQ9Y2B9 76 aa14.85□□□□□ -0.03
RAP1B-233ENST00000545720 A0A1B0GUT8 65 aa14.84□□□□□ -0.03
RAP1B-233ENST00000545720 HIGD1CA8MV81 97 aa14.84□□□□□ -0.03
RAP1B-233ENST00000545720 MRPL52Q86TS9 123 aaKnown RBP14.83□□□□□ -0.04
RAP1B-233ENST00000545720 TMEM191AQ9H0A3 160 aa14.83□□□□□ -0.04
RAP1B-233ENST00000545720 CDC42SE2Q9NRR3 84 aa14.83□□□□□ -0.04
RAP1B-233ENST00000545720 C7orf77A4D0Y5 90 aa14.82□□□□□ -0.04
RAP1B-233ENST00000545720 ZNF561-AS1K7EIQ3 104 aa14.82□□□□□ -0.04
RAP1B-233ENST00000545720 POLR2KP53803 58 aaKnown RBP14.82□□□□□ -0.04
RAP1B-233ENST00000545720 CD164L2Q6UWJ8 174 aa14.82□□□□□ -0.04
RAP1B-233ENST00000545720 ZNF664Q8N3J9 261 aa14.82□□□□□ -0.04
RAP1B-233ENST00000545720 TSKUQ8WUA8 353 aa14.82□□□□□ -0.04
RAP1B-233ENST00000545720 SMIM7Q9BQ49 75 aa14.82□□□□□ -0.04
RAP1B-233ENST00000545720 TRBV27A0A0K0K1C4 114 aa14.81□□□□□ -0.04
RAP1B-233ENST00000545720 RAB4AP20338 218 aa14.81□□□□□ -0.04
RAP1B-233ENST00000545720 SYCNQ0VAF6 134 aa14.81□□□□□ -0.04
RAP1B-233ENST00000545720 ODF1Q14990 250 aa14.81□□□□□ -0.04
RAP1B-233ENST00000545720 AMN1Q8IY45 258 aa14.81□□□□□ -0.04
RAP1B-233ENST00000545720 FAM210AQ96ND0 272 aa14.81□□□□□ -0.04
RAP1B-233ENST00000545720 LINC01551Q86U37 167 aa14.8□□□□□ -0.04
RAP1B-233ENST00000545720 SMKR1H3BMG3 65 aa14.78□□□□□ -0.04
RAP1B-233ENST00000545720 CAMPP49913 170 aa14.78□□□□□ -0.04
RAP1B-233ENST00000545720 EIF5A2Q9GZV4 153 aaKnown RBP14.78□□□□□ -0.04
RAP1B-233ENST00000545720 LRP2P98164 4655 aa14.77□□□□□ -0.04
RAP1B-233ENST00000545720 FCER1GP30273 86 aa14.77□□□□□ -0.05
RAP1B-233ENST00000545720 SPINK6Q6UWN8 80 aa14.77□□□□□ -0.05
RAP1B-233ENST00000545720 A0A0J9YXV3 536 aa14.76□□□□□ -0.05
RAP1B-233ENST00000545720 ZNF727A8MUV8 499 aa14.76□□□□□ -0.05
RAP1B-233ENST00000545720 MALP21145 153 aa14.76□□□□□ -0.05
RAP1B-233ENST00000545720 PTTG1IPP53801 180 aa14.76□□□□□ -0.05
RAP1B-233ENST00000545720 REG3GQ6UW15 175 aa14.76□□□□□ -0.05
RAP1B-233ENST00000545720 AKAP14Q86UN6 197 aa14.76□□□□□ -0.05
RAP1B-233ENST00000545720 OSTCQ9NRP0 149 aa14.76□□□□□ -0.05
RAP1B-233ENST00000545720 IGLV4-69A0A075B6H9 119 aa14.75□□□□□ -0.05
RAP1B-233ENST00000545720 GAGE2BQ13066 116 aa14.75□□□□□ -0.05
RAP1B-233ENST00000545720 RNASE13Q5GAN3 156 aaKnown RBP14.75□□□□□ -0.05
RAP1B-233ENST00000545720 Q6ZRP5 223 aa14.75□□□□□ -0.05
RAP1B-233ENST00000545720 ISOC2Q96AB3 205 aa14.75□□□□□ -0.05
RAP1B-233ENST00000545720 LOC107984640A0A0U1RRK4 108 aa14.74□□□□□ -0.05
RAP1B-233ENST00000545720 C1orf196B1AJZ1 125 aa14.74□□□□□ -0.05
RAP1B-233ENST00000545720 COX7A2LO14548 114 aa14.74□□□□□ -0.05
RAP1B-233ENST00000545720 VCYO14598 125 aa14.74□□□□□ -0.05
RAP1B-233ENST00000545720 RIGQ13278 110 aa14.73□□□□□ -0.05
RAP1B-233ENST00000545720 NRACQ8N912 160 aa14.73□□□□□ -0.05
RAP1B-233ENST00000545720 UBE2D4Q9Y2X8 147 aa14.73□□□□□ -0.05
RAP1B-233ENST00000545720 SUMO2P61956 95 aaKnown RBP14.72□□□□□ -0.05
RAP1B-233ENST00000545720 NUP35Q8NFH5 326 aa14.72□□□□□ -0.05
RAP1B-233ENST00000545720 V9GYV3 84 aa14.72□□□□□ -0.05
RAP1B-233ENST00000545720 TRAV13-1A0A0B4J241 112 aa14.71□□□□□ -0.05
RAP1B-233ENST00000545720 SRP19P09132 144 aaKnown RBP14.71□□□□□ -0.05
RAP1B-233ENST00000545720 SRSF9Q13242 221 aaKnown RBP eCLIP14.71□□□□□ -0.05
RAP1B-233ENST00000545720 CAMK2N2Q96S95 79 aa14.71□□□□□ -0.05
RAP1B-233ENST00000545720 KIR2DL4Q99706 377 aa14.71□□□□□ -0.05
RAP1B-233ENST00000545720 CSDC2Q9Y534 153 aaKnown RBP14.71□□□□□ -0.05
RAP1B-233ENST00000545720 hCG_2014768A0A024R1R8 64 aa14.7□□□□□ -0.06
RAP1B-233ENST00000545720 PPP1R17O96001 155 aa14.7□□□□□ -0.06
RAP1B-233ENST00000545720 KRTAP10-8P60410 259 aa14.7□□□□□ -0.06
RAP1B-233ENST00000545720 SMAGPQ0VAQ4 97 aa14.7□□□□□ -0.06
RAP1B-233ENST00000545720 Q6ZUT4 128 aa14.69□□□□□ -0.06
RAP1B-233ENST00000545720 A0A1W2PNN7 141 aa14.68□□□□□ -0.06
RAP1B-233ENST00000545720 APOMO95445 188 aa14.68□□□□□ -0.06
RAP1B-233ENST00000545720 C5orf38Q86SI9 138 aa14.68□□□□□ -0.06
RAP1B-233ENST00000545720 PPP1R2P9O14990 202 aa14.66□□□□□ -0.06
RAP1B-233ENST00000545720 RPL18AQ02543 176 aaKnown RBP14.66□□□□□ -0.06
RAP1B-233ENST00000545720 MRPL51Q4U2R6 128 aaKnown RBP14.66□□□□□ -0.06
RAP1B-233ENST00000545720 NAT8BQ9UHF3 227 aa14.66□□□□□ -0.06
RAP1B-233ENST00000545720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.65□□□□□ -0.06
RAP1B-233ENST00000545720 C2orf48Q96LS8 159 aa14.65□□□□□ -0.06
RAP1B-233ENST00000545720 SPAG11BQ08648 103 aa14.64□□□□□ -0.07
RAP1B-233ENST00000545720 C9orf116Q5BN46 136 aaPredicted RBP14.64□□□□□ -0.07
RAP1B-233ENST00000545720 FAM104BQ5XKR9 115 aa14.64□□□□□ -0.07
RAP1B-233ENST00000545720 TMEM18Q96B42 140 aa14.64□□□□□ -0.07
RAP1B-233ENST00000545720 TIMM21Q9BVV7 248 aa14.64□□□□□ -0.07
RAP1B-233ENST00000545720 RPL23P62829 140 aaKnown RBP14.63□□□□□ -0.07
RAP1B-233ENST00000545720 TMEM241Q24JQ0 296 aa14.63□□□□□ -0.07
RAP1B-233ENST00000545720 OPRPNQ99935 248 aaPredicted RBP14.63□□□□□ -0.07
RAP1B-233ENST00000545720 ADIRFQ15847 76 aa14.62□□□□□ -0.07
RAP1B-233ENST00000545720 PSORS1C2Q9UIG4 136 aa14.62□□□□□ -0.07
RAP1B-233ENST00000545720 MT-ND6P03923 174 aa14.61□□□□□ -0.07
RAP1B-233ENST00000545720 RPL39P62891 51 aaKnown RBP14.61□□□□□ -0.07
RAP1B-233ENST00000545720 FAM74A3Q4VXF1 159 aa14.6□□□□□ -0.07
RAP1B-233ENST00000545720 C20orf78Q9BR46 151 aa14.6□□□□□ -0.07
RAP1B-233ENST00000545720 RNF213Q63HN8 5207 aa14.59□□□□□ -0.07
RAP1B-233ENST00000545720 SMIM27A0A1W2PRY6 76 aa14.59□□□□□ -0.07
RAP1B-233ENST00000545720 LINC00862A6NCI5 91 aa14.59□□□□□ -0.07
RAP1B-233ENST00000545720 CKS2P33552 79 aa14.59□□□□□ -0.07
RAP1B-233ENST00000545720 PHF5AQ7RTV0 110 aaKnown RBP14.59□□□□□ -0.07
RAP1B-233ENST00000545720 TRBV24-1A0A075B6N3 115 aa14.58□□□□□ -0.08
RAP1B-233ENST00000545720 OR10D4PQ8NGN7 298 aa14.58□□□□□ -0.08
RAP1B-233ENST00000545720 ORAOV1Q8WV07 137 aa14.58□□□□□ -0.08
RAP1B-233ENST00000545720 TNFRSF6BO95407 300 aa14.57□□□□□ -0.08
RAP1B-233ENST00000545720 RPL32P62910 135 aaKnown RBP14.57□□□□□ -0.08
RAP1B-233ENST00000545720 C1orf137Q5JT78 98 aa14.57□□□□□ -0.08
RAP1B-233ENST00000545720 NAT8Q9UHE5 227 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms