RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 SYS1-DBNDD2H3BUS1 97 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 C3orf79P0CE67 100 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 AKR1D1P51857 326 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 MPV17L2Q567V2 206 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 Q6ZUT4 128 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 UBE2DNLQ8IWF7 75 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 Q8N976 141 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 BAALCQ8WXS3 180 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 VCX2Q9H322 139 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 IGLV4-60A0A075B6I1 120 aa7.29□□□□□ -1.24
DDB1-221ENST00000543162 PMVKQ15126 192 aa7.29□□□□□ -1.24
DDB1-221ENST00000543162 RNASE13Q5GAN3 156 aaKnown RBP7.29□□□□□ -1.24
DDB1-221ENST00000543162 TEX43Q6ZNM6 134 aa7.29□□□□□ -1.24
DDB1-221ENST00000543162 ZNF664Q8N3J9 261 aa7.29□□□□□ -1.24
DDB1-221ENST00000543162 FAM104AQ969W3 186 aa7.29□□□□□ -1.24
DDB1-221ENST00000543162 CDC42SE2Q9NRR3 84 aa7.29□□□□□ -1.24
DDB1-221ENST00000543162 C3orf84H3BNL1 204 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 IGHV3-30P01768 117 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 IGHV3-33P01772 117 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 ANGP03950 147 aaKnown RBP7.28□□□□□ -1.24
DDB1-221ENST00000543162 IGHV3-30-3P0DP02 117 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 IGHV3-30-5P0DP03 117 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 ZC2HC1BQ5TFG8 222 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 PET117Q6UWS5 81 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 SPATA12Q7Z6I5 190 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 Q8N3U1 123 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 C2orf88Q9BSF0 95 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 UPK3BQ9BT76 320 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 CST9LQ9H4G1 147 aa7.28□□□□□ -1.24
DDB1-221ENST00000543162 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
DDB1-221ENST00000543162 C20orf202A1L168 122 aa7.27□□□□□ -1.25
DDB1-221ENST00000543162 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.25
DDB1-221ENST00000543162 SIVA1O15304 175 aa7.27□□□□□ -1.25
DDB1-221ENST00000543162 LINC01556Q5JQF7 62 aa7.27□□□□□ -1.25
DDB1-221ENST00000543162 AMELXQ99217 191 aa7.27□□□□□ -1.25
DDB1-221ENST00000543162 SCGB1D1O95968 90 aa7.26□□□□□ -1.25
DDB1-221ENST00000543162 DNAH10OSP0CZ25 163 aa7.26□□□□□ -1.25
DDB1-221ENST00000543162 ODF1Q14990 250 aa7.26□□□□□ -1.25
DDB1-221ENST00000543162 CASC10Q5T4H9 136 aa7.26□□□□□ -1.25
DDB1-221ENST00000543162 LGALS9CQ6DKI2 356 aa7.26□□□□□ -1.25
DDB1-221ENST00000543162 CHTOPQ9Y3Y2 248 aaKnown RBP7.26□□□□□ -1.25
DDB1-221ENST00000543162 IGKV3OR2-268A0A0C4DH90 116 aa7.25□□□□□ -1.25
DDB1-221ENST00000543162 LINC01545Q5VT33 79 aa7.25□□□□□ -1.25
DDB1-221ENST00000543162 LINC00269Q8N2A0 174 aa7.25□□□□□ -1.25
DDB1-221ENST00000543162 PMCHL2Q9BQD1 86 aa7.25□□□□□ -1.25
DDB1-221ENST00000543162 Q9H8V8 135 aa7.25□□□□□ -1.25
DDB1-221ENST00000543162 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
DDB1-221ENST00000543162 TRAV13-1A0A0B4J241 112 aa7.24□□□□□ -1.25
DDB1-221ENST00000543162 F8VRH5 84 aa7.24□□□□□ -1.25
DDB1-221ENST00000543162 REG3AQ06141 175 aa7.24□□□□□ -1.25
DDB1-221ENST00000543162 JOSD1Q15040 202 aaPredicted RBP7.24□□□□□ -1.25
DDB1-221ENST00000543162 CLPSL2Q6UWE3 100 aa7.24□□□□□ -1.25
DDB1-221ENST00000543162 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
DDB1-221ENST00000543162 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
DDB1-221ENST00000543162 TRAV9-2A0A087WT02 112 aa7.23□□□□□ -1.25
DDB1-221ENST00000543162 DPM2O94777 84 aa7.23□□□□□ -1.25
DDB1-221ENST00000543162 CRPP02741 224 aa7.23□□□□□ -1.25
DDB1-221ENST00000543162 PLNP26678 52 aa7.23□□□□□ -1.25
DDB1-221ENST00000543162 UBE2D1P51668 147 aa7.23□□□□□ -1.25
DDB1-221ENST00000543162 PRR34Q9NV39 138 aa7.23□□□□□ -1.25
DDB1-221ENST00000543162 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 A0A0J9YXV3 536 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 LINC00959A0A1B0GUT2 108 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 SEC11AP67812 179 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 SS18Q15532 418 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 C10orf126Q8N4M7 172 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 UBE2WQ96B02 151 aa7.22□□□□□ -1.25
DDB1-221ENST00000543162 GEMIN7Q9H840 131 aaKnown RBP7.22□□□□□ -1.25
DDB1-221ENST00000543162 TINCRA0A1B0GVN0 87 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 C11orf86A6NJI1 115 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 K7EP13 123 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 CCL25O15444 150 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 IGKCP01834 107 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 IGLC3P0DOY3 106 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 LINC00242Q5T6M2 205 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 ENHOQ6UWT2 76 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 NFE4Q86UQ8 179 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 CHAC1Q9BUX1 264 aa7.21□□□□□ -1.26
DDB1-221ENST00000543162 DNAH7Q8WXX0 4024 aa7.2□□□□□ -1.26
DDB1-221ENST00000543162 IBA57-AS1B1ANH7 110 aa7.2□□□□□ -1.26
DDB1-221ENST00000543162 MIAQ16674 131 aa7.2□□□□□ -1.26
DDB1-221ENST00000543162 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
DDB1-221ENST00000543162 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 IGLV10-54A0A075B6I4 117 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 SMIM6P0DI80 62 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 XCL1P47992 114 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 HERVK_113P63121 156 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 COX6A2Q02221 97 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 TTC32Q5I0X7 151 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 TMEM170BQ5T4T1 132 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 LINC00469Q8N7U9 141 aa7.19□□□□□ -1.26
DDB1-221ENST00000543162 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
DDB1-221ENST00000543162 DYNC2H1Q8NCM8 4307 aaKnown RBP7.18□□□□□ -1.26
DDB1-221ENST00000543162 TRAV8-3A0A0A6YYJ7 113 aa7.18□□□□□ -1.26
DDB1-221ENST00000543162 LY6G6CO95867 125 aa7.18□□□□□ -1.26
DDB1-221ENST00000543162 ZNF22P17026 224 aaPredicted RBP7.18□□□□□ -1.26
DDB1-221ENST00000543162 Q9HAA7 133 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms