RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RPP21Q9H633 154 aaKnown RBP9.35□□□□□ -0.91
DDX55-206ENST00000539934 LGALS3P17931 250 aaKnown RBP9.35□□□□□ -0.91
DDX55-206ENST00000539934 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
DDX55-206ENST00000539934 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
DDX55-206ENST00000539934 IGLV11-55A0A075B6I3 123 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 H7BZZ5 65 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 Q8N2B8 174 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 FAM167A-AS1Q96KT0 104 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 C11orf68Q9H3H3 251 aaKnown RBP9.33□□□□□ -0.92
DDX55-206ENST00000539934 CFC1BP0CG36 223 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 CFC1P0CG37 223 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 LYZP61626 148 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 FAM223AQ8IWN6 122 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 FANCD2OSQ96PS1 177 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 S4R3C0 116 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 U3KQK5 164 aa9.33□□□□□ -0.92
DDX55-206ENST00000539934 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
DDX55-206ENST00000539934 ECSCRQ19T08 205 aa9.32□□□□□ -0.92
DDX55-206ENST00000539934 LYPD5Q6UWN5 251 aa9.32□□□□□ -0.92
DDX55-206ENST00000539934 LINC00474Q9P2X8 69 aa9.32□□□□□ -0.92
DDX55-206ENST00000539934 H7C423 109 aa9.32□□□□□ -0.92
DDX55-206ENST00000539934 PLNP26678 52 aa9.32□□□□□ -0.92
DDX55-206ENST00000539934 ATP6V0E1O15342 81 aa9.31□□□□□ -0.92
DDX55-206ENST00000539934 EGR2P11161 476 aaPredicted RBP9.31□□□□□ -0.92
DDX55-206ENST00000539934 LINC01356Q8N9X3 169 aa9.31□□□□□ -0.92
DDX55-206ENST00000539934 IGKV1-17P01599 117 aa9.31□□□□□ -0.92
DDX55-206ENST00000539934 C5orf56Q8N8D9 126 aa9.31□□□□□ -0.92
DDX55-206ENST00000539934 Q9H3A6 140 aa9.31□□□□□ -0.92
DDX55-206ENST00000539934 TRBV30A0A0K0K1B3 111 aa9.3□□□□□ -0.92
DDX55-206ENST00000539934 DAD1P61803 113 aa9.3□□□□□ -0.92
DDX55-206ENST00000539934 IGHV3-33P01772 117 aa9.29□□□□□ -0.92
DDX55-206ENST00000539934 XCL1P47992 114 aa9.29□□□□□ -0.92
DDX55-206ENST00000539934 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
DDX55-206ENST00000539934 XCL2Q9UBD3 114 aa9.29□□□□□ -0.92
DDX55-206ENST00000539934 IGHV3-23P01764 117 aa9.29□□□□□ -0.92
DDX55-206ENST00000539934 LY6EQ16553 131 aa9.29□□□□□ -0.92
DDX55-206ENST00000539934 TMEM75Q8N9X5 138 aa9.29□□□□□ -0.92
DDX55-206ENST00000539934 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
DDX55-206ENST00000539934 H3BUX3 64 aa9.28□□□□□ -0.92
DDX55-206ENST00000539934 DAND5Q8N907 189 aa9.28□□□□□ -0.92
DDX55-206ENST00000539934 IBA57-AS1B1ANH7 110 aa9.28□□□□□ -0.92
DDX55-206ENST00000539934 G3V318 75 aa9.28□□□□□ -0.92
DDX55-206ENST00000539934 NDUFS5O43920 106 aa9.28□□□□□ -0.92
DDX55-206ENST00000539934 RIGQ13278 110 aa9.28□□□□□ -0.92
DDX55-206ENST00000539934 PRSS1P07477 247 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 Q6JHZ5 121 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 ZNF491Q8N8L2 437 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 VSIG2Q96IQ7 327 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 ESM1Q9NQ30 184 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 TRBV27A0A0K0K1C4 114 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 RBMY1BA6NDE4 496 aaKnown RBP9.27□□□□□ -0.93
DDX55-206ENST00000539934 RBMY1EA6NEQ0 496 aaKnown RBP9.27□□□□□ -0.93
DDX55-206ENST00000539934 RBMY1DP0C7P1 496 aaKnown RBP9.27□□□□□ -0.93
DDX55-206ENST00000539934 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.93
DDX55-206ENST00000539934 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
DDX55-206ENST00000539934 RHOHQ15669 191 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 C15orf32Q32M92 178 aa9.27□□□□□ -0.93
DDX55-206ENST00000539934 F8W735 103 aaPredicted RBP9.26□□□□□ -0.93
DDX55-206ENST00000539934 M0R378 163 aa9.26□□□□□ -0.93
DDX55-206ENST00000539934 ZNF329Q86UD4 541 aa9.26□□□□□ -0.93
DDX55-206ENST00000539934 FAM223BA6NKX1 122 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 KLKP1Q107X0 134 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
DDX55-206ENST00000539934 A0A1B0GUT8 65 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 A6NDX4 124 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 H3BRN7 92 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 CCL24O00175 119 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
DDX55-206ENST00000539934 BCE1O60756 84 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 CTSGP08311 255 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 ORMDL3Q8N138 153 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 SLC25A29Q8N8R3 303 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 TMEM14CQ9P0S9 112 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 NDUFC1O43677 76 aa9.24□□□□□ -0.93
DDX55-206ENST00000539934 RBM3P98179 157 aaKnown RBP9.24□□□□□ -0.93
DDX55-206ENST00000539934 TMEM263Q8WUH6 116 aaKnown RBP9.24□□□□□ -0.93
DDX55-206ENST00000539934 KLK9Q2XQG4 91 aa9.23□□□□□ -0.93
DDX55-206ENST00000539934 MRPL35Q9NZE8 188 aaKnown RBP9.23□□□□□ -0.93
DDX55-206ENST00000539934 KLK9Q9UKQ9 250 aa9.23□□□□□ -0.93
DDX55-206ENST00000539934 TIMM21Q9BVV7 248 aa9.23□□□□□ -0.93
DDX55-206ENST00000539934 Q9H8V8 135 aa9.23□□□□□ -0.93
DDX55-206ENST00000539934 RYR3Q15413 4870 aa9.22□□□□□ -0.93
DDX55-206ENST00000539934 IGHV3-35A0A0C4DH35 117 aa9.22□□□□□ -0.93
DDX55-206ENST00000539934 DEFB112Q30KQ8 113 aa9.22□□□□□ -0.93
DDX55-206ENST00000539934 CLEC19AQ6UXS0 136 aa9.22□□□□□ -0.93
DDX55-206ENST00000539934 LOC389332A0A1B0GUA5 103 aa9.21□□□□□ -0.94
DDX55-206ENST00000539934 ZNF815PA8K554 130 aa9.21□□□□□ -0.94
DDX55-206ENST00000539934 TRGV3P03979 118 aa9.21□□□□□ -0.94
DDX55-206ENST00000539934 BLCAPP62952 87 aa9.21□□□□□ -0.94
DDX55-206ENST00000539934 C20orf197Q8N268 126 aa9.21□□□□□ -0.94
DDX55-206ENST00000539934 TRAV12-1A0A0B4J245 112 aa9.2□□□□□ -0.94
DDX55-206ENST00000539934 D6R8Y8 96 aa9.2□□□□□ -0.94
DDX55-206ENST00000539934 VCYO14598 125 aa9.2□□□□□ -0.94
DDX55-206ENST00000539934 C19orf54Q5BKX5 351 aa9.2□□□□□ -0.94
DDX55-206ENST00000539934 LINC00588Q9Y4M8 146 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms