RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 XCL1P47992 114 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 UBE2D1P51668 147 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 DEFB103AP81534 67 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 FXYD3Q14802 87 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 ESRGQ1W209 222 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 ZNF818PQ6ZRF7 136 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 MIR17HGQ75NE6 70 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 FAM223AQ8IWN6 122 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 ZCCHC13Q8WW36 166 aaKnown RBP2.61□□□□□ -1.99
YBX3-210ENST00000540975 SRCAPQ6ZRS2 3230 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 KIAA1549Q9HCM3 1950 aa2.61□□□□□ -1.99
YBX3-210ENST00000540975 IGKV1-6A0A0C4DH72 117 aa2.6□□□□□ -1.99
YBX3-210ENST00000540975 MYMXA0A1B0GTQ4 84 aa2.6□□□□□ -1.99
YBX3-210ENST00000540975 KLKP1Q107X0 134 aa2.6□□□□□ -1.99
YBX3-210ENST00000540975 ASB16-AS1Q495Z4 193 aa2.6□□□□□ -1.99
YBX3-210ENST00000540975 LINC00269Q8N2A0 174 aa2.6□□□□□ -1.99
YBX3-210ENST00000540975 RPRMLQ8N4K4 120 aa2.6□□□□□ -1.99
YBX3-210ENST00000540975 DYNLRB1Q9NP97 96 aa2.6□□□□□ -1.99
YBX3-210ENST00000540975 TMSB15BA0A087X1C1 80 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 IGLV3-32A0A0A0MS00 114 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 TRBV7-1A0A0A6YYK4 115 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 SPTY2D1-AS1A0A0U1RR47 76 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 IQCF6A8MYZ5 107 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 C10orf142B7Z368 130 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 CCL5P13501 91 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 MRPL51Q4U2R6 128 aaKnown RBP2.59□□□□□ -1.99
YBX3-210ENST00000540975 IFI27L1Q96BM0 104 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 B9D2Q9BPU9 175 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 TTTY13Q9BZ97 58 aa2.59□□□□□ -1.99
YBX3-210ENST00000540975 HEATR5BQ9P2D3 2071 aa2.59□□□□□ -2
YBX3-210ENST00000540975 A0A0B4J2C4 111 aa2.58□□□□□ -2
YBX3-210ENST00000540975 LINC01546A6NGU7 62 aa2.58□□□□□ -2
YBX3-210ENST00000540975 HIGD1CA8MV81 97 aa2.58□□□□□ -2
YBX3-210ENST00000540975 H3BVH4 76 aa2.58□□□□□ -2
YBX3-210ENST00000540975 K7EMI3 77 aa2.58□□□□□ -2
YBX3-210ENST00000540975 GNRH2O43555 120 aa2.58□□□□□ -2
YBX3-210ENST00000540975 CLPSP04118 112 aa2.58□□□□□ -2
YBX3-210ENST00000540975 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
YBX3-210ENST00000540975 SPANXN5Q5MJ07 72 aa2.58□□□□□ -2
YBX3-210ENST00000540975 SPANXN1Q5VSR9 72 aa2.58□□□□□ -2
YBX3-210ENST00000540975 VMO1Q7Z5L0 202 aa2.58□□□□□ -2
YBX3-210ENST00000540975 C1orf64Q8NEQ6 169 aa2.58□□□□□ -2
YBX3-210ENST00000540975 NDUFA12Q9UI09 145 aa2.58□□□□□ -2
YBX3-210ENST00000540975 U3KQK5 164 aa2.58□□□□□ -2
YBX3-210ENST00000540975 SDK2Q58EX2 2172 aa2.58□□□□□ -2
YBX3-210ENST00000540975 MUC22E2RYF6 1773 aaPredicted RBP2.58□□□□□ -2
YBX3-210ENST00000540975 LTBP2Q14767 1821 aa2.58□□□□□ -2
YBX3-210ENST00000540975 NUMA1Q14980 2115 aa2.57□□□□□ -2
YBX3-210ENST00000540975 IGHV7-4-1A0A0J9YVY3 117 aa2.57□□□□□ -2
YBX3-210ENST00000540975 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
YBX3-210ENST00000540975 FAM223BA6NKX1 122 aa2.57□□□□□ -2
YBX3-210ENST00000540975 STATHP02808 62 aa2.57□□□□□ -2
YBX3-210ENST00000540975 RPL27AP46776 148 aaKnown RBP2.57□□□□□ -2
YBX3-210ENST00000540975 C10orf128Q5T292 105 aa2.57□□□□□ -2
YBX3-210ENST00000540975 ORMDL3Q8N138 153 aa2.57□□□□□ -2
YBX3-210ENST00000540975 DYNLRB2Q8TF09 96 aa2.57□□□□□ -2
YBX3-210ENST00000540975 TMEM141Q96I45 108 aa2.57□□□□□ -2
YBX3-210ENST00000540975 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
YBX3-210ENST00000540975 RETNLBQ9BQ08 111 aa2.57□□□□□ -2
YBX3-210ENST00000540975 BPESC1Q9GZL8 116 aa2.57□□□□□ -2
YBX3-210ENST00000540975 PROK2Q9HC23 129 aa2.57□□□□□ -2
YBX3-210ENST00000540975 TMEM167BQ9NRX6 74 aa2.57□□□□□ -2
YBX3-210ENST00000540975 PTPRBP23467 1997 aa2.57□□□□□ -2
YBX3-210ENST00000540975 SCN3AQ9NY46 2000 aa2.57□□□□□ -2
YBX3-210ENST00000540975 TNRC6BQ9UPQ9 1833 aaKnown RBP2.56□□□□□ -2
YBX3-210ENST00000540975 LOC107984156A0A0G2JMH3 177 aa2.56□□□□□ -2
YBX3-210ENST00000540975 CD24P25063 80 aa2.56□□□□□ -2
YBX3-210ENST00000540975 EDDM3BP56851 147 aa2.56□□□□□ -2
YBX3-210ENST00000540975 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
YBX3-210ENST00000540975 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
YBX3-210ENST00000540975 FAM27BQ5VT28 67 aa2.56□□□□□ -2
YBX3-210ENST00000540975 Q6JHZ5 121 aa2.56□□□□□ -2
YBX3-210ENST00000540975 NDUFA11Q86Y39 141 aa2.56□□□□□ -2
YBX3-210ENST00000540975 ARL17AQ8IVW1 177 aa2.56□□□□□ -2
YBX3-210ENST00000540975 C20orf197Q8N268 126 aa2.56□□□□□ -2
YBX3-210ENST00000540975 KLF14Q8TD94 323 aaPredicted RBP2.56□□□□□ -2
YBX3-210ENST00000540975 TIMM21Q9BVV7 248 aa2.56□□□□□ -2
YBX3-210ENST00000540975 XAGE1AQ9HD64 81 aa2.56□□□□□ -2
YBX3-210ENST00000540975 PHLDA3Q9Y5J5 127 aa2.56□□□□□ -2
YBX3-210ENST00000540975 NCOA6Q14686 2063 aaPredicted RBP2.56□□□□□ -2
YBX3-210ENST00000540975 MYO9BQ13459 2157 aa2.56□□□□□ -2
YBX3-210ENST00000540975 TRAV7A0A075B6U4 112 aa2.55□□□□□ -2
YBX3-210ENST00000540975 IGHV3-72A0A0B4J1Y9 119 aa2.55□□□□□ -2
YBX3-210ENST00000540975 TEX49A0A1B0GTD5 131 aa2.55□□□□□ -2
YBX3-210ENST00000540975 A0A1W2PNN7 141 aa2.55□□□□□ -2
YBX3-210ENST00000540975 LINC01549A6NIU2 74 aa2.55□□□□□ -2
YBX3-210ENST00000540975 E7EUB6 86 aa2.55□□□□□ -2
YBX3-210ENST00000540975 M0R135 149 aa2.55□□□□□ -2
YBX3-210ENST00000540975 IGLV1-51P01701 117 aa2.55□□□□□ -2
YBX3-210ENST00000540975 CGB3P0DN86 165 aa2.55□□□□□ -2
YBX3-210ENST00000540975 CGB7P0DN87 165 aa2.55□□□□□ -2
YBX3-210ENST00000540975 CCL3P10147 92 aa2.55□□□□□ -2
YBX3-210ENST00000540975 CMC4P56277 68 aaPredicted RBP2.55□□□□□ -2
YBX3-210ENST00000540975 NNATQ16517 81 aa2.55□□□□□ -2
YBX3-210ENST00000540975 PIGYQ3MUY2 71 aa2.55□□□□□ -2
YBX3-210ENST00000540975 FAM167A-AS1Q96KT0 104 aa2.55□□□□□ -2
YBX3-210ENST00000540975 TANC2Q9HCD6 1990 aa2.54□□□□□ -2
YBX3-210ENST00000540975 TMEM30CPA0ZSE6 113 aa2.54□□□□□ -2
YBX3-210ENST00000540975 B4DSR2 109 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 506.6 ms