RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 MYMXA0A1B0GTQ4 84 aa12.12□□□□□ -0.47
TMEM50B-210ENST00000542230 G3V4G9 280 aa12.12□□□□□ -0.47
TMEM50B-210ENST00000542230 SHISA2Q6UWI4 295 aa12.12□□□□□ -0.47
TMEM50B-210ENST00000542230 SBSPONQ8IVN8 264 aa12.12□□□□□ -0.47
TMEM50B-210ENST00000542230 RETNQ9HD89 108 aa12.12□□□□□ -0.47
TMEM50B-210ENST00000542230 A0A096LPF7 62 aa12.11□□□□□ -0.47
TMEM50B-210ENST00000542230 HSD52Q0P140 79 aa12.11□□□□□ -0.47
TMEM50B-210ENST00000542230 PAPPA-AS1Q5QFB9 102 aa12.11□□□□□ -0.47
TMEM50B-210ENST00000542230 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
TMEM50B-210ENST00000542230 TAX1BP3O14907 124 aa12.1□□□□□ -0.47
TMEM50B-210ENST00000542230 FXYD2P54710 66 aa12.1□□□□□ -0.47
TMEM50B-210ENST00000542230 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
TMEM50B-210ENST00000542230 GCSHP23434 173 aa12.1□□□□□ -0.47
TMEM50B-210ENST00000542230 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
TMEM50B-210ENST00000542230 RNF183Q96D59 192 aa12.1□□□□□ -0.47
TMEM50B-210ENST00000542230 TRAV8-3A0A0A6YYJ7 113 aa12.09□□□□□ -0.47
TMEM50B-210ENST00000542230 A8MZ25 164 aa12.09□□□□□ -0.47
TMEM50B-210ENST00000542230 GYPEP15421 78 aa12.09□□□□□ -0.47
TMEM50B-210ENST00000542230 MRPS36P82909 103 aaKnown RBP12.09□□□□□ -0.47
TMEM50B-210ENST00000542230 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
TMEM50B-210ENST00000542230 HIGD1BQ9P298 99 aa12.09□□□□□ -0.47
TMEM50B-210ENST00000542230 A0A0J9YY99 117 aa12.08□□□□□ -0.47
TMEM50B-210ENST00000542230 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.47
TMEM50B-210ENST00000542230 CRYBA4P53673 196 aa12.08□□□□□ -0.48
TMEM50B-210ENST00000542230 COX6A2Q02221 97 aa12.08□□□□□ -0.48
TMEM50B-210ENST00000542230 PRB2P02812 416 aaPredicted RBP12.07□□□□□ -0.48
TMEM50B-210ENST00000542230 UBE2D1P51668 147 aa12.07□□□□□ -0.48
TMEM50B-210ENST00000542230 HERVK_113P61574 105 aa12.07□□□□□ -0.48
TMEM50B-210ENST00000542230 GAGE6Q13070 117 aa12.07□□□□□ -0.48
TMEM50B-210ENST00000542230 CIDEAO60543 219 aa12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 EGFEM1PQ0D2K5 195 aa12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 NAA38Q9BRA0 125 aaKnown RBP12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 TMEM243Q9BU79 118 aa12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 COX11Q9Y6N1 276 aa12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 LYRM9A8MSI8 78 aa12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 J3QQQ9 107 aa12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
TMEM50B-210ENST00000542230 TRAV13-1A0A0B4J241 112 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 VSIG2Q96IQ7 327 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 TRBV6-8A0A0A6YYG3 113 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 K7ERJ3 54 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 DAD1P61803 113 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 TIMM21Q9BVV7 248 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
TMEM50B-210ENST00000542230 MIFP14174 115 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 SCGB1D4Q6XE38 83 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 LINC00469Q8N7U9 141 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 TINCRA0A1B0GVN0 87 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 HTN3P15516 51 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 RAB37Q96AX2 223 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 PRO0255Q9UI72 69 aa12.04□□□□□ -0.48
TMEM50B-210ENST00000542230 UBE2L6O14933 153 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 NPSP0C0P6 89 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 SEC11AP67812 179 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 LINC00242Q5T6M2 205 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 CEND1Q8N111 149 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 PAX4O43316 350 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 OR5A1Q8NGJ0 315 aa12.03□□□□□ -0.48
TMEM50B-210ENST00000542230 LEPROTO15243 131 aa12.02□□□□□ -0.49
TMEM50B-210ENST00000542230 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.49
TMEM50B-210ENST00000542230 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.49
TMEM50B-210ENST00000542230 IGKV3OR2-268A0A0C4DH90 116 aa12.01□□□□□ -0.49
TMEM50B-210ENST00000542230 TRAV26-1A0A087WT03 109 aa12.01□□□□□ -0.49
TMEM50B-210ENST00000542230 LGALS3P17931 250 aaKnown RBP12.01□□□□□ -0.49
TMEM50B-210ENST00000542230 GEMIN7Q9H840 131 aaKnown RBP12.01□□□□□ -0.49
TMEM50B-210ENST00000542230 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
TMEM50B-210ENST00000542230 TM2D2Q9BX73 214 aa12□□□□□ -0.49
TMEM50B-210ENST00000542230 F5H768 121 aa12□□□□□ -0.49
TMEM50B-210ENST00000542230 PTTG1IPP53801 180 aa12□□□□□ -0.49
TMEM50B-210ENST00000542230 NHP2Q9NX24 153 aaKnown RBP12□□□□□ -0.49
TMEM50B-210ENST00000542230 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
TMEM50B-210ENST00000542230 SPART-AS1P0CW21 52 aa11.99□□□□□ -0.49
TMEM50B-210ENST00000542230 Q8N3U1 123 aa11.99□□□□□ -0.49
TMEM50B-210ENST00000542230 IGHV1-58A0A0C4DH39 117 aa11.98□□□□□ -0.49
TMEM50B-210ENST00000542230 A6NDN8 102 aa11.98□□□□□ -0.49
TMEM50B-210ENST00000542230 ATP5G1P05496 136 aa11.97□□□□□ -0.49
TMEM50B-210ENST00000542230 TMEM101Q96IK0 257 aa11.97□□□□□ -0.49
TMEM50B-210ENST00000542230 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.49
TMEM50B-210ENST00000542230 TIRAPP58753 221 aa11.96□□□□□ -0.49
TMEM50B-210ENST00000542230 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM50B-210ENST00000542230 C12orf74Q32Q52 190 aa11.96□□□□□ -0.49
TMEM50B-210ENST00000542230 TMEM262E9PQX1 116 aa11.95□□□□□ -0.5
TMEM50B-210ENST00000542230 H3BRM9 83 aa11.95□□□□□ -0.5
TMEM50B-210ENST00000542230 H3BUT2 72 aa11.95□□□□□ -0.5
TMEM50B-210ENST00000542230 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
TMEM50B-210ENST00000542230 CCL25O15444 150 aa11.94□□□□□ -0.5
TMEM50B-210ENST00000542230 VAMP3Q15836 100 aa11.94□□□□□ -0.5
TMEM50B-210ENST00000542230 MDFIQ99750 246 aa11.94□□□□□ -0.5
TMEM50B-210ENST00000542230 HUWE1Q7Z6Z7 4374 aaKnown RBP11.94□□□□□ -0.5
TMEM50B-210ENST00000542230 TAL2Q16559 108 aa11.94□□□□□ -0.5
TMEM50B-210ENST00000542230 SMIM13P0DJ93 91 aa11.93□□□□□ -0.5
TMEM50B-210ENST00000542230 CLPSL2Q6UWE3 100 aa11.93□□□□□ -0.5
TMEM50B-210ENST00000542230 A0A0J9YXY3 114 aa11.93□□□□□ -0.5
TMEM50B-210ENST00000542230 H7C423 109 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms