RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
RAP1B-227ENST00000542018 TGIF2-C20orf24A0A0A6YYL0 155 aa11.94□□□□□ -0.5
RAP1B-227ENST00000542018 TMEM136Q6ZRR5 245 aa11.94□□□□□ -0.5
RAP1B-227ENST00000542018 NTM-AS1Q6ZSK4 140 aa11.94□□□□□ -0.5
RAP1B-227ENST00000542018 CBLN2Q8IUK8 224 aa11.94□□□□□ -0.5
RAP1B-227ENST00000542018 A0A087WYN8 130 aa11.93□□□□□ -0.5
RAP1B-227ENST00000542018 SLPIP03973 132 aa11.93□□□□□ -0.5
RAP1B-227ENST00000542018 CHTF8P0CG12 524 aa11.93□□□□□ -0.5
RAP1B-227ENST00000542018 MRPL51Q4U2R6 128 aaKnown RBP11.93□□□□□ -0.5
RAP1B-227ENST00000542018 CLPSL2Q6UWE3 100 aa11.93□□□□□ -0.5
RAP1B-227ENST00000542018 PPBPP02775 128 aa11.92□□□□□ -0.5
RAP1B-227ENST00000542018 MT-ND6P03923 174 aa11.92□□□□□ -0.5
RAP1B-227ENST00000542018 CNBPP62633 177 aaKnown RBP11.92□□□□□ -0.5
RAP1B-227ENST00000542018 LINC01600Q96MT4 127 aa11.92□□□□□ -0.5
RAP1B-227ENST00000542018 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
RAP1B-227ENST00000542018 PPP1R17O96001 155 aa11.91□□□□□ -0.5
RAP1B-227ENST00000542018 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
RAP1B-227ENST00000542018 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
RAP1B-227ENST00000542018 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
RAP1B-227ENST00000542018 RBX1P62877 108 aa11.9□□□□□ -0.5
RAP1B-227ENST00000542018 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
RAP1B-227ENST00000542018 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
RAP1B-227ENST00000542018 PHOX2AO14813 284 aa11.89□□□□□ -0.51
RAP1B-227ENST00000542018 CKS2P33552 79 aa11.89□□□□□ -0.51
RAP1B-227ENST00000542018 APCSP02743 223 aa11.88□□□□□ -0.51
RAP1B-227ENST00000542018 PLAC8Q9NZF1 115 aa11.88□□□□□ -0.51
RAP1B-227ENST00000542018 LPAP08519 4548 aa11.88□□□□□ -0.51
RAP1B-227ENST00000542018 COLCA2A8K830 154 aa11.87□□□□□ -0.51
RAP1B-227ENST00000542018 SCO1O75880 301 aa11.87□□□□□ -0.51
RAP1B-227ENST00000542018 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
RAP1B-227ENST00000542018 GAGE6Q13070 117 aa11.87□□□□□ -0.51
RAP1B-227ENST00000542018 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
RAP1B-227ENST00000542018 NRACQ8N912 160 aa11.87□□□□□ -0.51
RAP1B-227ENST00000542018 LAMTOR2Q9Y2Q5 125 aa11.87□□□□□ -0.51
RAP1B-227ENST00000542018 IGLV10-54A0A075B6I4 117 aa11.86□□□□□ -0.51
RAP1B-227ENST00000542018 IGHV3-64A0A075B6Q5 118 aa11.86□□□□□ -0.51
RAP1B-227ENST00000542018 hDV102S1A0JD36 115 aa11.86□□□□□ -0.51
RAP1B-227ENST00000542018 D6R8Y8 96 aa11.86□□□□□ -0.51
RAP1B-227ENST00000542018 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
RAP1B-227ENST00000542018 SMKR1H3BMG3 65 aa11.85□□□□□ -0.51
RAP1B-227ENST00000542018 NCR2O95944 276 aa11.85□□□□□ -0.51
RAP1B-227ENST00000542018 RPS10P46783 165 aaKnown RBP11.85□□□□□ -0.51
RAP1B-227ENST00000542018 PKIAP61925 76 aa11.85□□□□□ -0.51
RAP1B-227ENST00000542018 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.85□□□□□ -0.51
RAP1B-227ENST00000542018 C20orf78Q9BR46 151 aa11.85□□□□□ -0.51
RAP1B-227ENST00000542018 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
RAP1B-227ENST00000542018 ST20Q9HBF5 79 aa11.85□□□□□ -0.51
RAP1B-227ENST00000542018 TRAPPC1Q9Y5R8 145 aa11.85□□□□□ -0.51
RAP1B-227ENST00000542018 KRTAP10-8P60410 259 aa11.84□□□□□ -0.51
RAP1B-227ENST00000542018 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
RAP1B-227ENST00000542018 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
RAP1B-227ENST00000542018 PRELID3AQ96N28 172 aa11.84□□□□□ -0.51
RAP1B-227ENST00000542018 PRSS47A8MTI9 375 aa11.83□□□□□ -0.52
RAP1B-227ENST00000542018 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
RAP1B-227ENST00000542018 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
RAP1B-227ENST00000542018 REG3AQ06141 175 aa11.83□□□□□ -0.52
RAP1B-227ENST00000542018 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
RAP1B-227ENST00000542018 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
RAP1B-227ENST00000542018 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
RAP1B-227ENST00000542018 SDHAF1A6NFY7 115 aa11.82□□□□□ -0.52
RAP1B-227ENST00000542018 RAB5AP20339 215 aa11.82□□□□□ -0.52
RAP1B-227ENST00000542018 SUMO2P61956 95 aaKnown RBP11.82□□□□□ -0.52
RAP1B-227ENST00000542018 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
RAP1B-227ENST00000542018 C20orf203Q8NBC4 194 aa11.82□□□□□ -0.52
RAP1B-227ENST00000542018 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
RAP1B-227ENST00000542018 VCYO14598 125 aa11.81□□□□□ -0.52
RAP1B-227ENST00000542018 NPYP01303 97 aa11.81□□□□□ -0.52
RAP1B-227ENST00000542018 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
RAP1B-227ENST00000542018 I3L3M4 83 aa11.8□□□□□ -0.52
RAP1B-227ENST00000542018 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
RAP1B-227ENST00000542018 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
RAP1B-227ENST00000542018 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
RAP1B-227ENST00000542018 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
RAP1B-227ENST00000542018 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.78□□□□□ -0.52
RAP1B-227ENST00000542018 C15orf56Q8N910 161 aa11.78□□□□□ -0.52
RAP1B-227ENST00000542018 C7orf33Q8WU49 177 aa11.78□□□□□ -0.52
RAP1B-227ENST00000542018 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
RAP1B-227ENST00000542018 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 TCAPO15273 167 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 PMCHP20382 165 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 COX6A2Q02221 97 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 COTL1Q14019 142 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 SMIM2Q9BVW6 85 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.53
RAP1B-227ENST00000542018 IGHV1-24A0A0C4DH33 117 aa11.76□□□□□ -0.53
RAP1B-227ENST00000542018 TRGC2P03986 189 aa11.75□□□□□ -0.53
RAP1B-227ENST00000542018 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
RAP1B-227ENST00000542018 A0A1B0GUV1 79 aa11.74□□□□□ -0.53
RAP1B-227ENST00000542018 K7EMI3 77 aa11.74□□□□□ -0.53
RAP1B-227ENST00000542018 TSHBP01222 138 aa11.74□□□□□ -0.53
RAP1B-227ENST00000542018 MAJINQ3KP22 176 aa11.74□□□□□ -0.53
RAP1B-227ENST00000542018 Q8N8P6 123 aa11.74□□□□□ -0.53
RAP1B-227ENST00000542018 NXT2Q9NPJ8 142 aaKnown RBP11.74□□□□□ -0.53
RAP1B-227ENST00000542018 IGKV2-24A0A0C4DH68 120 aa11.72□□□□□ -0.53
RAP1B-227ENST00000542018 LOC389332A0A1B0GUA5 103 aa11.72□□□□□ -0.53
RAP1B-227ENST00000542018 SRSF9Q13242 221 aaKnown RBP eCLIP11.72□□□□□ -0.53
RAP1B-227ENST00000542018 STPG4Q8N801 248 aa11.72□□□□□ -0.53
RAP1B-227ENST00000542018 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
RAP1B-227ENST00000542018 ESDP10768 282 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms