RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 IGLV4-60A0A075B6I1 120 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 SIVA1O15304 175 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 HSBP1O75506 76 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 RBX1P62877 108 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 LGALS9CQ6DKI2 356 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 Q8N976 141 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 TOMM6Q96B49 74 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 OPRPNQ99935 248 aaPredicted RBP6.34□□□□□ -1.39
DDX55-208ENST00000541259 Q9H8V8 135 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
DDX55-208ENST00000541259 H7C423 109 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 LY6G6CO95867 125 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 HBDP02042 147 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 PDZD11Q5EBL8 140 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 AMMECR1LQ6DCA0 310 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 LINC00173Q6ZV60 143 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 LINC00476Q8WZB0 136 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 TMEM18Q96B42 140 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 CYSLTR1Q9Y271 337 aa6.33□□□□□ -1.4
DDX55-208ENST00000541259 A0A087WX48 190 aa6.32□□□□□ -1.4
DDX55-208ENST00000541259 IGIPA6NJ69 53 aa6.32□□□□□ -1.4
DDX55-208ENST00000541259 DNAH10OSP0CZ25 163 aa6.32□□□□□ -1.4
DDX55-208ENST00000541259 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
DDX55-208ENST00000541259 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
DDX55-208ENST00000541259 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
DDX55-208ENST00000541259 ZC2HC1BQ5TFG8 222 aa6.32□□□□□ -1.4
DDX55-208ENST00000541259 MRPL52Q86TS9 123 aaKnown RBP6.32□□□□□ -1.4
DDX55-208ENST00000541259 SCGB3A1Q96QR1 104 aa6.32□□□□□ -1.4
DDX55-208ENST00000541259 TIMM21Q9BVV7 248 aa6.32□□□□□ -1.4
DDX55-208ENST00000541259 A0A1B0GUV1 79 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 S100A6P06703 90 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 FABP4P15090 132 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 G0S2P27469 103 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 Q6ZUT4 128 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 SPANXA1Q9NS26 97 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 KLK12Q9UKR0 248 aa6.31□□□□□ -1.4
DDX55-208ENST00000541259 IGLV4-3A0A075B6K6 122 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 C5orf52A6NGY3 159 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 ANGP03950 147 aaKnown RBP6.3□□□□□ -1.4
DDX55-208ENST00000541259 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
DDX55-208ENST00000541259 PKIAP61925 76 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 CLPSL2Q6UWE3 100 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 ERASQ7Z444 233 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 LINC00269Q8N2A0 174 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 ZNF664Q8N3J9 261 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 TMEM101Q96IK0 257 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 PYGO1Q9Y3Y4 419 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 CSDC2Q9Y534 153 aaKnown RBP6.3□□□□□ -1.4
DDX55-208ENST00000541259 RYR2Q92736 4967 aa6.3□□□□□ -1.4
DDX55-208ENST00000541259 KMT2CQ8NEZ4 4911 aaKnown RBP6.3□□□□□ -1.4
DDX55-208ENST00000541259 FRAS1Q86XX4 4008 aa6.29□□□□□ -1.4
DDX55-208ENST00000541259 DNAH17Q9UFH2 4485 aa6.29□□□□□ -1.4
DDX55-208ENST00000541259 IGKV3OR2-268A0A0C4DH90 116 aa6.29□□□□□ -1.4
DDX55-208ENST00000541259 IFITM10A6NMD0 228 aa6.29□□□□□ -1.4
DDX55-208ENST00000541259 M0R2N4 97 aa6.29□□□□□ -1.4
DDX55-208ENST00000541259 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
DDX55-208ENST00000541259 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
DDX55-208ENST00000541259 TIMM17AQ99595 171 aa6.29□□□□□ -1.4
DDX55-208ENST00000541259 NBDYA0A0U1RRE5 68 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 C9orf118A6NHY6 69 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 LINC01549A6NIU2 74 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.28□□□□□ -1.4
DDX55-208ENST00000541259 LEPROTL1O95214 131 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 IFI27L1Q96BM0 104 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 TMEM141Q96I45 108 aa6.28□□□□□ -1.4
DDX55-208ENST00000541259 LCE6AA0A183 80 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 PRSS29PA6NIE9 313 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 IBA57-AS1B1ANH7 110 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 REG3AQ06141 175 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 UBE2WQ96B02 151 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 AMELXQ99217 191 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 HIST1H2BLQ99880 126 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 VCX2Q9H322 139 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 PRR34Q9NV39 138 aa6.27□□□□□ -1.41
DDX55-208ENST00000541259 IGLV10-54A0A075B6I4 117 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 TRAV9-2A0A087WT02 112 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 LINC00959A0A1B0GUT2 108 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 ATP5LO75964 103 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 NPSP0C0P6 89 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 S100A2P29034 98 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 Q6ZN92 141 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 TEX43Q6ZNM6 134 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 Q6ZR54 194 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 SPATA12Q7Z6I5 190 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 CST9LQ9H4G1 147 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 Q9HAA7 133 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
DDX55-208ENST00000541259 TRAV13-1A0A0B4J241 112 aa6.25□□□□□ -1.41
DDX55-208ENST00000541259 H0Y8G0 127 aa6.25□□□□□ -1.41
DDX55-208ENST00000541259 CRPP02741 224 aa6.25□□□□□ -1.41
DDX55-208ENST00000541259 PRSS1P07477 247 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms