RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 LPAR6P43657 344 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 TAS2R20P59543 309 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 DEFB1P60022 68 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 VSTM2AQ8TAG5 236 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 DERL1Q9BUN8 251 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 TMEM14BQ9NUH8 114 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 APLNQ9ULZ1 77 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 FUT9Q9Y231 359 aa1.76□□□□□ -2.13
SCFD1-207ENST00000544052 IGKV3-7A0A075B6H7 116 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 G3V3Q6 166 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 H7BYZ3 331 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 NDUFA4O00483 81 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 PRM2P04554 102 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 TRAPPC2P0DI81 140 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 TRAPPC2BP0DI82 140 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H1BP16401 226 aaKnown RBP1.75□□□□□ -2.13
SCFD1-207ENST00000544052 CSN1S1P47710 185 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 NCS1P62166 190 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 LSM3P62310 102 aaKnown RBP1.75□□□□□ -2.13
SCFD1-207ENST00000544052 NEDD8Q15843 81 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 TOMM20LQ6UXN7 152 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 ZNF767PQ75MW2 155 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 LHFPL1Q86WI0 220 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 MBD3L1Q8WWY6 194 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 LSM10Q969L4 123 aaKnown RBP1.75□□□□□ -2.13
SCFD1-207ENST00000544052 TOMM6Q96B49 74 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 TP53RKQ96S44 253 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 RHPN1-AS1Q9BWJ2 59 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HERC1Q15751 4861 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 NUPR2A6NF83 97 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 SLC17A3O00476 420 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 CREBL2O60519 120 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-207ENST00000544052 MRPS14O60783 128 aaKnown RBP1.75□□□□□ -2.13
SCFD1-207ENST00000544052 DEFA4P12838 97 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H2BOP23527 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H2BBP33778 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H2BDP58876 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 DEFB131AP59861 70 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 CKS1BP61024 79 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H2BCP62807 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 PRCDQ00LT1 54 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST2H2BEQ16778 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-207ENST00000544052 GDF5OSQ5U4N7 250 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 BPIFA4PQ86YQ2 179 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H2BHQ93079 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 PLEKHB2Q96CS7 222 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H2BNQ99877 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 HIST1H2BMQ99879 126 aa1.75□□□□□ -2.13
SCFD1-207ENST00000544052 KLK5Q9Y337 293 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-207ENST00000544052 ATP6V0CP27449 155 aa1.74□□□□□ -2.13
SCFD1-207ENST00000544052 CATR1Q13166 79 aa1.74□□□□□ -2.13
SCFD1-207ENST00000544052 Q56UQ5 140 aa1.74□□□□□ -2.13
SCFD1-207ENST00000544052 C2orf91Q6ZV80 131 aa1.74□□□□□ -2.13
SCFD1-207ENST00000544052 KTN1-AS1Q86SY8 53 aa1.74□□□□□ -2.13
SCFD1-207ENST00000544052 SNX29P2Q8IUI4 249 aa1.74□□□□□ -2.13
SCFD1-207ENST00000544052 FAT1Q14517 4588 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 TRBV19A0A075B6N1 114 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 CD3DP04234 171 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 IGLC1P0CG04 106 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 ETV6P41212 452 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 MEF2BQ02080 365 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-207ENST00000544052 LCA10Q71F78 164 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 C20orf166-AS1Q96NR2 134 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 SMDT1Q9H4I9 107 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 DNAH8Q96JB1 4490 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 TRAV14DV4A0A0A6YYC5 116 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 IGHV3-73A0A0B4J1V6 119 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 TAX1BP3O14907 124 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 GNG7O60262 68 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 IFNA7P01567 189 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 PRB4P10163 310 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-207ENST00000544052 SUPT4H1P63272 117 aaKnown RBP1.73□□□□□ -2.13
SCFD1-207ENST00000544052 CCL20P78556 96 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 SLC38A11Q08AI6 406 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 CLVS1Q8IUQ0 354 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-207ENST00000544052 CCDC32Q9BV29 185 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 OTORQ9NRC9 128 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 COMMD3Q9UBI1 195 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 MYCBP2O75592 4640 aa1.73□□□□□ -2.13
SCFD1-207ENST00000544052 TRAV2A0A0B4J234 112 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 C3orf85A0A1B0GTC6 90 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 ZNF705FA8MVS1 300 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-207ENST00000544052 M0R378 163 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 SNAPC5O75971 98 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 ZNF705BP0CI00 300 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-207ENST00000544052 S100A11P31949 105 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 FXYD7P58549 80 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 TAS2R30P59541 319 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 SPCS2Q15005 226 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 LINC01554Q52M75 96 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 ZNF705AQ6ZN79 300 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-207ENST00000544052 TERB2Q8NHR7 220 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 S100A16Q96FQ6 103 aaKnown RBP1.72□□□□□ -2.13
SCFD1-207ENST00000544052 PFDN5Q99471 154 aa1.72□□□□□ -2.13
SCFD1-207ENST00000544052 VPS13BQ7Z7G8 4022 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 A0A0J9YX75 114 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 A0A1B0GV90 55 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 DUXBA0A1W2PPF3 345 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 A8MTW9 85 aa1.71□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms